BLASTX nr result
ID: Rauwolfia21_contig00053426
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00053426
(257 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX93637.1| Chlorophyll a-b binding protein 3, chloroplastic ... 74 3e-11
gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris... 74 3e-11
gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris... 72 8e-11
ref|XP_006471243.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll ... 70 2e-10
ref|XP_006431742.1| hypothetical protein CICLE_v10002129mg [Citr... 70 2e-10
gb|EMJ16936.1| hypothetical protein PRUPE_ppa009110mg [Prunus pe... 69 8e-10
ref|XP_006857558.1| hypothetical protein AMTR_s00061p00059490 [A... 67 3e-09
ref|XP_004251826.1| PREDICTED: chlorophyll a-b binding protein 8... 67 3e-09
gb|AFK45661.1| unknown [Medicago truncatula] 67 3e-09
ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago tr... 67 3e-09
ref|XP_003618082.1| Chlorophyll a-b binding protein [Medicago tr... 67 3e-09
gb|EPS72213.1| hypothetical protein M569_02545 [Genlisea aurea] 66 5e-09
gb|EXC35022.1| Chlorophyll a-b binding protein 8 [Morus notabilis] 65 7e-09
prf||1609235A chlorophyll a/b binding protein 65 7e-09
sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b binding pro... 65 7e-09
ref|XP_006360010.1| PREDICTED: chlorophyll a-b binding protein 8... 65 7e-09
ref|XP_004248217.1| PREDICTED: chlorophyll a-b binding protein 8... 65 7e-09
gb|ADE42967.1| type III chlorophyll a/b binding protein [Gardeni... 65 1e-08
ref|XP_006350000.1| PREDICTED: chlorophyll a-b binding protein 8... 64 2e-08
ref|XP_006647025.1| PREDICTED: chlorophyll a-b binding protein 8... 64 3e-08
>gb|EOX93637.1| Chlorophyll a-b binding protein 3, chloroplastic [Theobroma cacao]
Length = 275
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/70 (60%), Positives = 48/70 (68%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGA 33
MATQ L+ +E ARQ+ RPLQ +GSSRKGSFVVRAA+TPPVKQGA
Sbjct: 1 MATQALLSSSLTPS----VETARQILGARPLQSP---IGSSRKGSFVVRAASTPPVKQGA 53
Query: 32 NRQLWFASKQ 3
+R LWFASKQ
Sbjct: 54 DRPLWFASKQ 63
>gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
Length = 275
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 MEAARQVFRGRPLQYA-TVNVGSSRKGSFVVRAAATPPVKQGANRQLWFASKQ 3
MEA RQ+ GRP+Q+ T + SSRK SFVV+AA+TPPVKQGA+RQLWFASKQ
Sbjct: 11 MEAGRQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQ 63
>gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
Length = 275
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/53 (67%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 MEAARQVFRGRPLQYA-TVNVGSSRKGSFVVRAAATPPVKQGANRQLWFASKQ 3
MEA RQ+ GRP+Q+ + + SSRK SFVV+AA+TPPVKQGA+RQLWFASKQ
Sbjct: 11 MEAGRQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQ 63
>ref|XP_006471243.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll a-b binding protein 8,
chloroplastic-like [Citrus sinensis]
Length = 309
Score = 70.5 bits (171), Expect = 2e-10
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGA 33
MATQ LV +E ARQ+ R Q T GSSRKGSFVVRAA+TPPVKQGA
Sbjct: 1 MATQALVSSSLTSS----VETARQILGARSAQSPT---GSSRKGSFVVRAASTPPVKQGA 53
Query: 32 NRQLWFASKQ 3
+R LWFASKQ
Sbjct: 54 DRPLWFASKQ 63
>ref|XP_006431742.1| hypothetical protein CICLE_v10002129mg [Citrus clementina]
gi|557533864|gb|ESR44982.1| hypothetical protein
CICLE_v10002129mg [Citrus clementina]
Length = 275
Score = 70.5 bits (171), Expect = 2e-10
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGA 33
MATQ LV +E ARQ+ R Q T GSSRKGSFVVRAA+TPPVKQGA
