BLASTX nr result
ID: Rauwolfia21_contig00054588
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00054588
(382 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW04489.1| NADH dehydrogenase subunit 4 [Astephanus triflorus] 60 3e-10
ref|YP_001671732.1| NADH dehydrogenase subunit 4 [Carica papaya]... 53 2e-08
ref|YP_004021369.1| NADH-plastoquinone oxidoreductase subunit 4 ... 52 3e-08
gb|ACB29190.1| NADH dehydrogenase subunit D [Perezia purpurata] 52 3e-08
gb|ACB29152.1| NADH dehydrogenase subunit D [Doniophyton anomalum] 52 3e-08
gb|ACB29154.1| NADH dehydrogenase subunit D [Echinops ritro] 51 3e-08
gb|AGW04946.1| NADH dehydrogenase subunit 4 [Telosma cordata] 62 4e-08
gb|AGW04638.1| NADH dehydrogenase subunit 4 [Marsdenia astephano... 62 4e-08
ref|YP_538990.1| NADH dehydrogenase subunit 4 [Gossypium hirsutu... 52 6e-08
ref|YP_008992946.1| NADH-plastoquinone oxidoreductase subunit 4 ... 52 6e-08
ref|YP_008992859.1| NADH-plastoquinone oxidoreductase subunit 4 ... 52 6e-08
ref|YP_008992773.1| NADH-plastoquinone oxidoreductase subunit 4 ... 52 6e-08
ref|YP_008992687.1| NADH-plastoquinone oxidoreductase subunit 4 ... 52 6e-08
ref|YP_008992601.1| NADH-plastoquinone oxidoreductase subunit 4 ... 52 6e-08
ref|YP_008992514.1| NADH-plastoquinone oxidoreductase subunit 4 ... 52 6e-08
gb|ACB29146.1| NADH dehydrogenase subunit D [Dasyphyllum reticul... 51 6e-08
ref|YP_008082782.1| NADH-plastoquinone oxidoreductase subunit 4 ... 52 7e-08
gb|ACB29187.1| NADH dehydrogenase subunit D [Osteospermum asperu... 51 7e-08
gb|ACB29141.1| NADH dehydrogenase subunit D [Chrysanthemoides mo... 51 7e-08
ref|YP_005087746.1| NADH dehydrogenase subunit 4 (chloroplast) [... 51 9e-08
>gb|AGW04489.1| NADH dehydrogenase subunit 4 [Astephanus triflorus]
Length = 500
Score = 59.7 bits (143), Expect(2) = 3e-10
Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = +1
Query: 25 TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
T I+VFPIS GSLIFFL H N LV W+ +C CI E LL V T CYH
Sbjct: 8 TIIVVFPISAGSLIFFLPHRGNRLVRWYTLCICILELLLTVYTFCYH 54
Score = 30.4 bits (67), Expect(2) = 3e-10
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI 217
C H+ +D L+QLLEDYKWI
Sbjct: 52 CYHF-----QADDPLIQLLEDYKWI 71
>ref|YP_001671732.1| NADH dehydrogenase subunit 4 [Carica papaya]
gi|193806221|sp|B1A984.1|NU4C_CARPA RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|166344187|gb|ABY86837.1| NADH-plastoquinone
oxidoreductase subunit 4 [Carica papaya]
Length = 500
Score = 52.8 bits (125), Expect(2) = 2e-08
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 25 TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
T I+V PIS GSLIFFL H N ++ W+ IC C+ E LL CYH
Sbjct: 8 TIIVVLPISAGSLIFFLPHRGNKVIRWYTICICVLELLLTTYAFCYH 54
Score = 31.2 bits (69), Expect(2) = 2e-08
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D LVQL EDYKWI F+ F + + I+
Sbjct: 52 CYHFQL-----DDPLVQLTEDYKWINFFDFYWRLGID 83
>ref|YP_004021369.1| NADH-plastoquinone oxidoreductase subunit 4 [Theobroma cacao]
gi|309321319|gb|ADO64862.1| NADH-plastoquinone
oxidoreductase subunit 4 [Theobroma cacao]
gi|328924828|gb|ADO64939.2| NADH-plastoquinone
oxidoreductase subunit 4 [Theobroma cacao]
gi|371925984|gb|AEX57774.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Theobroma cacao]
gi|371926066|gb|AEX57855.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Theobroma cacao]
gi|371926148|gb|AEX57936.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Theobroma cacao]
gi|371926230|gb|AEX58017.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Theobroma cacao]
gi|371926312|gb|AEX58098.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Theobroma cacao]
gi|371926394|gb|AEX58179.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Theobroma cacao]
gi|371926476|gb|AEX58260.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Theobroma cacao]
gi|371926558|gb|AEX58341.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Theobroma cacao]
