BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00000178
         (773 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668...   244   3e-62
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659...   226   9e-57
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   216   7e-54
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           216   7e-54
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   213   4e-53
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...   210   4e-52
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   208   2e-51
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   206   9e-51
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   202   8e-50
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       194   3e-47
ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261...   191   3e-46
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   188   2e-45
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   188   2e-45
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   187   4e-45
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   185   2e-44
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   183   5e-44
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                183   5e-44
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe...   183   6e-44
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256...   183   6e-44
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   181   3e-43

>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
          Length = 603

 Score =  244 bits (622), Expect = 3e-62
 Identities = 115/250 (46%), Positives = 169/250 (67%)
 Frame = +1

Query: 7   SDKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHHSQPTD 186
           +DKC+KFFHA+ KRN    +I+++  EDG  T+S +++    VN++  LF     +Q   
Sbjct: 180 ADKCSKFFHALIKRNIHSRFIAAIRLEDGHKTSSQDEIALAFVNHFRNLFSAHELTQTPS 239

Query: 187 PAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGND 366
            +I   G  +  + +  L    + +EV + +  ++++K+PGPDGF+  FFKK W I+G+D
Sbjct: 240 ISICNRGPKVPIDCFAALLCPTSKQEVWNVISVMDNNKAPGPDGFNVLFFKKAWNIIGDD 299

Query: 367 FLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLS 546
              AV EFF +G++LKQ NHAI+ALIPK      V+ FRPISCC++ YK++SKILA R++
Sbjct: 300 IFEAVNEFFTTGKILKQLNHAIIALIPKHDQASQVNHFRPISCCNLLYKIVSKILANRIA 359

Query: 547 SVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKF 726
            VL  II E Q AF+K + ++DNI L+QE+LR Y  K  SPRC++KIDL KA+DS+SW+F
Sbjct: 360 PVLETIIGETQTAFIKNKKMMDNIFLIQEILRKYAWKRSSPRCLLKIDLHKAYDSISWEF 419

Query: 727 LEEMLKGLDF 756
           L+ MLK + F
Sbjct: 420 LDWMLKSIGF 429


>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
          Length = 964

 Score =  226 bits (575), Expect = 9e-57
 Identities = 108/237 (45%), Positives = 157/237 (66%)
 Frame = +1

Query: 7    SDKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHHSQPTD 186
            +DKC+KFFHA+ KRN    +I+++  EDG  T+S +++    VN++   F     +Q   
Sbjct: 728  ADKCSKFFHALIKRNKHSRFIAAIRLEDGHNTSSQDEIALAFVNHFRNFFSAHELTQTPS 787

Query: 187  PAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGND 366
             +I   G  +  + +  L    + ++V + +  + ++K+PGPDGF+  FFKK W IVG+D
Sbjct: 788  ISICNRGPKVPTDCFAALLCPTSKQKVWNIISVMANNKAPGPDGFNVLFFKKAWNIVGDD 847

Query: 367  FLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLS 546
              AAV EFF +G++LKQ NHAI+ LIPK      V+ FRPISCC++ YK++SKILA R++
Sbjct: 848  IFAAVNEFFTTGKILKQLNHAIIVLIPKHDQASQVNHFRPISCCNLLYKIVSKILANRIA 907

Query: 547  SVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVS 717
             VL  II E Q AF+K R ++DNI L+QE+LR Y RK  SPRC++KIDL KA+D +S
Sbjct: 908  PVLETIIGETQTAFIKNRKMMDNIFLVQEILRKYARKRPSPRCLLKIDLHKAYDFIS 964


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score =  216 bits (550), Expect = 7e-54
 Identities = 110/256 (42%), Positives = 162/256 (63%), Gaps = 2/256 (0%)
 Frame = +1

Query: 10  DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGT--EHHSQPT 183
           D  T +FH M       N I+SL   +G L +S + +    V YYE+L G+     S   
Sbjct: 225 DSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQ 284

