BLASTX nr result
ID: Rauwolfia21_contig00054954
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00054954
(370 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006470453.1| PREDICTED: F-box/kelch-repeat protein At3g23... 57 7e-08
gb|EMJ25440.1| hypothetical protein PRUPE_ppa018335mg [Prunus pe... 58 1e-06
ref|XP_004237710.1| PREDICTED: putative F-box protein At3g10430-... 52 1e-06
ref|XP_004237711.1| PREDICTED: putative F-box protein At3g10430-... 52 1e-06
ref|XP_006356325.1| PREDICTED: F-box/kelch-repeat protein At3g23... 52 1e-06
ref|XP_006356327.1| PREDICTED: F-box/kelch-repeat protein At3g23... 52 1e-06
ref|XP_003595512.1| F-box protein [Medicago truncatula] gi|35548... 58 1e-06
ref|XP_006494373.1| PREDICTED: F-box protein At2g21930-like [Cit... 52 2e-06
ref|XP_006431732.1| hypothetical protein CICLE_v10003993mg, part... 52 2e-06
ref|XP_006431461.1| hypothetical protein CICLE_v10003888mg [Citr... 52 2e-06
ref|XP_006356320.1| PREDICTED: F-box protein At3g08750-like isof... 51 3e-06
ref|XP_006431738.1| hypothetical protein CICLE_v10003618mg, part... 52 3e-06
ref|XP_006586599.1| PREDICTED: F-box/kelch-repeat protein At3g23... 57 3e-06
ref|XP_006489260.1| PREDICTED: F-box/kelch-repeat protein At3g23... 56 4e-06
ref|XP_006419562.1| hypothetical protein CICLE_v10006734mg [Citr... 56 4e-06
ref|XP_004237712.1| PREDICTED: F-box/kelch-repeat protein At3g23... 51 5e-06
ref|XP_006431735.1| hypothetical protein CICLE_v10003520mg, part... 52 6e-06
ref|XP_006494376.1| PREDICTED: F-box protein At1g30790-like [Cit... 52 7e-06
ref|XP_006381824.1| hypothetical protein POPTR_0006s18580g [Popu... 55 7e-06
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat... 55 7e-06
>ref|XP_006470453.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Citrus
sinensis]
Length = 379
Score = 56.6 bits (135), Expect(2) = 7e-08
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = -1
Query: 364 IMNKMSSYLAEDIIIEILSRLPVKSLLRFRCVCKEWLEIIES 239
IM + ED+++EILS+ PVKSLLRFRCVCK W E+ ES
Sbjct: 15 IMATNNGNFFEDMVVEILSKFPVKSLLRFRCVCKSWYELFES 56
Score = 25.4 bits (54), Expect(2) = 7e-08
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 243 SPAFFSNHFNRETNQSRLLVRYC-XXXXXXXPRCRLALFTDKDL 115
SP+F S H + +RL++RY PR R LF D L
Sbjct: 56 SPSFISKHLKAGNSNTRLILRYVDSSDDPEFPRLRDCLFLDPTL 99
>gb|EMJ25440.1| hypothetical protein PRUPE_ppa018335mg [Prunus persica]
Length = 369
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = -1
Query: 355 KMSSYLAEDIIIEILSRLPVKSLLRFRCVCKEWLEIIESS 236
K S Y+ E+I+I+IL RLPVKSL+RF CVCK W ++IESS
Sbjct: 7 KNSIYIPEEILIDILLRLPVKSLVRFMCVCKSWRDLIESS 46
>ref|XP_004237710.1| PREDICTED: putative F-box protein At3g10430-like isoform 1 [Solanum
lycopersicum]
Length = 425
Score = 52.0 bits (123), Expect(2) = 1e-06
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = -1
Query: 340 LAEDIIIEILSRLPVKSLLRFRCVCKEWLEIIES 239
L ED++++IL RLPV+SLLRF+CVCK W +I+S
Sbjct: 30 LPEDLVVDILLRLPVESLLRFKCVCKHWYALIKS 63
Score = 25.8 bits (55), Expect(2) = 1e-06
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 243 SPAFFSNHFNRETNQSRLLV 184
