BLASTX nr result
ID: Rauwolfia21_contig00056125
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00056125 (337 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668... 94 2e-17 ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670... 80 3e-13 ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, part... 56 4e-06 gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 55 1e-05 >ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max] Length = 477 Score = 94.0 bits (232), Expect = 2e-17 Identities = 45/111 (40%), Positives = 61/111 (54%) Frame = +2 Query: 5 DSALFKRLLHVRYVLFANERSVDAVVHKLSSWVMGTTCCMDKAYDYFRTKELGVPWSRIV 184 DS L K+++H+R ++ E +V+A L+SW KAYDY R + V W+ +V Sbjct: 261 DSVLIKKIIHIRDIITIKEDNVEAAKQTLNSWNSNEQLLAGKAYDYIRGVKPAVNWNSVV 320 Query: 185 WNKANKPKHSFVCWLAVNQRLATLDKFPFLPDDSLCSFCKCCLEIHAHLFF 337 WN A K SF+ WLA L TLD+ FL LC C+ + HAHLFF Sbjct: 321 WNPAIPSKMSFILWLATKNHLLTLDRAAFLNKGLLCPLCRTKAKSHAHLFF 371 >ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max] Length = 383 Score = 80.1 bits (196), Expect = 3e-13 Identities = 39/103 (37%), Positives = 51/103 (49%) Frame = +2 Query: 29 LHVRYVLFANERSVDAVVHKLSSWVMGTTCCMDKAYDYFRTKELGVPWSRIVWNKANKPK 208 +H+R ++ + E +++ L+SW K YDY R V WS I+WN K Sbjct: 240 IHIRDIIISKEENIEVAKLMLNSWGCNEQTLAGKMYDYIRGTRPVVHWSSIIWNPVIPSK 299 Query: 209 HSFVCWLAVNQRLATLDKFPFLPDDSLCSFCKCCLEIHAHLFF 337 SF+ WLA RL LD+ FL LC C E HAHLFF Sbjct: 300 MSFILWLATKNRLLALDRAAFLNKGFLCPLCTNEAESHAHLFF 342 >ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, partial [Populus trichocarpa] gi|550329025|gb|ERP55952.1| hypothetical protein POPTR_0010s04250g, partial [Populus trichocarpa] Length = 112 Score = 56.2 bits (134), Expect = 4e-06 Identities = 31/83 (37%), Positives = 40/83 (48%) Frame = +2 Query: 89 LSSWVMGTTCCMDKAYDYFRTKELGVPWSRIVWNKANKPKHSFVCWLAVNQRLATLDKFP 268 LSSW AY +F K V W+ +VW + P+H+F WL +L T D+ Sbjct: 2 LSSWHSRPGSFTANAYHFFTYKVDHVQWASVVWEQWFLPRHNFSLWLL--GKLRTRDRLQ 59 Query: 269 FLPDDSLCSFCKCCLEIHAHLFF 337 F+ D L C E HAHLFF Sbjct: 60 FISTDPLYPLCHNSSESHAHLFF 82 >gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis thaliana] Length = 323 Score = 55.1 bits (131), Expect = 1e-05 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Frame = +2 Query: 164 VPWSRIVWNKANKPKHSFVCWLAVNQRLATLDKFP--FLPDDSLCSFCKCCLEIHAHLFF 337 VPW + VW K PKH+F+CW+A +RL T D+ L ++C C E H HLFF Sbjct: 152 VPWQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFF 211