Query: 184 DPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGN 363
           +   L      ++++   L    TD+E+ +A K++  +K+ GPDG+S +FF+ TW+I+G 
Sbjct: 285 EDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGP 344

Query: 364 DFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRL 543
           + LAA+ EFF SGQLLKQWN   + LIPKT++  T+S+FRPISC +  YKVISK+L +RL
Sbjct: 345 EVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRL 404

Query: 544 SSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWK 723
             +L  +I  +Q+AF+ GRS+ +N+ L  E++ GYNR  ISPR ++K+DLKKAFDSV W+
Sbjct: 405 QGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWE 464

Query: 724 FLEEMLKGLDFPPLFI 771
           F+   L+ L  P  +I
Sbjct: 465 FVTAALRALAIPERYI 480


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  216 bits (550), Expect = 7e-54
 Identities = 110/256 (42%), Positives = 162/256 (63%), Gaps = 2/256 (0%)
 Frame = +1

Query: 10  DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGT--EHHSQPT 183
           D  T +FH M       N I+SL   +G L +S + +    V YYE+L G+     S   
Sbjct: 225 DSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQ 284

Query: 184 DPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGN 363
           +   L      ++++   L    TD+E+ +A K++  +K+ GPDG+S +FF+ TW+I+G 
Sbjct: 285 EDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGP 344

Query: 364 DFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRL 543
           + LAA+ EFF SGQLLKQWN   + LIPKT++  T+S+FRPISC +  YKVISK+L +RL
Sbjct: 345 EVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRL 404

Query: 544 SSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWK 723
             +L  +I  +Q+AF+ GRS+ +N+ L  E++ GYNR  ISPR ++K+DLKKAFDSV W+
Sbjct: 405 QGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWE 464

Query: 724 FLEEMLKGLDFPPLFI 771
           F+   L+ L  P  +I
Sbjct: 465 FVTAALRALAIPERYI 480


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  213 bits (543), Expect = 4e-53
 Identities = 102/255 (40%), Positives = 156/255 (61%), Gaps = 1/255 (0%)
 Frame = +1

Query: 10   DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHHS-QPTD 186
            D  +K F    K     N I  L  EDG +    ++V +E++ +Y++L GT   +    D
Sbjct: 357  DTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEEILEFYKKLLGTRASTLMGVD 416

Query: 187  PAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGND 366
               +  G+ L+ +  + L  EV   E+  AL  + +DK+PG DGF++ FFKK+W  +  +
Sbjct: 417  LNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQE 476

Query: 367  FLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLS 546
              A ++EFF + ++ +  N  +V L+PK  H   V +FRPI+CC+V YK+ISK+L  R+ 
Sbjct: 477  IYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMK 536

Query: 547  SVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKF 726
             ++G ++NEAQ+ F+ GR I DNI L  EL+RGY RK +SPRCI+K+D++KA+DSV W F
Sbjct: 537  GIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSF 596

Query: 727  LEEMLKGLDFPPLFI 771
            LE +L    FP  F+
Sbjct: 597  LETLLYEFGFPSRFV 611


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score =  210 bits (535), Expect = 4e-52
 Identities = 111/257 (43%), Positives = 156/257 (60%), Gaps = 3/257 (1%)
 Frame = +1

Query: 10   DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYE---QLFGTEHHSQP 180
            DK  K FH  A   A +N I  + +EDGS   + + +  E   +++   QL   ++    
Sbjct: 785  DKNNKTFHRAATARAAQNSIREIQKEDGSTATTKDDIKNETERFFQEFLQLIPNDYEGIT 844

Query: 181  TDPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVG 360
             +          +  E D LTA V+ +E+  AL ++ +DKSPGPDG++S+F+K+ W I+G
Sbjct: 845  VEKLTSLLPYHCSPAEKDMLTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIG 904