SP+F HF+ + N +RLLV
Sbjct: 63 SPSFIEKHFHHKNNCARLLV 82
>ref|XP_004237711.1| PREDICTED: putative F-box protein At3g10430-like isoform 2 [Solanum
lycopersicum]
Length = 402
Score = 52.0 bits (123), Expect(2) = 1e-06
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = -1
Query: 340 LAEDIIIEILSRLPVKSLLRFRCVCKEWLEIIES 239
L ED++++IL RLPV+SLLRF+CVCK W +I+S
Sbjct: 7 LPEDLVVDILLRLPVESLLRFKCVCKHWYALIKS 40
Score = 25.8 bits (55), Expect(2) = 1e-06
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 243 SPAFFSNHFNRETNQSRLLV 184
SP+F HF+ + N +RLLV
Sbjct: 40 SPSFIEKHFHHKNNCARLLV 59
>ref|XP_006356325.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform X1
[Solanum tuberosum] gi|565379840|ref|XP_006356326.1|
PREDICTED: F-box/kelch-repeat protein At3g23880-like
isoform X2 [Solanum tuberosum]
Length = 401
Score = 52.0 bits (123), Expect(2) = 1e-06
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = -1
Query: 340 LAEDIIIEILSRLPVKSLLRFRCVCKEWLEIIES 239
L ED++++IL RLPV+SLLRF+CVCK W +I+S
Sbjct: 7 LPEDLVVDILLRLPVESLLRFKCVCKHWYALIKS 40
Score = 25.8 bits (55), Expect(2) = 1e-06
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 243 SPAFFSNHFNRETNQSRLLV 184
SP+F HF+ + N +RLLV
Sbjct: 40 SPSFIEKHFHHKNNCARLLV 59
>ref|XP_006356327.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform X3
[Solanum tuberosum]
Length = 394
Score = 52.0 bits (123), Expect(2) = 1e-06
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = -1
Query: 340 LAEDIIIEILSRLPVKSLLRFRCVCKEWLEIIES 239
L ED++++IL RLPV+SLLRF+CVCK W +I+S
Sbjct: 7 LPEDLVVDILLRLPVESLLRFKCVCKHWYALIKS 40
Score = 25.8 bits (55), Expect(2) = 1e-06
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 243 SPAFFSNHFNRETNQSRLLV 184
SP+F HF+ + N +RLLV
Sbjct: 40 SPSFIEKHFHHKNNCARLLV 59
>ref|XP_003595512.1| F-box protein [Medicago truncatula] gi|355484560|gb|AES65763.1|
F-box protein [Medicago truncatula]
Length = 342
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -1
Query: 361 MNKMSSYLAEDIIIEILSRLPVKSLLRFRCVCKEWLEII 245
M KMS YL E++I EIL RLPVK+LLR RCVCK WL II
Sbjct: 1 MEKMSVYLPEEVIKEILLRLPVKTLLRCRCVCKLWLSII 39
>ref|XP_006494373.1| PREDICTED: F-box protein At2g21930-like [Citrus sinensis]
Length = 623
Score = 52.4 bits (124), Expect(2) = 2e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -1
Query: 334 EDIIIEILSRLPVKSLLRFRCVCKEWLEI 248
EDI IEILSRLP K +LRFRCVCK WLE+
Sbjct: 11 EDITIEILSRLPAKFVLRFRCVCKSWLEL 39
Score = 25.0 bits (53), Expect(2) = 2e-06
Identities = 22/89 (24%), Positives = 31/89 (34%), Gaps = 9/89 (10%)
Frame = -2
Query: 240 PAFFSNHFNRETNQSRLLVR---YCXXXXXXXPRCRLALFTDKDLKG------TPHLHED 88
P+F S HF + ++RL V L LF D+ L P +H+
Sbjct: 43 PSFISRHFQNNSTRTRLFVDASVSSTVFGRGIVTSALYLFHDEKLANLSYEDIKPQIHDK 102
Query: 87 FQGTPPHLHEDFLDQLEKTEIFGPVNRLF 1
F G L + I+ P R F
Sbjct: 103 FVGYHDGLFCIMQSSTNRLTIWNPATREF 131
>ref|XP_006431732.1| hypothetical protein CICLE_v10003993mg, partial [Citrus clementina]
gi|557533854|gb|ESR44972.1| hypothetical protein
CICLE_v10003993mg, partial [Citrus clementina]
Length = 356
