BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00052816
         (480 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS73753.1| hypothetical protein M569_01004 [Genlisea aurea]       178   6e-43
ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi...   165   5e-39
ref|XP_006349790.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38
gb|EXC33915.1| hypothetical protein L484_012805 [Morus notabilis]     161   1e-37
ref|XP_004253145.1| PREDICTED: pentatricopeptide repeat-containi...   160   2e-37
gb|EOY08105.1| Pentatricopeptide (PPR) repeat-containing protein...   149   3e-34
ref|XP_006465146.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_006436362.1| hypothetical protein CICLE_v10033972mg [Citr...   137   1e-30
ref|XP_004305365.1| PREDICTED: pentatricopeptide repeat-containi...   137   2e-30
ref|XP_006604616.1| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,...   130   2e-28
gb|ESW34841.1| hypothetical protein PHAVU_001G185900g [Phaseolus...   128   7e-28
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi...   128   7e-28
ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arab...   124   2e-26
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar...   122   5e-26
ref|XP_006287082.1| hypothetical protein CARUB_v10000242mg [Caps...   119   4e-25
gb|EOY08106.1| Pentatricopeptide (PPR) repeat-containing protein...   110   1e-22
ref|XP_002316451.2| pentatricopeptide repeat-containing family p...   109   3e-22
ref|XP_006399727.1| hypothetical protein EUTSA_v10015810mg, part...   102   4e-20
ref|XP_004494138.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19

>gb|EPS73753.1| hypothetical protein M569_01004 [Genlisea aurea]
          Length = 679

 Score =  178 bits (452), Expect = 6e-43
 Identities = 95/161 (59%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
 Frame = -2

Query: 479 NRTEAAKRFLKTLIASNSVSQLYTVFC--ISSPPPTKPLFFNMLLLLYAESKLPNEATEL 306
           NR E  KR L +LI+ +S   LY  F   +S+ P TKP+F + LL +YA+SKLP+EA  L
Sbjct: 45  NRIETTKRHLGSLISLHSPPDLYAAFSDSVSASPSTKPVFRDALLTVYADSKLPDEAACL 104

Query: 305 YNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAVK 126
           Y LIR D NFPS  A NLFLE LV SN+Y K LEVF  A+  GF +D+FSYGKAIQ+++K
Sbjct: 105 YALIRADGNFPSRTALNLFLECLVRSNRYEKALEVFHGALAGGFPMDKFSYGKAIQASIK 164

Query: 125 LGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           LGDL  GLE M  MK+SG  P+ F YNVLIGGLCKERR+ D
Sbjct: 165 LGDLPKGLELMKLMKRSGEKPNCFVYNVLIGGLCKERRVGD 205


>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  165 bits (418), Expect = 5e-39
 Identities = 86/162 (53%), Positives = 119/162 (73%), Gaps = 4/162 (2%)
 Frame = -2

Query: 476 RTEAAKRFLKTLIAS----NSVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEATE 309
           RTE A+R +++++      +S S LYT+F +SS P  KPLF +MLL + +ESK+ +E+ E
Sbjct: 75  RTETARRLIRSMLLPKSPFSSPSHLYTLFSLSSTP-MKPLFSDMLLSICSESKMVSESAE 133

Query: 308 LYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAV 129
           LY L++KD   PS+A+ NLFLE+LV++ +Y  TL++F + V  G R DQF YGKAIQ+AV
Sbjct: 134 LYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAV 193

Query: 128 KLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           KLGDLK  +E M  MK+ GVSP  F YNV+IGGLCKE+R++D
Sbjct: 194 KLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKD 235


>ref|XP_006349790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Solanum tuberosum]
          Length = 808

 Score =  162 bits (411), Expect = 3e-38
 Identities = 87/156 (55%), Positives = 112/156 (71%)
 Frame = -2

Query: 476 RTEAAKRFLKTLIASNSVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEATELYNL 297
           R E AK  L TLI ++SVSQLY++F   SP P KPLF ++L  LY ESKL N+A ELY+L
Sbjct: 65  RMENAKGILGTLIHTSSVSQLYSLF---SPSPAKPLFSDLLFSLYLESKLINQAEELYSL 121