Query: 361  NDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATR 540
             +F+ AVK FF  G L K  N  I+ALIPK      + D+RPISCC+V YKVISKI+A R
Sbjct: 905  AEFVLAVKSFFEKGFLPKGVNTTILALIPKKLEAKEMKDYRPISCCNVIYKVISKIIANR 964

Query: 541  LSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSW 720
            L  VL   I   Q+AFVK R +++N+ L  EL++ Y++  IS RC IKID+ KAFDSV W
Sbjct: 965  LKHVLPNFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISGRCAIKIDISKAFDSVQW 1024

Query: 721  KFLEEMLKGLDFPPLFI 771
             FL+ +L  LDFPP F+
Sbjct: 1025 SFLKNVLSALDFPPEFV 1041


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  208 bits (529), Expect = 2e-51
 Identities = 109/259 (42%), Positives = 162/259 (62%), Gaps = 5/259 (1%)
 Frame = +1

Query: 10   DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHHSQPTDP 189
            D  T FFH M       N I  L  + G    + +++    V+++++LFG+  H    + 
Sbjct: 363  DSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLISAEG 422

Query: 190  AILANGQSLNREEWDG-----LTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTI 354
                N  SL R + D      L AEV++ ++ S    +  +KSPGPDG++S+FFKKTW+I
Sbjct: 423  ISQIN--SLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSI 480

Query: 355  VGNDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILA 534
            VG   +AAV+EFF SG+LL QWN   V ++PK  +   +++FRPISCC+  YKVISK+LA
Sbjct: 481  VGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKLLA 540

Query: 535  TRLSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSV 714
             RL ++L   I+ +Q+AFVKGR + +N+ L  EL++G+ +  IS R ++K+DL+KAFDSV
Sbjct: 541  RRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSV 600

Query: 715  SWKFLEEMLKGLDFPPLFI 771
             W F+ E LK  + PP F+
Sbjct: 601  GWGFIIETLKAANAPPRFV 619


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score =  206 bits (523), Expect = 9e-51
 Identities = 105/255 (41%), Positives = 162/255 (63%), Gaps = 1/255 (0%)
 Frame = +1

Query: 10  DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHHSQP-TD 186
           D  TKFFHA AK    +N I  L  EDG+  +    + +E+  +Y +L G+   S P  D
Sbjct: 40  DSNTKFFHAYAKERRCQNNIKFLITEDGTRIDKHNLIKEEIRGFYLKLMGSSVDSLPMVD 99

Query: 187 PAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGND 366
             ++  G  L++ + D L ++ T  EV + L +++  K+PG DG++  FFK +W I+G+ 
Sbjct: 100 KNVVKRGPMLSQHQQDLLCSKFTAVEVKNVLFSMDSSKAPGIDGYNVHFFKCSWNIIGDS 159

Query: 367 FLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLS 546
            + A+ +FF +G + K  N   + L+PK  +  +V +FRPI+CCSV YK+ISKIL +R+ 
Sbjct: 160 VIDAILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRPIACCSVIYKIISKILTSRMQ 219

Query: 547 SVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKF 726
            VL  +++E Q+AFVKGR I DNI L  EL++ Y+RK ISPRC++KIDL+KA++SV W F
Sbjct: 220 GVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYNSVEWPF 279

Query: 727 LEEMLKGLDFPPLFI 771
           ++ ++  L F   F+
Sbjct: 280 IKHLMLELGFSYKFV 294


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  202 bits (515), Expect = 8e-50
 Identities = 103/255 (40%), Positives = 149/255 (58%), Gaps = 1/255 (0%)
 Frame = +1

Query: 10   DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHHS-QPTD 186
            D  +KFF    K    +N I  L  + G       ++  E+ N+Y +L GT     +  D
Sbjct: 360  DSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNEICNFYRRLLGTSSSQLEAID 419

Query: 187  PAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGND 366
              ++  G  L+      L   +T +E+  AL +++D K+PG DGF+S FFKK+W ++  +
Sbjct: 420  LHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAPGLDGFNSVFFKKSWLVIKQE 479