Score = 52.4 bits (124), Expect(2) = 2e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -1
Query: 334 EDIIIEILSRLPVKSLLRFRCVCKEWLEI 248
EDI IEILSRLP K +LRFRCVCK WLE+
Sbjct: 11 EDITIEILSRLPAKFVLRFRCVCKSWLEL 39
Score = 25.0 bits (53), Expect(2) = 2e-06
Identities = 22/89 (24%), Positives = 31/89 (34%), Gaps = 9/89 (10%)
Frame = -2
Query: 240 PAFFSNHFNRETNQSRLLVR---YCXXXXXXXPRCRLALFTDKDLKG------TPHLHED 88
P+F S HF + ++RL V L LF D+ L P +H+
Sbjct: 43 PSFISKHFQNNSTRTRLFVDASVTSAVVGMGIVTSALYLFHDEKLANLSYEDIKPQIHDK 102
Query: 87 FQGTPPHLHEDFLDQLEKTEIFGPVNRLF 1
F G L + I+ P R F
Sbjct: 103 FVGYHDGLFCIMQSSTNRLTIWNPATREF 131
>ref|XP_006431461.1| hypothetical protein CICLE_v10003888mg [Citrus clementina]
gi|557533583|gb|ESR44701.1| hypothetical protein
CICLE_v10003888mg [Citrus clementina]
Length = 353
Score = 52.0 bits (123), Expect(2) = 2e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = -1
Query: 328 IIIEILSRLPVKSLLRFRCVCKEWLEIIES 239
+++EILS+ PVKSLLRFRCVCK W E+ ES
Sbjct: 1 MVVEILSKFPVKSLLRFRCVCKSWYELFES 30
Score = 25.4 bits (54), Expect(2) = 2e-06
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 243 SPAFFSNHFNRETNQSRLLVRYC-XXXXXXXPRCRLALFTDKDL 115
SP+F S H + +RL++RY PR R LF D L
Sbjct: 30 SPSFISKHLKAGNSNTRLILRYVDSSDDPEFPRLRDCLFLDPTL 73
>ref|XP_006356320.1| PREDICTED: F-box protein At3g08750-like isoform X1 [Solanum
tuberosum] gi|565379830|ref|XP_006356321.1| PREDICTED:
F-box protein At3g08750-like isoform X2 [Solanum
tuberosum]
Length = 380
Score = 51.2 bits (121), Expect(2) = 3e-06
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = -1
Query: 343 YLAEDIIIEILSRLPVKSLLRFRCVCKEWLEIIES 239
+L ED+++++L RLPV+SLLRF+CVCK W +I S
Sbjct: 6 HLPEDLLVDVLLRLPVESLLRFKCVCKHWYALITS 40
Score = 25.4 bits (54), Expect(2) = 3e-06
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 249 LLSPAFFSNHFNRETNQSRLLV 184
+ SP+F HF+ + N +RLL+
Sbjct: 38 ITSPSFIEMHFHHKHNHARLLI 59
>ref|XP_006431738.1| hypothetical protein CICLE_v10003618mg, partial [Citrus clementina]
gi|557533860|gb|ESR44978.1| hypothetical protein
CICLE_v10003618mg, partial [Citrus clementina]
Length = 363
Score = 52.4 bits (124), Expect(2) = 3e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -1
Query: 334 EDIIIEILSRLPVKSLLRFRCVCKEWLEI 248
EDI IEILSRLP K +LRFRCVCK WLE+
Sbjct: 11 EDITIEILSRLPAKFVLRFRCVCKSWLEL 39
Score = 24.3 bits (51), Expect(2) = 3e-06
Identities = 22/89 (24%), Positives = 31/89 (34%), Gaps = 9/89 (10%)
Frame = -2
Query: 240 PAFFSNHFNRETNQSRLLVR---YCXXXXXXXPRCRLALFTDKDLKG------TPHLHED 88
P+F S HF + ++RL V L LF D+ L P +H+
Sbjct: 43 PSFISKHFQNNSTRTRLFVDASVSSTVFGRGIVTSALYLFHDEKLANLSYEDIKPQIHDV 102
Query: 87 FQGTPPHLHEDFLDQLEKTEIFGPVNRLF 1
F G L + I+ P R F
Sbjct: 103 FVGYHDGLFCIMQSSTNRLTIWNPATREF 131
>ref|XP_006586599.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
Length = 395
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = -1
Query: 346 SYLAEDIIIEILSRLPVKSLLRFRCVCKEWLEII 245
SY+ +D+I+EILSRLPVK L+RFRCVCK W II
Sbjct: 8 SYVPDDLIVEILSRLPVKDLMRFRCVCKTWKSII 41
>ref|XP_006489260.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Citrus