Query: 296 IRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAVKLGD 117
           IR+D  FPSL+ FN+FLE+L +  +Y KTLEVF D +  G R+D+ SYGKAI SAVKLGD
Sbjct: 122 IREDKKFPSLSVFNVFLESLNSLRRYKKTLEVFSDVMKWGIRVDKTSYGKAILSAVKLGD 181

Query: 116 LKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRI 9
           +   LE ++ M+   V    F YNV++GGLCKE+R+
Sbjct: 182 MGKALELLDCMRNGRVGMDKFVYNVVMGGLCKEKRV 217



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/121 (25%), Positives = 55/121 (45%)
 Frame = -2

Query: 365 FNMLLLLYAESKLPNEATELYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAV 186
           FN L+  + E  +  EA E    + + +  P++  +N+ ++      ++ +  E+  +  
Sbjct: 414 FNTLITKFCELGMMEEANEWLRKMLEKSVSPNVQTYNILIDGYGRKREFVRCFEILEEME 473

Query: 185 NRGFRLDQFSYGKAIQSAVKLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIE 6
           N G   +  +YG  I S  K G L      ++ M   GV P+   YN+LI G C   R+ 
Sbjct: 474 NNGLNPNVITYGSLINSLCKDGRLLEADVVLSDMISRGVKPNAQVYNMLIDGHCMRGRMT 533

Query: 5   D 3
           D
Sbjct: 534 D 534


>gb|EXC33915.1| hypothetical protein L484_012805 [Morus notabilis]
          Length = 821

 Score =  161 bits (407), Expect = 1e-37
 Identities = 86/162 (53%), Positives = 115/162 (70%), Gaps = 4/162 (2%)
 Frame = -2

Query: 476 RTEAAKRFLKTLIAS----NSVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEATE 309
           RT+ A+R +K+L+AS    +S S L+ +  +SSPP  KP F +ML+    ES++  EA E
Sbjct: 74  RTDTARRLIKSLVASKSPFSSPSDLFYLLSLSSPP-MKPAFSSMLMSACLESRMIAEAME 132

Query: 308 LYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAV 129
           LY L RK+  FPSLA+FNL LE L++S QY K LE+F + V   FR D+F+Y KAIQ++V
Sbjct: 133 LYALTRKEGTFPSLASFNLLLETLISSKQYGKALELFYEIVESRFRPDRFTYAKAIQASV 192

Query: 128 KLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           KLGDLK   E +N MK+ G+SP+ F YNV++GGLCKERRI D
Sbjct: 193 KLGDLKKAGELLNGMKRIGMSPNVFIYNVMLGGLCKERRIRD 234



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/121 (28%), Positives = 55/121 (45%)
 Frame = -2

Query: 365 FNMLLLLYAESKLPNEATELYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAV 186
           FN L+  + E K  ++A EL   + K   FP +A +N  +        + K   +     
Sbjct: 429 FNTLIDKFCEMKEMDKAEELVKKMVKKEVFPDVATYNTLINGYGQMRDFDKCFLILEQME 488

Query: 185 NRGFRLDQFSYGKAIQSAVKLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIE 6
           N G + +  SYG  I+S    G L      +  M   GV+P+   YN++I G C  R+++
Sbjct: 489 NEGVKPNVVSYGSLIKSLCGDGRLLEAEIILRDMVSGGVTPNAQIYNIIIDGNCTARKLK 548

Query: 5   D 3
           D
Sbjct: 549 D 549


>ref|XP_004253145.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Solanum lycopersicum]
          Length = 790

 Score =  160 bits (405), Expect = 2e-37
 Identities = 86/156 (55%), Positives = 112/156 (71%)
 Frame = -2