Query: 367  FLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLS 546
                + +FF +G + K  N   V LIPK        D+RPI+CCS  YK+ISKIL  RL 
Sbjct: 480  IYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQ 539

Query: 547  SVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKF 726
            +V+  +++ AQ  F+  R I DNI L  EL+RGYNR+ +SPRC+IK+D++KA+DSV W F
Sbjct: 540  AVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVF 599

Query: 727  LEEMLKGLDFPPLFI 771
            LE MLK L FP +FI
Sbjct: 600  LESMLKELGFPSMFI 614


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  194 bits (493), Expect = 3e-47
 Identities = 106/257 (41%), Positives = 159/257 (61%), Gaps = 3/257 (1%)
 Frame = +1

Query: 10   DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTE---HHSQP 180
            D  TK+FH MA      N IS+L   +G L +S E +     +Y+  L G E   +  + 
Sbjct: 365  DGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLLGDEVDPYLMEQ 424

Query: 181  TDPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVG 360
             D  +L + +    +  + L +  ++E++ +AL ++  +KS GPDGF+++FF  +W+IVG
Sbjct: 425  NDMNLLLSYRCSPAQVCE-LESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVG 483

Query: 361  NDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATR 540
             +   A+KEFF+SG LLKQWN   + LIPK  +    SDFRPISC +  YKVI+++L  R
Sbjct: 484  AEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDR 543

Query: 541  LSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSW 720
            L  +L  +I+ AQ+AF+ GRS+ +N+ L  +L+ GYN   ISPR ++K+DLKKAFDSV W
Sbjct: 544  LQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRW 603

Query: 721  KFLEEMLKGLDFPPLFI 771
            +F+   L+ L  P  FI
Sbjct: 604  EFVIAALRALAIPEKFI 620


>ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261795 [Solanum
           lycopersicum]
          Length = 413

 Score =  191 bits (484), Expect = 3e-46
 Identities = 89/193 (46%), Positives = 133/193 (68%)
 Frame = +1

Query: 193 ILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGNDFL 372
           ++  G   +R++   L  ++T++E+ S L++  +DK+PG DG+++ FFK TW I+  D +
Sbjct: 220 VMKRGPVSSRQQRIQLCTDITEQEIYSTLQSYGNDKAPGIDGYNALFFKHTWKIIKKDVI 279

Query: 373 AAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLSSV 552
            AVK FF +G+L K +N  +V+LIPK     TV ++ PI+CC+V YK+ISK++  R+  V
Sbjct: 280 EAVKNFFTTGKLFKPFNCTLVSLIPKVQCPKTVKEYTPIACCTVLYKIISKVITRRMHDV 339

Query: 553 LGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKFLE 732
           +  +I E+QA F+ GR I DNI L  EL++ Y RK ISPR I+KIDL KA+DSV W FLE
Sbjct: 340 IHDVICESQAGFIPGRKIADNIILAHELVKTYTRKNISPRIILKIDLHKAYDSVEWPFLE 399

Query: 733 EMLKGLDFPPLFI 771
           +++ GL FP +FI
Sbjct: 400 QVMVGLGFPEMFI 412


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  188 bits (478), Expect = 2e-45
 Identities = 99/256 (38%), Positives = 150/256 (58%), Gaps = 3/256 (1%)
 Frame = +1

Query: 10   DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEH---HSQP 180
            D    +FH  A+    +N I  +   +     + E++  E   ++ +    +    H   
Sbjct: 667  DGNNSYFHKAAQVRKMRNSIREIRGPNAETLQTSEEIKGEAERFFNEFLNRQSGDFHGIS 726

Query: 181  TDPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVG 360
             +          +  + + LT EVT EE+   L  + ++KSPGPDG++S+FFK TW++ G
Sbjct: 727  VEDLRNLMSYRCSVTDQNILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTG 786

