BLASTX nr result

ID: Rauwolfia21_contig00053132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00053132
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348793.1| PREDICTED: uncharacterized protein LOC102601...    50   3e-08
ref|XP_002445319.1| hypothetical protein SORBIDRAFT_07g009320 [S...    40   4e-06
ref|XP_002460012.1| hypothetical protein SORBIDRAFT_02g020820 [S...    40   4e-06
ref|XP_002453068.1| hypothetical protein SORBIDRAFT_04g037770 [S...    39   8e-06
ref|XP_002440314.1| hypothetical protein SORBIDRAFT_09g029620 [S...    38   1e-05

>ref|XP_006348793.1| PREDICTED: uncharacterized protein LOC102601726 [Solanum tuberosum]
          Length = 1028

 Score = 49.7 bits (117), Expect(2) = 3e-08
 Identities = 29/91 (31%), Positives = 44/91 (48%)
 Frame = +1

Query: 13  LNYILRKLRSFQMPSNPKKLWEKFQFSLSEDYIQHKDMTGFSMERITEKVIADIDSFLQS 192
           L  +   L  +  P NP+KLWE+F+ S+ EDY   K +     + I  + +  I+  L S
Sbjct: 637 LRRLFATLLVYCAPVNPRKLWEQFEDSMVEDY---KMLQTIERKNIRYQALNHINDILHS 693

Query: 193 MGKSITEFNFASCKINSSFQQKMTREVQCEK 285
           MG  I E+      INSS   +   +V  E+
Sbjct: 694 MGHDINEYELIPQSINSSAAAREANDVHFER 724



 Score = 33.9 bits (76), Expect(2) = 3e-08
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = +2

Query: 281 KNIHISEEDLLNKNRLNEQQKIAFEEIFEAAIQDTGKSFFID 406
           ++I +SE+D+L   +LN++Q IA+  I E    +   +FFID
Sbjct: 724 RSITVSEDDVLLHKKLNKKQMIAYNVITERIFSNKVGAFFID 765


>ref|XP_002445319.1| hypothetical protein SORBIDRAFT_07g009320 [Sorghum bicolor]
            gi|241941669|gb|EES14814.1| hypothetical protein
            SORBIDRAFT_07g009320 [Sorghum bicolor]
          Length = 1342

 Score = 40.4 bits (93), Expect(2) = 4e-06
 Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
 Frame = +1

Query: 10   ILNYILRKLRS----FQMPSNPKKLWEKFQFSLSEDYIQHKDMTGFSMERITEKVIADID 177
            ++ Y LR+L +    F  PS+  KLWEK + ++SEDY ++   T F++E++   V+ DI 
Sbjct: 924  MMPYALRRLFATILVFCEPSDVLKLWEKHKEAMSEDYRRNNQST-FAVEQM---VLIDIR 979

Query: 178  SFLQSMGKSI 207
              L+SM K I
Sbjct: 980  KLLESMQKDI 989



 Score = 35.4 bits (80), Expect(2) = 4e-06
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +2

Query: 263  QEKFNVKNIHISEEDLLNKNRLNEQQKIAFEEIFEAAIQDTGKSFFID 406
            +E F   ++  S +D+     LNE+Q+ A+ EI  A   D G  FF+D
Sbjct: 1009 REIFEEASVEASIDDMALSKTLNEEQRAAYNEIMSAIDTDHGGLFFVD 1056


>ref|XP_002460012.1| hypothetical protein SORBIDRAFT_02g020820 [Sorghum bicolor]
           gi|241923389|gb|EER96533.1| hypothetical protein
           SORBIDRAFT_02g020820 [Sorghum bicolor]
          Length = 1234

 Score = 40.4 bits (93), Expect(2) = 4e-06
 Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
 Frame = +1

Query: 10  ILNYILRKLRS----FQMPSNPKKLWEKFQFSLSEDYIQHKDMTGFSMERITEKVIADID 177
           ++ Y LR+L +    F  PS+  KLWEK + ++SEDY ++   T F++E++   V+ DI 
Sbjct: 658 MMPYALRRLFATILVFCEPSDVLKLWEKHKEAMSEDYRRNNQST-FAVEQM---VLIDIR 713

Query: 178 SFLQSMGKSI 207
             L+SM K I
Sbjct: 714 KLLESMQKDI 723



 Score = 35.4 bits (80), Expect(2) = 4e-06
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +2

Query: 263 QEKFNVKNIHISEEDLLNKNRLNEQQKIAFEEIFEAAIQDTGKSFFID 406
           +E F   ++  S +D+     LNE+Q+ A+ EI  A   D G  FF+D
Sbjct: 743 REIFEEASVEASIDDMALSKTLNEEQRAAYNEIMSAIDTDHGGLFFVD 790


>ref|XP_002453068.1| hypothetical protein SORBIDRAFT_04g037770 [Sorghum bicolor]
            gi|241932899|gb|EES06044.1| hypothetical protein
            SORBIDRAFT_04g037770 [Sorghum bicolor]
          Length = 1275

 Score = 38.9 bits (89), Expect(2) = 8e-06
 Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
 Frame = +1

Query: 10   ILNYILRKLRS----FQMPSNPKKLWEKFQFSLSEDYIQHKDMTGFSMERITEKVIADID 177
            ++ Y LR+L +    F  PS+  +LWEK + ++SEDY +  + + F++E++   V+ DI 
Sbjct: 913  MMPYALRRLFATILVFCEPSDVLELWEKHKEAMSEDY-RRNNQSSFAVEQM---VLIDIR 968

Query: 178  SFLQSMGKSI 207
              L+SM K I
Sbjct: 969  KLLESMQKDI 978



 Score = 36.2 bits (82), Expect(2) = 8e-06
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = +2

Query: 263  QEKFNVKNIHISEEDLLNKNRLNEQQKIAFEEIFEAAIQDTGKSFFID 406
            +E F   N+  S +D+     LNE+Q+ A+ EI  A   D G  FF+D
Sbjct: 998  REIFEEANVEASIDDMALSVTLNEEQRAAYNEIMSAINTDHGGLFFVD 1045


>ref|XP_002440314.1| hypothetical protein SORBIDRAFT_09g029620 [Sorghum bicolor]
           gi|241945599|gb|EES18744.1| hypothetical protein
           SORBIDRAFT_09g029620 [Sorghum bicolor]
          Length = 1108

 Score = 37.7 bits (86), Expect(2) = 1e-05
 Identities = 22/77 (28%), Positives = 34/77 (44%)
 Frame = +1

Query: 43  FQMPSNPKKLWEKFQFSLSEDYIQHKDMTGFSMERITEKVIADIDSFLQSMGKSITEFNF 222
           F  P++ + LW     ++SEDY +H          + + V+ +I   LQSMGK I  F  
Sbjct: 538 FCEPNDIRSLWNNHLEAMSEDYSRHCKCK----HTVQQMVLKNIRDMLQSMGKDIESFPL 593

Query: 223 ASCKINSSFQQKMTREV 273
               I       + RE+
Sbjct: 594 PKIDIQHDTSDSVPREI 610



 Score = 37.0 bits (84), Expect(2) = 1e-05
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +2

Query: 263 QEKFNVKNIHISEEDLLNKNRLNEQQKIAFEEIFEAAIQDTGKSFFID 406
           +E     ++ +  ED      LN +QKIA+E+I   AI + G  FF+D
Sbjct: 608 REIIEESSVQVDPEDTTLHEYLNNEQKIAYEKILSTAISNKGGIFFVD 655


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