Query: 476 RTEAAKRFLKTLIASNSVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEATELYNL 297
           R E AK  L TLI ++SVSQLY++F   SP P KPL  ++L  LY ESKL N+A ELY+L
Sbjct: 66  RMENAKGILGTLIHTSSVSQLYSLF---SPSPAKPLLSDLLFSLYLESKLINQAEELYSL 122

Query: 296 IRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAVKLGD 117
           IR++  FPSL+A N+FLE+L +  +Y KTLEVF D +N G R+D+ SYGKAI SAVK+GD
Sbjct: 123 IREEKKFPSLSAINVFLESLNSLRKYKKTLEVFSDVMNWGIRVDKASYGKAILSAVKIGD 182

Query: 116 LKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRI 9
           L   LE ++ M+   V    F YNV++GGLCKE+R+
Sbjct: 183 LGKALELLDCMRSGKVGMDKFVYNVVMGGLCKEKRV 218


>gb|EOY08105.1| Pentatricopeptide (PPR) repeat-containing protein, putative isoform
           1 [Theobroma cacao] gi|508716210|gb|EOY08107.1|
           Pentatricopeptide (PPR) repeat-containing protein,
           putative isoform 1 [Theobroma cacao]
          Length = 819

 Score =  149 bits (377), Expect = 3e-34
 Identities = 80/162 (49%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
 Frame = -2

Query: 476 RTEAAKRFLKTLIASNSV----SQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEATE 309
           +T+AA+   K+L+ S S     S L+T+F ++SP   K +F N+L  L AESK+ +EA E
Sbjct: 73  QTQAAQNLTKSLLFSKSPFASPSDLFTLFSLTSPS-LKLIFSNILFSLLAESKMHSEALE 131

Query: 308 LYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAV 129
           LY  +RK+   PS+ + NL LE+LV+ N++ KT+ +F + +  GFR ++F YGKA+Q+AV
Sbjct: 132 LYKAMRKEGMQPSITSLNLLLESLVSLNKFDKTINLFEEIIESGFRPNKFMYGKAVQAAV 191

Query: 128 KLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           KLGDLK   E ++ MKK GVSPS F YN LIGG+CKE+RI D
Sbjct: 192 KLGDLKRANEYVHSMKKKGVSPSLFIYNALIGGVCKEKRIRD 233


>ref|XP_006465146.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568821359|ref|XP_006465147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X2 [Citrus sinensis]
           gi|568821361|ref|XP_006465148.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X3 [Citrus sinensis]
           gi|568821363|ref|XP_006465149.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X4 [Citrus sinensis]
          Length = 808

 Score =  140 bits (354), Expect = 1e-31
 Identities = 76/164 (46%), Positives = 109/164 (66%), Gaps = 5/164 (3%)
 Frame = -2

Query: 479 NRTEAAKRFLKTLIASN-----SVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEA 315
           NRTEAA+  +K+++ SN     S  +L+++F +SSP   KP F N+LL + + +KLP+EA
Sbjct: 60  NRTEAAQSLIKSIVLSNASPFTSPHELFSLFSVSSPY-YKPTFTNILLSILSSAKLPSEA 118

Query: 314 TELYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQS 135
            +LY   + D    SL + N+ LE LV  NQY + L++F + V  GFR D+F+YGKA+Q+
Sbjct: 119 LQLYASTKADGTRLSLDSINVLLECLVRCNQYDRALDLFDEIVCMGFRPDKFTYGKAVQA 178

Query: 134 AVKLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           AVK+GDLK   E  + M+KS   P+ F YNVLI G CKE++I D
Sbjct: 179 AVKIGDLKRACEIFDGMEKSRTRPNVFVYNVLISGFCKEKKIRD 222


>ref|XP_006436362.1| hypothetical protein CICLE_v10033972mg [Citrus clementina]
           gi|557538558|gb|ESR49602.1| hypothetical protein
           CICLE_v10033972mg [Citrus clementina]
          Length = 804

 Score =  137 bits (346), Expect = 1e-30
 Identities = 74/164 (45%), Positives = 109/164 (66%), Gaps = 5/164 (3%)
 Frame = -2