Query: 361  NDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATR 540
             DF+AA++ FF  G L K  N  I+ALIPK      + D+RPISCC+V YKVISKILA R
Sbjct: 787  PDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANR 846

Query: 541  LSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSW 720
            L  +L   I + Q+AFVK R +++N+ L  EL++ Y+++ ++PRC +KID+ KAFDSV W
Sbjct: 847  LKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQW 906

Query: 721  KFLEEMLKGLDFPPLF 768
            +FL   L+ L+FP  F
Sbjct: 907  QFLLNTLEALNFPETF 922


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  188 bits (477), Expect = 2e-45
 Identities = 99/257 (38%), Positives = 147/257 (57%), Gaps = 3/257 (1%)
 Frame = +1

Query: 10  DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGT---EHHSQP 180
           D+  K FH         N I  +   DG +  S + +  E VNY++    T   ++    
Sbjct: 91  DRNNKTFHRAITTREAVNSIREIVTRDGLVVTSQQDIQTEAVNYFQDFLQTIPADYEGMC 150

Query: 181 TDPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVG 360
            +          + ++   LT  VT EE+   + ++  DKSPGPDG++S+F+K +W I+G
Sbjct: 151 VEELENLLPFRCSEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIG 210

Query: 361 NDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATR 540
           ++ + A++ FFA G L K  N  I+ALIPK      + D+RPISCC+V YK ISKILA R
Sbjct: 211 DEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANR 270

Query: 541 LSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSW 720
           L  +L   I   Q+AFVK R +++N+ L  EL++ Y++  IS RC +KID+ KAFDS+ W
Sbjct: 271 LKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQW 330

Query: 721 KFLEEMLKGLDFPPLFI 771
            FL  +L  ++FP  FI
Sbjct: 331 SFLTHVLAAMNFPGEFI 347


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  187 bits (474), Expect = 4e-45
 Identities = 98/256 (38%), Positives = 151/256 (58%), Gaps = 3/256 (1%)
 Frame = +1

Query: 10   DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYE---QLFGTEHHSQP 180
            D+  K FH        +N I  +   DGS+ +  E++  E  +++    QL   +     
Sbjct: 258  DRNNKAFHRAVVAREAQNSIREIICHDGSVASQEEKIKTEAEHHFREFLQLIPNDFEGIA 317

Query: 181  TDPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVG 360
             +          +  + + LT  V+ EE+   + ++ +DKSPGPDG++++F+K  W I+G
Sbjct: 318  VEELQDLLPYRCSDSDKEMLTNHVSAEEIHKVVFSMPNDKSPGPDGYTAEFYKGAWNIIG 377

Query: 361  NDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATR 540
             +F+ A++ FFA G L K  N  I+ALIPK      + D+RPISCC+V YKVISKI+A R
Sbjct: 378  AEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANR 437

Query: 541  LSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSW 720
            L  VL   I   Q+AFVK R +++N+ L  E+++ Y++  +S RC +KID+ KAFDSV W
Sbjct: 438  LKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQW 497

Query: 721  KFLEEMLKGLDFPPLF 768
            KFL  +L+ ++FPP F
Sbjct: 498  KFLINVLEAMNFPPEF 513


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  185 bits (469), Expect = 2e-44
 Identities = 105/257 (40%), Positives = 141/257 (54%), Gaps = 3/257 (1%)
 Frame = +1

Query: 10   DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYE---QLFGTEHHSQP 180
            D+ TK FH  A      N I  +   DG +    +++  E   ++    QL   +     
Sbjct: 370  DQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAERFFREFLQLIPNDFEGVT 429

Query: 181  TDPAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVG 360
                        +  +   L   VT EE+   L  +  DKSPGPDG++S+FFK TW I+G
Sbjct: 430  ITELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIG 489

Query: 361  NDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATR 540
            ++F  AV+ FF  G L K  N  I+ALIPK T    + D+RPISCC+V YKVISKI+A R
Sbjct: 490  DEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANR 549

