BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00054996
         (309 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...   111   9e-23
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   110   2e-22
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   109   3e-22
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   109   3e-22
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]   109   3e-22
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]   109   3e-22
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]   107   2e-21
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   106   4e-21
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   104   1e-20
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   104   1e-20
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   104   1e-20
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...   103   2e-20
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   102   4e-20
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   102   4e-20
gb|AAT40486.1| putative polyprotein [Solanum demissum]                102   7e-20
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   102   7e-20
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   101   9e-20
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   100   3e-19
emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]    97   3e-18
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...    96   5e-18

>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score =  111 bits (278), Expect = 9e-23
 Identities = 47/72 (65%), Positives = 58/72 (80%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           GS PSYS + TFGCLCYAH  ++ +DKF  RSRRC+F+GYP+GKKGWRL+DLE  +F VS
Sbjct: 717 GSRPSYSALRTFGCLCYAHYRARDKDKFSERSRRCVFVGYPYGKKGWRLYDLEKNKFFVS 776

Query: 182 RDVIFYEDQFPF 217
           RDV+F E  FP+
Sbjct: 777 RDVVFQETVFPY 788


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  110 bits (275), Expect = 2e-22
 Identities = 47/72 (65%), Positives = 58/72 (80%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G+ PSY+ IHTFGCL +AH      DKF +RSR+C+F+GYPFGKKGW+LFDL+T+E  VS
Sbjct: 479 GTPPSYAAIHTFGCLSFAHDXKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVS 538

Query: 182 RDVIFYEDQFPF 217
           RDV F+ED FPF
Sbjct: 539 RDVKFFEDVFPF 550


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  109 bits (273), Expect = 3e-22
 Identities = 47/72 (65%), Positives = 58/72 (80%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G+ PSY+ IHTFGCL +AH      DKF +RSR+C+F+GYPFGKKGW+LFDL+T+E  VS
Sbjct: 393 GTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVS 452

Query: 182 RDVIFYEDQFPF 217
           RDV F+ED FPF
Sbjct: 453 RDVKFFEDVFPF 464


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  109 bits (273), Expect = 3e-22
 Identities = 47/72 (65%), Positives = 58/72 (80%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G+ PSY+ IHTFGCL +AH      DKF +RSR+C+F+GYPFGKKGW+LFDL+T+E  VS
Sbjct: 726 GTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVS 785

Query: 182 RDVIFYEDQFPF 217
           RDV F+ED FPF
Sbjct: 786 RDVKFFEDVFPF 797


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score =  109 bits (273), Expect = 3e-22
 Identities = 46/72 (63%), Positives = 60/72 (83%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G +PSY +I TFGCLCYAH  ++ +DKF +RSR+CIF+GYPFGKKGWRL+DLE+ E+ VS
Sbjct: 537 GQAPSYKHIXTFGCLCYAHDQNRDKDKFASRSRKCIFVGYPFGKKGWRLYDLESGEYFVS 596

Query: 182 RDVIFYEDQFPF 217
           R+VIF E +F +
Sbjct: 597 RBVIFVEAEFSY 608


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score =  109 bits (273), Expect = 3e-22
 Identities = 47/72 (65%), Positives = 58/72 (80%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G+ PSY+ IHTFGCL +AH      DKF +RSR+C+F+GYPFGKKGW+LFDL+T+E  VS
Sbjct: 438 GTPPSYAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVS 497

Query: 182 RDVIFYEDQFPF 217
           RDV F+ED FPF
Sbjct: 498 RDVKFFEDVFPF 509


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score =  107 bits (266), Expect = 2e-21
 Identities = 46/72 (63%), Positives = 57/72 (79%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G+ PSY+ IHTFGCL +AH      DKF +RSR+C+F+GYPFGKKGW+L DL+T+E  VS
Sbjct: 606 GTPPSYAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLGYPFGKKGWKLXDLDTKELFVS 665

Query: 182 RDVIFYEDQFPF 217
           RDV F+ED FPF
Sbjct: 666 RDVKFFEDVFPF 677


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  106 bits (264), Expect = 4e-21
 Identities = 45/73 (61%), Positives = 56/73 (76%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           GS P YS +  FG  CY HR ++ +DKF  RSR CIF+GYPFGKKGW+++D+E  EFLVS
Sbjct: 741 GSKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVS 800

Query: 182 RDVIFYEDQFPFA 220
           RDVIF E+ FP+A
Sbjct: 801 RDVIFREEVFPYA 813


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  104 bits (260), Expect = 1e-20
 Identities = 45/72 (62%), Positives = 58/72 (80%)
 Frame = +2

Query: 5   SSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVSR 184
           ++P+YS++  FG LCYAH  +   DKF ARSRRC+F+GYP G+KGWRLFDLE Q+F VSR
Sbjct: 505 TAPNYSHLRVFGSLCYAHNQNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSR 564

Query: 185 DVIFYEDQFPFA 220
           DVIF E +FP++
Sbjct: 565 DVIFQETEFPYS 576


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  104 bits (260), Expect = 1e-20
 Identities = 45/72 (62%), Positives = 57/72 (79%)
 Frame = +2

Query: 5   SSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVSR 184
           ++P YS++  FG LCYAH  +   DKF ARSRRC+F+GYP G+KGWRLFDLE Q+F VSR
Sbjct: 505 TAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSR 564