Query: 479 NRTEAAKRFLKTLIASN-----SVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEA 315
           NR EAA+R +K+++ SN     S  +L+++F +SSP   KP F N+LL + + +KLP++A
Sbjct: 56  NRPEAAQRLIKSIVLSNASPFTSPHELFSLFSVSSPY-YKPTFANILLSILSSAKLPSDA 114

Query: 314 TELYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQS 135
            +LY   + D    SL + N+ LE LV+ NQY + L++F + V  GFR D+F+YGKA+Q+
Sbjct: 115 LQLYASTKADGTRLSLDSINVLLECLVSCNQYDRALDLFDEIVCMGFRPDKFTYGKAVQA 174

Query: 134 AVKLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           AVK+GDLK   E  + M+KS   P+ F YN LI G CKE++I D
Sbjct: 175 AVKIGDLKRACEIFDGMEKSRTRPNVFVYNNLISGFCKEKKIRD 218


>ref|XP_004305365.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 802

 Score =  137 bits (344), Expect = 2e-30
 Identities = 80/164 (48%), Positives = 106/164 (64%), Gaps = 6/164 (3%)
 Frame = -2

Query: 476 RTEAAKRFLKTLIAS----NSVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEATE 309
           RT+AA RF+K+LI      +S S LY +F +S+P  T P F +MLL    +SK+P +A E
Sbjct: 53  RTDAAARFIKSLILPTSPFSSPSDLYDLFSLSAPSIT-PAFSDMLLTACTDSKMPKQAVE 111

Query: 308 LYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVN--RGFRLDQFSYGKAIQS 135
           LY L+RK    PSLA  N  LE LV S  + +TLE+F       +G + D+F+YGKA+Q+
Sbjct: 112 LYALMRKSDLRPSLATLNQLLECLVGSKMFEETLELFSQIFESGKGIKPDKFTYGKAVQA 171

Query: 134 AVKLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           AVKLGDLK   E +  MK   + P+ F +NVLIGGLCKERR+ D
Sbjct: 172 AVKLGDLKRAGEIVESMKTMRLVPNVFIFNVLIGGLCKERRMRD 215


>ref|XP_006604616.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 409

 Score =  133 bits (335), Expect = 2e-29
 Identities = 76/162 (46%), Positives = 104/162 (64%), Gaps = 4/162 (2%)
 Frame = -2

Query: 476 RTEAAKRFLKTLI----ASNSVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEATE 309
           RT  A+RFL++L+    A +S+S+L+          +KPLF + LL L + SK+ +EAT+
Sbjct: 77  RTVTARRFLRSLLLTKTAFSSLSELHAHV-------SKPLFSDTLLWLCSVSKMLDEATD 129

Query: 308 LYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAV 129
           LY+ +RKD   PS  + N  L  LV S  + KTL VF D V+ G R D  +YGKA+Q+AV
Sbjct: 130 LYSSMRKDGFIPSTRSVNRLLRTLVDSRHFEKTLPVFADVVDSGIRPDAVTYGKAVQAAV 189

Query: 128 KLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
            L DL  G E M  M+K G+ PS FAYN+++GGLCK RRI+D
Sbjct: 190 MLKDLDKGFELMKSMEKDGMGPSVFAYNLILGGLCKVRRIKD 231



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
 Frame = -2

Query: 473 TEAAKRFLKTLIASNSVSQLYTVFCISSPPPTKP--LFFNMLLLLYAESKLPNEATELYN 300
           T +  R L+TL+ S    +   VF        +P  + +   +      K  ++  EL  
Sbjct: 143 TRSVNRLLRTLVDSRHFEKTLPVFADVVDSGIRPDAVTYGKAVQAAVMLKDLDKGFELMK 202

Query: 299 LIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAVKLG 120
            + KD   PS+ A+NL L  L    +     ++F   + R    +  +Y   I    K+G
Sbjct: 203 SMEKDGMGPSVFAYNLILGGLCKVRRIKDARKLFDKTIQRNVVPNTVTYNTLIDGYCKVG 262