Query: 541  LSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSW 720
            L  VL   I   Q+AFVK R +++N+ L  EL++ Y++  IS RC IKID+ KAFDSV W
Sbjct: 550  LKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQW 609

Query: 721  KFLEEMLKGLDFPPLFI 771
             FL  +   L FP  FI
Sbjct: 610  PFLINVFTILGFPREFI 626


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  183 bits (465), Expect = 5e-44
 Identities = 97/255 (38%), Positives = 147/255 (57%), Gaps = 2/255 (0%)
 Frame = +1

Query: 10   DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHHSQPTDP 189
            D  + +FH MA      N+I  L+   G      + +    V Y++   G+E      + 
Sbjct: 262  DMNSSYFHKMASARQSLNHIHFLSDPVGDRIEGQQNLENHCVEYFQSNLGSEQGLPLFEQ 321

Query: 190  AILANGQSL--NREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGN 363
            A ++N  S   +  +   L    + E++ +A  ++  +K+ GPDGFS +FF   W I+G 
Sbjct: 322  ADISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIGG 381

Query: 364  DFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRL 543
            +   A+ EFF SG+LLKQWN   + LIPK T+  ++SDFRPISC +  YKVISK+L  RL
Sbjct: 382  EVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRPISCLNTVYKVISKLLTDRL 441

Query: 544  SSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWK 723
               L   I+ +Q+AF+ GR  ++N+ L  EL+ GYN+K I+P  ++K+DL+KAFDSV W 
Sbjct: 442  KDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWD 501

Query: 724  FLEEMLKGLDFPPLF 768
            F+   L+ L+ P  F
Sbjct: 502  FIVSALRALNVPEKF 516


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  183 bits (465), Expect = 5e-44
 Identities = 92/179 (51%), Positives = 122/179 (68%)
 Frame = +1

Query: 232 DGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGNDFLAAVKEFFASGQLL 411
           D LT EVT EE    L  +  +K PGPDG++S+FFK TW+I G DF+AA+K FF  G L 
Sbjct: 20  DMLTREVTSEENQKVLFAMPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLP 79

Query: 412 KQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLSSVLGPIINEAQAAFV 591
           K  N  I+ALIPK      + D+RPISCC+V YKVISKI+A RL  +L   I + Q+AFV
Sbjct: 80  KGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFV 139

Query: 592 KGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKFLEEMLKGLDFPPLF 768
           + R +++N+ L  EL++ Y++  ISPRC +KID+ KAFDSV W+FL   L+ L+FP  F
Sbjct: 140 RERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENF 198


>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
          Length = 1496

 Score =  183 bits (464), Expect = 6e-44
 Identities = 103/256 (40%), Positives = 152/256 (59%), Gaps = 2/256 (0%)
 Frame = +1

Query: 10   DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHHSQPTDP 189
            D+ +KFFH  A    ++N IS+L  E G    + + + + +VNY++ LF +   S+ T+ 
Sbjct: 712  DRNSKFFHYKASSRRRRNTISALEDEHGHWQTTEQGLTQTVVNYFQHLFSSTGSSEYTEV 771

Query: 190  AILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGNDF 369
                 G+ +  E    L A  T EE+  AL  +   K+PGPDGFS  F++K W IVG D 
Sbjct: 772  VDGVRGR-VTEEMNQALLAVFTPEEIKIALFQMHPSKAPGPDGFSPFFYQKYWPIVGEDV 830

Query: 370  LAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLSS 549
            +AAV  FF +G+LLK+ N   VALIPK      +   RPIS C+V YK+ +K+L TRL +
Sbjct: 831  VAAVLHFFKTGKLLKRINFTHVALIPKVHEPKNMMQLRPISLCNVLYKIGAKVLTTRLKA 890