Sbjct: 1 MATQALVSSSLTSS----VETARQILGARSAQSPT---GSSRKGSFVVRAASTPPVKQGA 53
Query: 32 NRQLWFASKQ 3
+R LWFASKQ
Sbjct: 54 DRPLWFASKQ 63
>gb|EMJ16936.1| hypothetical protein PRUPE_ppa009110mg [Prunus persica]
Length = 306
Score = 68.6 bits (166), Expect = 8e-10
Identities = 44/85 (51%), Positives = 52/85 (61%)
Frame = -1
Query: 257 EKENLKKNGET*RKTMATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGS 78
E+E K G+ RK MATQ LV EAAR + G+ +Q GS + S
Sbjct: 17 ERERESKGGKEKRK-MATQALVSSSSLTASK---EAARHLLGGKAVQSP---FGSRKSAS 69
Query: 77 FVVRAAATPPVKQGANRQLWFASKQ 3
FVVRAA+TPPVKQGA+RQLWFASKQ
Sbjct: 70 FVVRAASTPPVKQGADRQLWFASKQ 94
>ref|XP_006857558.1| hypothetical protein AMTR_s00061p00059490 [Amborella trichopoda]
gi|548861654|gb|ERN19025.1| hypothetical protein
AMTR_s00061p00059490 [Amborella trichopoda]
Length = 293
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
Frame = -1
Query: 158 MEAARQVF--RGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGANRQLWFASKQ 3
++A RQ F GRP Q + + GS RK FVVRAA+TPPVKQGA+RQLWFASKQ
Sbjct: 28 VDAGRQQFVMGGRPTQSSRSSSGSLRKSPFVVRAASTPPVKQGADRQLWFASKQ 81
>ref|XP_004251826.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Solanum lycopersicum]
Length = 273
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/70 (55%), Positives = 42/70 (60%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGA 33
MATQ L+ EAARQ+ GRP Q +K SFVVRA ATPPVKQGA
Sbjct: 1 MATQALISSSSIASST---EAARQILGGRPFQ------SQIKKASFVVRATATPPVKQGA 51
Query: 32 NRQLWFASKQ 3
NR LWFASKQ
Sbjct: 52 NRPLWFASKQ 61
>gb|AFK45661.1| unknown [Medicago truncatula]
Length = 277
Score = 66.6 bits (161), Expect = 3e-09
Identities = 42/71 (59%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQ-G 36
MATQ LV EA RQ F R L + +GSSRKGSFVV+AA++PPVKQ G
Sbjct: 1 MATQALVSSSSLTFAA---EAVRQSFGARSLPSS---IGSSRKGSFVVKAASSPPVKQNG 54
Query: 35 ANRQLWFASKQ 3
ANRQLWFASKQ
Sbjct: 55 ANRQLWFASKQ 65
>ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519418|gb|AET01042.1| Chlorophyll a-b binding
protein [Medicago truncatula]
Length = 573
Score = 66.6 bits (161), Expect = 3e-09
Identities = 42/71 (59%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQ-G 36
MATQ LV EA RQ F R L + +GSSRKGSFVV+AA++PPVKQ G
Sbjct: 1 MATQALVSSSSLTFAA---EAVRQSFGARSLPSS---IGSSRKGSFVVKAASSPPVKQNG 54
Query: 35 ANRQLWFASKQ 3
ANRQLWFASKQ
Sbjct: 55 ANRQLWFASKQ 65
Score = 60.1 bits (144), Expect = 3e-07
Identities = 42/83 (50%), Positives = 47/83 (56%)
Frame = -1
Query: 251 ENLKKNGET*RKTMATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFV 72
+ L G K MATQ L+ EA RQ F R L + +GSSRKGSFV
Sbjct: 286 KKLVPRGNKEGKNMATQVLLSSSSLTFAA---EAVRQSFGARSLPSS---IGSSRKGSFV 339
Query: 71 VRAAATPPVKQGANRQLWFASKQ 3
V+AAA P K GANRQLWFASKQ
Sbjct: 340 VKAAA-PVKKGGANRQLWFASKQ 361
>ref|XP_003618082.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519417|gb|AET01041.1| Chlorophyll a-b binding
protein [Medicago truncatula]
Length = 557
Score = 66.6 bits (161), Expect = 3e-09
Identities = 42/71 (59%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQ-G 36
MATQ LV EA RQ F R L + +GSSRKGSFVV+AA++PPVKQ G
Sbjct: 1 MATQALVSSSSLTFAA---EAVRQSFGARSLPSS---IGSSRKGSFVVKAASSPPVKQNG 54
Query: 35 ANRQLWFASKQ 3
ANRQLWFASKQ
Sbjct: 55 ANRQLWFASKQ 65
Score = 60.5 bits (145), Expect = 2e-07
Identities = 44/82 (53%), Positives = 49/82 (59%)
Frame = -1
Query: 248 NLKKNGET*RKTMATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVV 69
+LK N E K MATQ L+ EA RQ F R L + +GSSRKGSFVV
Sbjct: 273 SLKGNKEG--KNMATQVLLSSSSLTFAA---EAVRQSFGARSLPSS---IGSSRKGSFVV 324
Query: 68 RAAATPPVKQGANRQLWFASKQ 3
+AAA P K GANRQLWFASKQ