Query: 119 DLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           D++       RM++  V  +   YN L+ GLC   R+ED
Sbjct: 263 DIEEAFGFKERMREQNVECNLVTYNSLLNGLCGSGRVED 301


>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 817

 Score =  130 bits (326), Expect = 2e-28
 Identities = 72/163 (44%), Positives = 100/163 (61%), Gaps = 4/163 (2%)
 Frame = -2

Query: 479 NRTEAAKRFLKTLIASNSV----SQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEAT 312
           N  EAA    K+LI + S     S L++ F   S P  +    +MLL +  +SK+  EA 
Sbjct: 68  NCNEAAYSLAKSLILTKSTFSSPSDLFSCFSACSIP-LRITLSDMLLSVCCKSKMLREAV 126

Query: 311 ELYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSA 132
           ELY  +R+D   PSL + +L    LV   Q+ K +++F++  N GFR D F Y KAIQ+A
Sbjct: 127 ELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAA 186

Query: 131 VKLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           VKL +LK G+E ++ M+K GV P+ F YNVLIGGLC+E+RI D
Sbjct: 187 VKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229


>gb|ESW34841.1| hypothetical protein PHAVU_001G185900g [Phaseolus vulgaris]
          Length = 776

 Score =  128 bits (322), Expect = 7e-28
 Identities = 71/158 (44%), Positives = 98/158 (62%)
 Frame = -2

Query: 476 RTEAAKRFLKTLIASNSVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEATELYNL 297
           RT  A+RFLK+L  S +    ++  C      +KPLF + LL L + SK+ NEAT+LY  
Sbjct: 57  RTITARRFLKSLFLSKTT---FSSLCELHAHVSKPLFSDTLLWLCSVSKMLNEATDLYFS 113

Query: 296 IRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAVKLGD 117
           +RKD   PS  + N  L  LV S  + KTL VF D V+   + D  +YGKA+Q+AV L D
Sbjct: 114 MRKDGFLPSTRSVNRLLRTLVASRHFEKTLSVFADVVDSDIQPDVITYGKAVQAAVMLKD 173

Query: 116 LKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           L  G + ++ M+K G+ P  FAYN+++GGLCK RRI+D
Sbjct: 174 LDKGFDLVSSMEKEGLGPYVFAYNLILGGLCKVRRIKD 211



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
 Frame = -2

Query: 473 TEAAKRFLKTLIASNSVSQLYTVFC--ISSPPPTKPLFFNMLLLLYAESKLPNEATELYN 300
           T +  R L+TL+AS    +  +VF   + S      + +   +      K  ++  +L +
Sbjct: 123 TRSVNRLLRTLVASRHFEKTLSVFADVVDSDIQPDVITYGKAVQAAVMLKDLDKGFDLVS 182

Query: 299 LIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAVKLG 120
            + K+   P + A+NL L  L    +     ++F + + R    +  +Y   I    K+G
Sbjct: 183 SMEKEGLGPYVFAYNLILGGLCKVRRIKDARKLFDEMIRRNIAPNTVTYNTLIDGYCKVG 242

Query: 119 DLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           +L+       RMK+  V  +   YN L+ GLC   R+E+
Sbjct: 243 ELEEAFSFKERMKELNVECNLVTYNCLLSGLCGSGRVEE 281


>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571446303|ref|XP_006577051.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 777

 Score =  128 bits (322), Expect = 7e-28
 Identities = 74/162 (45%), Positives = 102/162 (62%), Gaps = 4/162 (2%)
 Frame = -2

Query: 476 RTEAAKRFLKTLI----ASNSVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEATE 309
           RT  A+RFL++L+    A +S+S+L+          +KP F + LL L + SK+ +EAT+
Sbjct: 56  RTITARRFLRSLLLTKTAFSSLSELHAHV-------SKPFFSDNLLWLCSVSKMLDEATD 108