Query: 550  VLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPR--CIIKIDLKKAFDSVSWK 723
            +L  +I++ Q+AFV GR+I DN  +  ELL   ++K    +    +KID+ KA+D V W 
Sbjct: 891  ILPTLISDTQSAFVPGRAISDNSIVAFELLHMMHKKNQGRQGYLALKIDMSKAYDRVEWS 950

Query: 724  FLEEMLKGLDFPPLFI 771
            FLE ++KG+ F P +I
Sbjct: 951  FLEALMKGMGFAPRWI 966


>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
           lycopersicum]
          Length = 421

 Score =  183 bits (464), Expect = 6e-44
 Identities = 90/253 (35%), Positives = 148/253 (58%)
 Frame = +1

Query: 10  DKCTKFFHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHHSQPTDP 189
           D   K+F ++ K   +  +I ++    G +    +++  E+V +Y+ L GT         
Sbjct: 53  DANNKYFSSVIKERTQNKHIRNILSIHGRMLYEPQEIQDEVVLFYKSLMGT--------- 103

Query: 190 AILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVGNDF 369
                             + VT+E++ +AL+++ +DK+PG DG+++ FFK TW I+ ND 
Sbjct: 104 ------------------SAVTEEKIFAALQSIGNDKAPGIDGYNAFFFKYTWKIIKNDI 145

Query: 370 LAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATRLSS 549
           +  V+ FF  G+L K +N  +V+LIPK      V ++R I+CC+V YK+ISK++  R+  
Sbjct: 146 IEVVQSFFKPGKLFKPFNCTLVSLIPKVQSPKNVKEYRTITCCTVLYKIISKVITNRMHD 205

Query: 550 VLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSWKFL 729
           V+  +I ++Q  F+ GR I +NI L  EL+  Y RK ISPR ++KIDL+K +DSV W FL
Sbjct: 206 VIHNVICDSQVGFILGRKISENILLAHELVNSYTRKNISPRSMLKIDLQKVYDSVEWPFL 265

Query: 730 EEMLKGLDFPPLF 768
           ++++ GL FP +F
Sbjct: 266 KQVMVGLGFPDMF 278


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  181 bits (458), Expect = 3e-43
 Identities = 100/257 (38%), Positives = 145/257 (56%), Gaps = 9/257 (3%)
 Frame = +1

Query: 28   FHAMAKRNAKKNYISSLTREDGSLTNSLEQVGKELVNYYEQLFGTEHHSQPTD------- 186
            F    K     N I  +    G+   + + +  E V ++  L      SQP+D       
Sbjct: 642  FERWEKERHLLNAIHEVMDPQGTRPPNQDDIKIEAVRFFSDLLS----SQPSDFTGISVD 697

Query: 187  --PAILANGQSLNREEWDGLTAEVTDEEVLSALKNVEDDKSPGPDGFSSKFFKKTWTIVG 360
                IL    SL+ +    L AE+T+ EV+    ++  +KSPGPDG++ +FF++TW+++G
Sbjct: 698  ELKGILQYRYSLHEQNL--LVAEITEAEVMKVFFSIPLNKSPGPDGYTVEFFRETWSVIG 755

Query: 361  NDFLAAVKEFFASGQLLKQWNHAIVALIPKTTHEPTVSDFRPISCCSVFYKVISKILATR 540
             +   A+K FF  G L K  N  I+ALIPK T+   + D+RPISCC+V YK ISK+LA R
Sbjct: 756  QEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYAKEMKDYRPISCCNVLYKAISKLLANR 815

Query: 541  LSSVLGPIINEAQAAFVKGRSIVDNIHLMQELLRGYNRKWISPRCIIKIDLKKAFDSVSW 720
            L  +L   I   Q+AF+  R +++N+ L  EL++ Y++  +SPRC +KIDL KAFDSV W
Sbjct: 816  LKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQW 875

Query: 721  KFLEEMLKGLDFPPLFI 771
             FL   L  LD P  FI
Sbjct: 876  PFLLNTLAALDIPEKFI 892