gi|371926640|gb|AEX58422.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Theobroma cacao]
gi|371926722|gb|AEX58503.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Theobroma
grandiflorum] gi|371926804|gb|AEX58584.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Theobroma cacao]
Length = 500
Score = 52.0 bits (123), Expect(2) = 3e-08
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 25 TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
T I+V PI GSLIFFL H N L+ W+ IC CI E LL CYH
Sbjct: 8 TIIVVLPIFAGSLIFFLPHRGNKLIKWYTICICIFELLLTTYAFCYH 54
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL+EDYKWI F+ F + + I+
Sbjct: 52 CYHFRL-----DDPLIQLVEDYKWINFFDFYWRVGID 83
>gb|ACB29190.1| NADH dehydrogenase subunit D [Perezia purpurata]
Length = 500
Score = 52.0 bits (123), Expect(2) = 3e-08
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 25 TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
T I+VFPI GSLIFFL H N ++ W+ IC C+ E LL CYH
Sbjct: 8 TIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICMLELLLTTYAFCYH 54
Score = 31.2 bits (69), Expect(2) = 3e-08
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL+EDYKWI F+ F + + I+
Sbjct: 52 CYHFQL-----DDPLIQLVEDYKWINFFDFRWKLGID 83
>gb|ACB29152.1| NADH dehydrogenase subunit D [Doniophyton anomalum]
Length = 500
Score = 52.0 bits (123), Expect(2) = 3e-08
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Frame = +1
Query: 16 SFP--TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
+FP T I+V PI GSLIFFL H N ++ W+ IC C+ E LL T CYH
Sbjct: 3 NFPWLTIIVVLPIFAGSLIFFLPHKGNRVIRWYTICICMLELLLTTYTFCYH 54
Score = 31.2 bits (69), Expect(2) = 3e-08
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL+EDYKWI F+ F + + I+
Sbjct: 52 CYHFQL-----DDPLIQLVEDYKWINFFDFRWKLGID 83
>gb|ACB29154.1| NADH dehydrogenase subunit D [Echinops ritro]
Length = 500
Score = 51.2 bits (121), Expect(2) = 3e-08
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 25 TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
T I+V PI GSLIFFL H N ++ W+ IC C+ E LL LCYH
Sbjct: 8 TIIVVLPIFAGSLIFFLPHKGNRVIRWYTICICMLELLLTTYALCYH 54
Score = 32.0 bits (71), Expect(2) = 3e-08
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 140 MCVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
+C H+ + +D L+QL+EDYKWI F+ F + + I+
Sbjct: 51 LCYHFQL-----DDPLIQLVEDYKWINFFDFRWKLGID 83
>gb|AGW04946.1| NADH dehydrogenase subunit 4 [Telosma cordata]
Length = 500
Score = 61.6 bits (148), Expect(2) = 4e-08
Identities = 31/50 (62%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +1
Query: 25 TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYHVHP 171
T I+VFPIS GSLIFFL H N +V W+ IC CI E LL V T CYH P
Sbjct: 8 TIIVVFPISAGSLIFFLPHRGNRVVRWYTICICILELLLTVYTFCYHFQP 57
Score = 21.2 bits (43), Expect(2) = 4e-08
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 249 RVGIDGLSVVP 281
R+GIDGLS+ P
Sbjct: 79 RLGIDGLSIGP 89
>gb|AGW04638.1| NADH dehydrogenase subunit 4 [Marsdenia astephanoides]
Length = 500
Score = 61.6 bits (148), Expect(2) = 4e-08
Identities = 31/50 (62%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +1
Query: 25 TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYHVHP 171
T I+VFPIS GSLIFFL H N +V W+ IC CI E LL V T CYH P
Sbjct: 8 TIIVVFPISAGSLIFFLPHRGNRVVRWYTICICILELLLTVYTFCYHFQP 57
Score = 21.2 bits (43), Expect(2) = 4e-08
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 249 RVGIDGLSVVP 281
R+GIDGLS+ P
Sbjct: 79 RLGIDGLSIGP 89
>ref|YP_538990.1| NADH dehydrogenase subunit 4 [Gossypium hirsutum]
gi|119368549|ref|YP_913236.1| NADH dehydrogenase ND4
subunit [Gossypium barbadense]
gi|325210975|ref|YP_004286053.1| NADH-plastoquinone
oxidoreductase subunit 4 [Gossypium thurberi]
gi|372291081|ref|YP_005087842.1| NADH dehydrogenase
subunit 4 (chloroplast) [Gossypium darwinii]
gi|372291437|ref|YP_005088333.1| NADH dehydrogenase
subunit 4 (chloroplast) [Gossypium tomentosum]
gi|372291535|ref|YP_005088429.1| NADH dehydrogenase
subunit 4 (chloroplast) [Gossypium herbaceum subsp.