Query: 308 LYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAV 129
           LY+ +RKD   PS  + N  L  LV S  + KTL VF D ++ G R D  +YGKA+Q+AV
Sbjct: 109 LYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAV 168

Query: 128 KLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
            L DL  G E M  M K G+ PS FAYN+++GGLCK RRI+D
Sbjct: 169 MLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKD 210



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
 Frame = -2

Query: 473 TEAAKRFLKTLIASNSVSQLYTVFCISSPPPTKP--LFFNMLLLLYAESKLPNEATELYN 300
           T +  R L+TL+ S    +   VF       T+P  + +   +      K  ++  EL  
Sbjct: 122 TRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMK 181

Query: 299 LIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAVKLG 120
            + KD   PS+ A+NL L  L    +     ++F + + R    +  +Y   I    K+G
Sbjct: 182 SMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVG 241

Query: 119 DLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
            ++  L    RMK+  V  +   YN L+ GLC   R++D
Sbjct: 242 GIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDD 280


>ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata] gi|297317348|gb|EFH47770.1| hypothetical protein
           ARALYDRAFT_350399 [Arabidopsis lyrata subsp. lyrata]
          Length = 1202

 Score =  124 bits (310), Expect = 2e-26
 Identities = 69/164 (42%), Positives = 101/164 (61%), Gaps = 5/164 (3%)
 Frame = -2

Query: 479 NRTEAAKRFLKTLIASNSV-----SQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEA 315
           NR E A+  L +L+ S+S       +L++ F +SSP       + +L +L  ESK+ +EA
Sbjct: 442 NRIETARGVLYSLLRSDSAPFTSPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEA 501

Query: 314 TELYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQS 135
            +L+  +R +  FPS  +  L L+ LV + Q+  T+ VFL+ +   FR  +F YGKAIQ+
Sbjct: 502 ADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQA 561

Query: 134 AVKLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           AVKL D+  GLE  NRMK   +SP+ F YNVLI GLCK R+++D
Sbjct: 562 AVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKD 605


>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
           gi|9759377|dbj|BAB10028.1| unnamed protein product
           [Arabidopsis thaliana] gi|28973713|gb|AAO64173.1|
           unknown protein [Arabidopsis thaliana]
           gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis
           thaliana] gi|110737169|dbj|BAF00534.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332004380|gb|AED91763.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  122 bits (306), Expect = 5e-26
 Identities = 68/164 (41%), Positives = 99/164 (60%), Gaps = 5/164 (3%)
 Frame = -2

Query: 479 NRTEAAKRFLKTLIASNSV-----SQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEA 315
           NR E A+  L +L+ S+S       +L++ F +SSP       + +L +L  ESK+ +EA
Sbjct: 69  NRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEA 128

Query: 314 TELYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQS 135
            +L+  +R +  +PS  +  L L+ LV + Q+  T+ VFL+ +   FR  +F YGKAIQ+
Sbjct: 129 ADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQA 188

Query: 134 AVKLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           AVKL D+  GLE  NRMK   + PS F YNVLI GLCK +R+ D
Sbjct: 189 AVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND 232


>ref|XP_006287082.1| hypothetical protein CARUB_v10000242mg [Capsella rubella]
           gi|482555788|gb|EOA19980.1| hypothetical protein
           CARUB_v10000242mg [Capsella rubella]
          Length = 818

 Score =  119 bits (298), Expect = 4e-25
 Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 5/164 (3%)
 Frame = -2

Query: 479 NRTEAAKRFLKTLIASNSV-----SQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEA 315
           NR E A+  L  ++ S+S+      +L++ F +SSP       + +L ++  +SK+  EA
Sbjct: 71  NRIETARGVLSAMLRSDSMPFTSPKELFSAFSLSSPSLKHDFSYMLLSVVLTDSKMVTEA 130

Query: 314 TELYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQS 135
            +L+  +R +  FPS  +  L L+ LV + Q+   + VFL+ ++  FR  +F YGKAI +
Sbjct: 131 ADLFFALRNEGIFPSSDSLTLLLDHLVKAKQFRVAINVFLNILDSDFRPSKFMYGKAILA 190