Sbjct: 325 KAAA-PVKKGGANRQLWFASKQ 345
>gb|EPS72213.1| hypothetical protein M569_02545 [Genlisea aurea]
Length = 526
Score = 65.9 bits (159), Expect = 5e-09
Identities = 34/51 (66%), Positives = 39/51 (76%)
Frame = -1
Query: 155 EAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGANRQLWFASKQ 3
E +RQ+ GRP+Q SSRK SFVVRAA +PPVKQGA+RQLWFASKQ
Sbjct: 271 EVSRQILAGRPIQ-------SSRKISFVVRAATSPPVKQGADRQLWFASKQ 314
>gb|EXC35022.1| Chlorophyll a-b binding protein 8 [Morus notabilis]
Length = 273
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/70 (54%), Positives = 44/70 (62%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGA 33
MATQ LV +EAARQ+F RP Q + R SFVVRAA+TPP+KQGA
Sbjct: 1 MATQALVSSSSLTSS---VEAARQIFGSRPTQ------STRRSASFVVRAASTPPIKQGA 51
Query: 32 NRQLWFASKQ 3
+R LWFASKQ
Sbjct: 52 DRPLWFASKQ 61
>prf||1609235A chlorophyll a/b binding protein
Length = 273
Score = 65.5 bits (158), Expect = 7e-09
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGA 33
MATQ L+ EAARQ+ R Q T RK SFVVRAA+TPPVKQGA
Sbjct: 1 MATQALISSSSISTSA---EAARQIIGSRISQSVT------RKASFVVRAASTPPVKQGA 51
Query: 32 NRQLWFASKQ 3
NRQLWFASKQ
Sbjct: 52 NRQLWFASKQ 61
>sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
AltName: Full=LHCI type III CAB-8; Flags: Precursor
gi|19182|emb|CAA33330.1| Type III chlorophyll
a/b-binding protein [Solanum lycopersicum]
Length = 273
Score = 65.5 bits (158), Expect = 7e-09
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGA 33
MATQ L+ EAARQ+ R Q T RK SFVVRAA+TPPVKQGA
Sbjct: 1 MATQALISSSSISTSA---EAARQIIGSRISQSVT------RKASFVVRAASTPPVKQGA 51
Query: 32 NRQLWFASKQ 3
NRQLWFASKQ
Sbjct: 52 NRQLWFASKQ 61
>ref|XP_006360010.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Solanum tuberosum]
Length = 273
Score = 65.5 bits (158), Expect = 7e-09
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGA 33
MATQ L+ EAARQ+ R Q T RK SFVVRAA+TPPVKQGA
Sbjct: 1 MATQALISSSSISTSA---EAARQILGSRISQSVT------RKASFVVRAASTPPVKQGA 51
Query: 32 NRQLWFASKQ 3
NRQLWFASKQ
Sbjct: 52 NRQLWFASKQ 61
>ref|XP_004248217.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Solanum lycopersicum]
Length = 273
Score = 65.5 bits (158), Expect = 7e-09
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGA 33
MATQ L+ EAARQ+ R Q T RK SFVVRAA+TPPVKQGA
Sbjct: 1 MATQALISSSSISTSA---EAARQIIGSRISQSVT------RKASFVVRAASTPPVKQGA 51
Query: 32 NRQLWFASKQ 3
NRQLWFASKQ
Sbjct: 52 NRQLWFASKQ 61
>gb|ADE42967.1| type III chlorophyll a/b binding protein [Gardenia jasminoides]
Length = 274
Score = 64.7 bits (156), Expect = 1e-08
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGA 33
MATQ LV EAARQ+ GR Q + SSRK SF VRA ATPP KQGA
Sbjct: 1 MATQALVSSSSITASA---EAARQILGGRSFQSS-----SSRKVSFAVRAEATPPAKQGA 52
Query: 32 NRQLWFASKQ 3
+RQLWFASKQ
Sbjct: 53 DRQLWFASKQ 62
>ref|XP_006350000.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Solanum tuberosum]
Length = 273
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/70 (54%), Positives = 41/70 (58%)
Frame = -1
Query: 212 MATQTLVXXXXXXXXXXSMEAARQVFRGRPLQYATVNVGSSRKGSFVVRAAATPPVKQGA 33
MATQ L+ EAARQ+ GRP Q +K S VVRA ATPPVKQGA
Sbjct: 1 MATQALISSSSIASST---EAARQILGGRPFQ------SPIKKASLVVRATATPPVKQGA 51
Query: 32 NRQLWFASKQ 3
NR LWFASKQ
Sbjct: 52 NRPLWFASKQ 61
>ref|XP_006647025.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Oryza brachyantha]
Length = 269
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -1
Query: 131 GRPLQYATVNVGSSRKGSFVVRAAATPPVKQGANRQLWFASKQ 3
GRPLQ + SSRK F+VRA ATPP KQGA+RQLWFASKQ
Sbjct: 14 GRPLQSSASRSSSSRKSPFIVRAEATPPAKQGADRQLWFASKQ 56