africanum] gi|372291823|ref|YP_005088969.1| NADH
dehydrogenase subunit 4 (chloroplast) [Gossypium
mustelinum] gi|372291907|ref|YP_005089052.1| NADH
dehydrogenase subunit 4 (chloroplast) [Gossypium
arboreum] gi|386800888|ref|YP_006303544.1| NADH
dehydrogenase subunit 4 (chloroplast) [Gossypium
gossypioides] gi|394830677|ref|YP_006503330.1| NADH
dehydrogenase subunit 4 (chloroplast) [Gossypium
incanum] gi|394830764|ref|YP_006503413.1| NADH
dehydrogenase subunit 4 (chloroplast) [Gossypium
somalense] gi|394830850|ref|YP_006503496.1| NADH
dehydrogenase subunit 4 (chloroplast) [Gossypium
capitis-viridis] gi|394830939|ref|YP_006503579.1| NADH
dehydrogenase subunit 4 (chloroplast) [Gossypium
areysianum] gi|394831026|ref|YP_006503662.1| NADH
dehydrogenase subunit 4 (chloroplast) [Gossypium
robinsonii] gi|122238620|sp|Q2L955.1|NU4C_GOSHI RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|125956573|sp|A0ZZ85.1|NU4C_GOSBA RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|85687470|gb|ABC73682.1| NADH-plastoquinone
oxidoreductase subunit 4 [Gossypium hirsutum]
gi|119224911|dbj|BAF41297.1| NADH dehydrogenase ND4
subunit [Gossypium barbadense]
gi|290775837|gb|ADD62333.1| NADH-plastoquinone
oxidoreductase subunit 4 [Gossypium thurberi]
gi|318084366|gb|ADV38842.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium arboreum]
gi|318084449|gb|ADV38924.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium darwinii]
gi|318084536|gb|ADV39010.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium herbaceum subsp. africanum]
gi|318084618|gb|ADV39091.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium mustelinum]
gi|318084788|gb|ADV39259.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium tomentosum]
gi|329317122|gb|AEB90481.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium gossypioides]
gi|329317206|gb|AEB90564.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium hirsutum]
gi|329317290|gb|AEB90647.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium hirsutum]
gi|329317374|gb|AEB90730.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium barbadense]
gi|329317458|gb|AEB90813.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium barbadense]
gi|329317542|gb|AEB90896.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium barbadense]
gi|335354382|gb|AEH43002.1| NADH dehydrogenase subunit 4
[Gossypium incanum] gi|335354466|gb|AEH43085.1| NADH
dehydrogenase subunit 4 [Gossypium somalense]
gi|335354550|gb|AEH43168.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium capitis-viridis]
gi|335354634|gb|AEH43251.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium areysianum]
gi|335354718|gb|AEH43334.1| NADH dehydrogenase subunit 4
[Gossypium robinsonii]
Length = 500
Score = 52.0 bits (123), Expect(2) = 6e-08
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 28 TILVF-PISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
TI+VF PIS GSL+FFL H N L+ W+ IC CI E LL CYH
Sbjct: 8 TIIVFLPISAGSLLFFLPHKGNKLIKWYTICICILELLLTTYAFCYH 54
Score = 30.4 bits (67), Expect(2) = 6e-08
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL EDYKWI F+ F + + I+
Sbjct: 52 CYHFRL-----DDPLIQLAEDYKWINFFDFYWRLGID 83
>ref|YP_008992946.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Gossypium sturtianum] gi|326457528|gb|ADZ74787.1|
