BLASTX nr result

ID: Rauwolfia21_contig00056125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00056125
         (337 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668...    94   2e-17
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670...    80   3e-13
ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, part...    56   4e-06
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    55   1e-05

>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
          Length = 477

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 45/111 (40%), Positives = 61/111 (54%)
 Frame = +2

Query: 5   DSALFKRLLHVRYVLFANERSVDAVVHKLSSWVMGTTCCMDKAYDYFRTKELGVPWSRIV 184
           DS L K+++H+R ++   E +V+A    L+SW         KAYDY R  +  V W+ +V
Sbjct: 261 DSVLIKKIIHIRDIITIKEDNVEAAKQTLNSWNSNEQLLAGKAYDYIRGVKPAVNWNSVV 320

Query: 185 WNKANKPKHSFVCWLAVNQRLATLDKFPFLPDDSLCSFCKCCLEIHAHLFF 337
           WN A   K SF+ WLA    L TLD+  FL    LC  C+   + HAHLFF
Sbjct: 321 WNPAIPSKMSFILWLATKNHLLTLDRAAFLNKGLLCPLCRTKAKSHAHLFF 371


>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
          Length = 383

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 39/103 (37%), Positives = 51/103 (49%)
 Frame = +2

Query: 29  LHVRYVLFANERSVDAVVHKLSSWVMGTTCCMDKAYDYFRTKELGVPWSRIVWNKANKPK 208
           +H+R ++ + E +++     L+SW         K YDY R     V WS I+WN     K
Sbjct: 240 IHIRDIIISKEENIEVAKLMLNSWGCNEQTLAGKMYDYIRGTRPVVHWSSIIWNPVIPSK 299

Query: 209 HSFVCWLAVNQRLATLDKFPFLPDDSLCSFCKCCLEIHAHLFF 337
            SF+ WLA   RL  LD+  FL    LC  C    E HAHLFF
Sbjct: 300 MSFILWLATKNRLLALDRAAFLNKGFLCPLCTNEAESHAHLFF 342


>ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, partial [Populus
           trichocarpa] gi|550329025|gb|ERP55952.1| hypothetical
           protein POPTR_0010s04250g, partial [Populus trichocarpa]
          Length = 112

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/83 (37%), Positives = 40/83 (48%)
 Frame = +2

Query: 89  LSSWVMGTTCCMDKAYDYFRTKELGVPWSRIVWNKANKPKHSFVCWLAVNQRLATLDKFP 268
           LSSW          AY +F  K   V W+ +VW +   P+H+F  WL    +L T D+  
Sbjct: 2   LSSWHSRPGSFTANAYHFFTYKVDHVQWASVVWEQWFLPRHNFSLWLL--GKLRTRDRLQ 59

Query: 269 FLPDDSLCSFCKCCLEIHAHLFF 337
           F+  D L   C    E HAHLFF
Sbjct: 60  FISTDPLYPLCHNSSESHAHLFF 82


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +2

Query: 164 VPWSRIVWNKANKPKHSFVCWLAVNQRLATLDKFP--FLPDDSLCSFCKCCLEIHAHLFF 337
           VPW + VW K   PKH+F+CW+A  +RL T D+     L   ++C  C    E H HLFF
Sbjct: 152 VPWQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFF 211


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