Query: 185 DVIFYEDQFPFA 220
           DVIF E +FP++
Sbjct: 565 DVIFQETEFPYS 576


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  104 bits (260), Expect = 1e-20
 Identities = 45/72 (62%), Positives = 57/72 (79%)
 Frame = +2

Query: 5   SSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVSR 184
           ++P YS++  FG LCYAH  +   DKF ARSRRC+F+GYP G+KGWRLFDLE Q+F VSR
Sbjct: 729 TAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSR 788

Query: 185 DVIFYEDQFPFA 220
           DVIF E +FP++
Sbjct: 789 DVIFQETEFPYS 800


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score =  103 bits (257), Expect = 2e-20
 Identities = 42/72 (58%), Positives = 56/72 (77%)
 Frame = +2

Query: 5   SSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVSR 184
           S P+Y ++  FG  CY HR S+ +DKF  RSR C+F+GYPF +KGW++FD+E +EFLVSR
Sbjct: 303 SKPNYEHLRVFGSACYVHRASRDKDKFGERSRLCVFIGYPFAQKGWKVFDMEKKEFLVSR 362

Query: 185 DVIFYEDQFPFA 220
           DV+F ED FP+A
Sbjct: 363 DVVFREDVFPYA 374


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  102 bits (255), Expect = 4e-20
 Identities = 42/73 (57%), Positives = 55/73 (75%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G  P Y  +  FG  CYAHR ++ +DKF  RSR CIF+GYPFG+KGW+++DL T EF+VS
Sbjct: 724 GCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVS 783

Query: 182 RDVIFYEDQFPFA 220
           RDV+F E+ FP+A
Sbjct: 784 RDVVFRENVFPYA 796


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  102 bits (255), Expect = 4e-20
 Identities = 42/73 (57%), Positives = 55/73 (75%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G  P Y  +  FG  CYAHR ++ +DKF  RSR CIF+GYPFG+KGW+++DL T EF+VS
Sbjct: 724 GCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVS 783

Query: 182 RDVIFYEDQFPFA 220
           RDV+F E+ FP+A
Sbjct: 784 RDVVFRENVFPYA 796


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score =  102 bits (253), Expect = 7e-20
 Identities = 43/73 (58%), Positives = 56/73 (76%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G  PSY  +  FGC+C+AH  S+ +DKF ++SR+CIF+GYPFGKKGWR++DLET +  VS
Sbjct: 555 GKEPSYKPLKVFGCICFAHLKSRDKDKFGSKSRQCIFLGYPFGKKGWRVYDLETGDLYVS 614

Query: 182 RDVIFYEDQFPFA 220
           RDV F E  FP+A
Sbjct: 615 RDVTFDEKIFPYA 627


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  102 bits (253), Expect = 7e-20
 Identities = 43/71 (60%), Positives = 54/71 (76%)
 Frame = +2

Query: 11  PSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVSRDV 190
           P + ++  FG LCYAH  ++G DKF  RSRRC+F+GYP G+KGWRLFDLE  EF VSRDV
Sbjct: 607 PRFDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFVGYPHGQKGWRLFDLEQNEFFVSRDV 666

Query: 191 IFYEDQFPFAV 223
           +F E +FPF +
Sbjct: 667 VFSELEFPFRI 677


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  101 bits (252), Expect = 9e-20
 Identities = 44/72 (61%), Positives = 53/72 (73%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G  P+Y ++  FG LCYAH+ S+  DKF  RSRRC F GYP+GKKGW+L DLET+E   S
Sbjct: 603 GEKPNYEHLRVFGSLCYAHKKSRSNDKFDXRSRRCXFXGYPYGKKGWKLXDLETKEQFES 662

Query: 182 RDVIFYEDQFPF 217
           RDVIF+E  FPF
Sbjct: 663 RDVIFHETIFPF 674


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 41/73 (56%), Positives = 55/73 (75%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G  PSY  + +FGCLCYAH   + +DKF +RSR+C+F+GYP GKK WR++DLET +   S
Sbjct: 714 GERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFAS 773

Query: 182 RDVIFYEDQFPFA 220
           RDV F+ED +P+A
Sbjct: 774 RDVRFHEDIYPYA 786


>emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]
          Length = 758

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 40/62 (64%), Positives = 52/62 (83%)
 Frame = +2

Query: 2   GSSPSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVS 181
           G +PSY +I TFGCLCYAH  ++ +DKF +RSR+CIF+ YPFGKKGW+L+DLE+ E+ VS
Sbjct: 417 GQAPSYKHIRTFGCLCYAHDQNRDKDKFSSRSRKCIFVRYPFGKKGWQLYDLESSEYSVS 476

Query: 182 RD 187
           RD
Sbjct: 477 RD 478


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 40/70 (57%), Positives = 54/70 (77%)
 Frame = +2

Query: 11  PSYSNIHTFGCLCYAHRCSKGQDKFHARSRRCIFMGYPFGKKGWRLFDLETQEFLVSRDV 190
           PSY+++  FG LC+A + +   DKF  R R+CIF+GYP G+KGWR++D+E+Q F VSRDV
Sbjct: 731 PSYASLRVFGSLCFARKHTGRLDKFQERGRKCIFVGYPHGQKGWRIYDIESQIFFVSRDV 790

Query: 191 IFYEDQFPFA 220
           +F ED FPFA
Sbjct: 791 VFQEDIFPFA 800