NADH-plastoquinone oxidoreductase subunit 4 [Gossypium
sturtianum]
Length = 500
Score = 52.0 bits (123), Expect(2) = 6e-08
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 28 TILVF-PISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
TI+VF PIS GSL+FFL H N L+ W+ IC CI E LL CYH
Sbjct: 8 TIIVFLPISAGSLLFFLPHKGNKLIKWYTICICIFELLLTTYAFCYH 54
Score = 30.4 bits (67), Expect(2) = 6e-08
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL EDYKWI F+ F + + I+
Sbjct: 52 CYHFRL-----DDPLIQLAEDYKWINFFDFYWRLGID 83
>ref|YP_008992859.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Gossypium stocksii] gi|326457438|gb|ADZ74698.1|
NADH-plastoquinone oxidoreductase subunit 4 [Gossypium
stocksii]
Length = 500
Score = 52.0 bits (123), Expect(2) = 6e-08
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 28 TILVF-PISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
TI+VF PIS GSL+FFL H N L+ W+ IC CI E LL CYH
Sbjct: 8 TIIVFLPISAGSLLFFLPHKGNKLIKWYTICICIFELLLTTYAFCYH 54
Score = 30.4 bits (67), Expect(2) = 6e-08
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL EDYKWI F+ F + + I+
Sbjct: 52 CYHFRL-----DDPLIQLAEDYKWINFFDFYWRLGID 83
>ref|YP_008992773.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Gossypium longicalyx] gi|326457350|gb|ADZ74611.1|
NADH-plastoquinone oxidoreductase subunit 4 [Gossypium
longicalyx]
Length = 500
Score = 52.0 bits (123), Expect(2) = 6e-08
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 28 TILVF-PISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
TI+VF PIS GSL+FFL H N L+ W+ IC CI E LL CYH
Sbjct: 8 TIIVFLPISAGSLLFFLPHKGNKLIKWYTICICIFELLLTTYAFCYH 54
Score = 30.4 bits (67), Expect(2) = 6e-08
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL EDYKWI F+ F + + I+
Sbjct: 52 CYHFRL-----DDPLIQLAEDYKWINFFDFYWRLGID 83
>ref|YP_008992687.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Gossypium herbaceum] gi|326457266|gb|ADZ74528.1|
NADH-plastoquinone oxidoreductase subunit 4 [Gossypium
herbaceum]
Length = 500
Score = 52.0 bits (123), Expect(2) = 6e-08
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 28 TILVF-PISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
TI+VF PIS GSL+FFL H N L+ W+ IC CI E LL CYH
Sbjct: 8 TIIVFLPISAGSLLFFLPHKGNKLIKWYTICICIFELLLTTYAFCYH 54
Score = 30.4 bits (67), Expect(2) = 6e-08
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL EDYKWI F+ F + + I+
Sbjct: 52 CYHFRL-----DDPLIQLAEDYKWINFFDFYWRLGID 83
>ref|YP_008992601.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Gossypium bickii] gi|326457178|gb|ADZ74441.1|
NADH-plastoquinone oxidoreductase subunit 4 [Gossypium
bickii]
Length = 500
Score = 52.0 bits (123), Expect(2) = 6e-08
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 28 TILVF-PISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
TI+VF PIS GSL+FFL H N L+ W+ IC CI E LL CYH
Sbjct: 8 TIIVFLPISAGSLLFFLPHKGNKLIKWYTICICIFELLLTTYAFCYH 54
Score = 30.4 bits (67), Expect(2) = 6e-08
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL EDYKWI F+ F + + I+
Sbjct: 52 CYHFRL-----DDPLIQLAEDYKWINFFDFYWRLGID 83
>ref|YP_008992514.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Gossypium anomalum] gi|326457088|gb|ADZ74352.1|
NADH-plastoquinone oxidoreductase subunit 4 [Gossypium
anomalum]
Length = 500
Score = 52.0 bits (123), Expect(2) = 6e-08