sinensis]
Length = 437
Score = 56.2 bits (134), Expect = 4e-06
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = -1
Query: 346 SYLAEDIIIEILSRLPVKSLLRFRCVCKEWLEII 245
S L +D++IE+LSRLPVKSLLRF+C CK+WL +I
Sbjct: 2 SNLPDDVLIEVLSRLPVKSLLRFKCACKQWLSLI 35
>ref|XP_006419562.1| hypothetical protein CICLE_v10006734mg [Citrus clementina]
gi|557521435|gb|ESR32802.1| hypothetical protein
CICLE_v10006734mg [Citrus clementina]
Length = 437
Score = 56.2 bits (134), Expect = 4e-06
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = -1
Query: 346 SYLAEDIIIEILSRLPVKSLLRFRCVCKEWLEII 245
S L +D++IE+LSRLPVKSLLRF+C CK+WL +I
Sbjct: 2 SNLPDDVLIEVLSRLPVKSLLRFKCACKQWLSLI 35
>ref|XP_004237712.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
lycopersicum]
Length = 373
Score = 50.8 bits (120), Expect(2) = 5e-06
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = -1
Query: 340 LAEDIIIEILSRLPVKSLLRFRCVCKEWLEIIES 239
L EDI+++IL RLPV+ LLRF+CVCK W +I+S
Sbjct: 7 LPEDIVVDILLRLPVEPLLRFKCVCKHWYALIKS 40
Score = 25.0 bits (53), Expect(2) = 5e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 243 SPAFFSNHFNRETNQSRLLV 184
S +F HF+ + N+SRLL+
Sbjct: 40 SESFIEKHFHHKNNRSRLLI 59
>ref|XP_006431735.1| hypothetical protein CICLE_v10003520mg, partial [Citrus clementina]
gi|557533857|gb|ESR44975.1| hypothetical protein
CICLE_v10003520mg, partial [Citrus clementina]
Length = 275
Score = 52.4 bits (124), Expect(2) = 6e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -1
Query: 334 EDIIIEILSRLPVKSLLRFRCVCKEWLEI 248
EDI IEILSRLP K +LRFRCVCK WLE+
Sbjct: 11 EDITIEILSRLPAKFVLRFRCVCKSWLEL 39
Score = 23.1 bits (48), Expect(2) = 6e-06
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 240 PAFFSNHFNRETNQSRLLV 184
P+F S HF + ++RL V
Sbjct: 43 PSFISKHFQNNSTRTRLFV 61
>ref|XP_006494376.1| PREDICTED: F-box protein At1g30790-like [Citrus sinensis]
Length = 84
Score = 52.4 bits (124), Expect(2) = 7e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -1
Query: 334 EDIIIEILSRLPVKSLLRFRCVCKEWLEI 248
EDI IEILSRLP K +LRFRCVCK WLE+
Sbjct: 11 EDITIEILSRLPAKFVLRFRCVCKSWLEL 39
Score = 23.1 bits (48), Expect(2) = 7e-06
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 240 PAFFSNHFNRETNQSRLLV 184
P+F S HF + ++RL V
Sbjct: 43 PSFISKHFQNNSTKTRLFV 61
>ref|XP_006381824.1| hypothetical protein POPTR_0006s18580g [Populus trichocarpa]
gi|550336580|gb|ERP59621.1| hypothetical protein
POPTR_0006s18580g [Populus trichocarpa]
Length = 441
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/43 (60%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Frame = -1
Query: 364 IMNKMSSY-LAEDIIIEILSRLPVKSLLRFRCVCKEWLEIIES 239
+M M+ + L ED++IEILSRLPVK+LL+F+CVCK W II S
Sbjct: 33 VMATMTGHPLPEDVVIEILSRLPVKNLLQFKCVCKSWYAIITS 75
>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
[Medicago truncatula]
Length = 366
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = -1
Query: 343 YLAEDIIIEILSRLPVKSLLRFRCVCKEWLEIIES 239
+L E++I+EIL +LP+KSLLRFRCVCK WL II +
Sbjct: 7 FLPEELILEILIKLPIKSLLRFRCVCKSWLHIISN 41