BLASTX nr result

ID: Rauwolfia21_contig00054786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00054786
         (289 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237752.1| PREDICTED: putative F-box/kelch-repeat prote...    56   4e-06

>ref|XP_004237752.1| PREDICTED: putative F-box/kelch-repeat protein At1g12870-like
           [Solanum lycopersicum]
          Length = 215

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = -2

Query: 279 DNCLALWNPATR*MRHLQHPNITLPSRWSLPFQTFGFGFDCQGNDYKVVWLRQYYENKRE 100
           D CL LWNPATR  R L      + S +S   Q +G GFD    DYKVVWLR  +++   
Sbjct: 108 DVCLGLWNPATREFRSLSPAPFEIESFFSHHNQQYGLGFDLLTLDYKVVWLRGLWDDLGL 167

Query: 99  SPCFVEATC-YSLAKDSW 49
                   C YSL  +SW
Sbjct: 168 GDYNRVYVCVYSLCNNSW 185


Top