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 28 TILVF-PISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
TI+VF PIS GSL+FFL H N L+ W+ IC CI E LL CYH
Sbjct: 8 TIIVFLPISAGSLLFFLPHKGNKLIKWYTICICIFELLLTTYAFCYH 54
Score = 30.4 bits (67), Expect(2) = 6e-08
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL EDYKWI F+ F + + I+
Sbjct: 52 CYHFRL-----DDPLIQLAEDYKWINFFDFYWRLGID 83
>gb|ACB29146.1| NADH dehydrogenase subunit D [Dasyphyllum reticulatum]
Length = 500
Score = 51.2 bits (121), Expect(2) = 6e-08
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +1
Query: 16 SFP--TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
+FP T I+V PI GSLIFFL H N ++ W+ IC CI E LL CYH
Sbjct: 3 NFPWLTIIVVLPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYH 54
Score = 31.2 bits (69), Expect(2) = 6e-08
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL+EDYKWI F+ F + + I+
Sbjct: 52 CYHFQL-----DDPLIQLVEDYKWINFFDFRWKLGID 83
>ref|YP_008082782.1| NADH-plastoquinone oxidoreductase subunit 4 [Prinsepia utilis]
gi|501418871|gb|AGL94748.1| NADH-plastoquinone
oxidoreductase subunit 4 [Prinsepia utilis]
Length = 502
Score = 52.0 bits (123), Expect(2) = 7e-08
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 25 TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
T ++VFPI GSLIFFL H N ++ W+ +C CI E LL CYH
Sbjct: 8 TLVVVFPIFAGSLIFFLPHRGNKVIRWYTLCICIVELLLTTYAFCYH 54
Score = 30.0 bits (66), Expect(2) = 7e-08
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL EDYKWI F+ F + + I+
Sbjct: 52 CYHFQL-----DDPLMQLTEDYKWIDFFDFYWRLGID 83
>gb|ACB29187.1| NADH dehydrogenase subunit D [Osteospermum asperulum]
Length = 500
Score = 50.8 bits (120), Expect(2) = 7e-08
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 25 TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
T I+V PI GSLIFFL H N ++ W+ IC CI E LL CYH
Sbjct: 8 TIIVVLPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYH 54
Score = 31.2 bits (69), Expect(2) = 7e-08
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL+EDYKWI F+ F + + I+
Sbjct: 52 CYHFEL-----DDPLIQLVEDYKWINFFDFRWKLGID 83
>gb|ACB29141.1| NADH dehydrogenase subunit D [Chrysanthemoides monilifera]
Length = 500
Score = 50.8 bits (120), Expect(2) = 7e-08
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 25 TTILVFPISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
T I+V PI GSLIFFL H N ++ W+ IC CI E LL CYH
Sbjct: 8 TIIVVLPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYH 54
Score = 31.2 bits (69), Expect(2) = 7e-08
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL+EDYKWI F+ F + + I+
Sbjct: 52 CYHFEL-----DDPLIQLVEDYKWINFFDFRWKLGID 83
>ref|YP_005087746.1| NADH dehydrogenase subunit 4 (chloroplast) [Gossypium raimondii]
gi|318084697|gb|ADV39169.1| NADH dehydrogenase subunit 4
(chloroplast) [Gossypium raimondii]
Length = 500
Score = 51.2 bits (121), Expect(2) = 9e-08
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 28 TILVF-PISVGSLIFFLSHWENGLVWWHAICKCISE-LLNVCTLCYH 162
TI+VF PIS GSL+FFL H N L+ W+ IC CI E LL CYH
Sbjct: 8 TIIVFLPISAGSLLFFLPHKGNKLMKWYTICICIFELLLTTYAFCYH 54
Score = 30.4 bits (67), Expect(2) = 9e-08
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CVHYVIMSIHPEDTLVQLLEDYKWI-FYSFLFLILIE 250
C H+ + +D L+QL EDYKWI F+ F + + I+
Sbjct: 52 CYHFRL-----DDPLIQLAEDYKWINFFDFYWRLGID 83