Query: 134 AVKLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           AVKLGD   GL+  NRMK   +SPS F YNVLI GLCK R++++
Sbjct: 191 AVKLGDTGKGLKLFNRMKHDRISPSVFIYNVLIDGLCKSRKMKE 234


>gb|EOY08106.1| Pentatricopeptide (PPR) repeat-containing protein, putative isoform
           2 [Theobroma cacao]
          Length = 684

 Score =  110 bits (276), Expect = 1e-22
 Identities = 53/98 (54%), Positives = 73/98 (74%)
 Frame = -2

Query: 296 IRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAVKLGD 117
           +RK+   PS+ + NL LE+LV+ N++ KT+ +F + +  GFR ++F YGKA+Q+AVKLGD
Sbjct: 1   MRKEGMQPSITSLNLLLESLVSLNKFDKTINLFEEIIESGFRPNKFMYGKAVQAAVKLGD 60

Query: 116 LKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           LK   E ++ MKK GVSPS F YN LIGG+CKE+RI D
Sbjct: 61  LKRANEYVHSMKKKGVSPSLFIYNALIGGVCKEKRIRD 98


>ref|XP_002316451.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550330600|gb|EEF02622.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 724

 Score =  109 bits (273), Expect = 3e-22
 Identities = 54/119 (45%), Positives = 80/119 (67%)
 Frame = -2

Query: 359 MLLLLYAESKLPNEATELYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNR 180
           MLL + +ESK+ ++ +ELY+ +R++   PS     + +E+LV S ++   L++F + V  
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 179 GFRLDQFSYGKAIQSAVKLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           GFR D+  YG+A+ +AVKLGDLK  +E    MK+  V P+ F YNVLIGGLCKE+RI D
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRD 119


>ref|XP_006399727.1| hypothetical protein EUTSA_v10015810mg, partial [Eutrema
           salsugineum] gi|557100817|gb|ESQ41180.1| hypothetical
           protein EUTSA_v10015810mg, partial [Eutrema salsugineum]
          Length = 663

 Score =  102 bits (255), Expect = 4e-20
 Identities = 53/119 (44%), Positives = 75/119 (63%)
 Frame = -2

Query: 359 MLLLLYAESKLPNEATELYNLIRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNR 180
           ML  +  ESK+ +EAT+L+  +R +  FPS  +  L  + L  + Q+  T+ VFL+ +  
Sbjct: 1   MLFSVLTESKMVSEATDLFFALRNEGIFPSSDSLTLLFDHLGKARQFRVTINVFLNILES 60

Query: 179 GFRLDQFSYGKAIQSAVKLGDLKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
            +R  +F YGKA+ +AVKL DL  GLE  NRMK   +SP+ F YNVLI GLCK  R++D
Sbjct: 61  DYRPSKFMYGKAVYAAVKLSDLGKGLELFNRMKHDRISPTVFIYNVLIDGLCKAGRMKD 119


>ref|XP_004494138.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Cicer arietinum]
          Length = 773

 Score =  100 bits (249), Expect = 2e-19
 Identities = 56/158 (35%), Positives = 89/158 (56%)
 Frame = -2

Query: 476 RTEAAKRFLKTLIASNSVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLPNEATELYNL 297
           RT+ A+R+LK L+ S    QL+       P  +KP+F   LL   +     N+  ++Y+ 
Sbjct: 58  RTKTAQRYLKFLLPS----QLH-------PLVSKPIFLQTLLPFCSNPNTLNQVMDIYHS 106

Query: 296 IRKDANFPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAVKLGD 117
           ++KD     +   N  L+ LV S Q+ + L +F + V  G R D FSY K +++AV L D
Sbjct: 107 MKKDGFTHPMVFLNPILQTLVDSQQFEEALTLFTELVESGIRPDVFSYAKVVRAAVMLKD 166

Query: 116 LKGGLEQMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
           L    E +N M+K G+ P  + YN+++GGLCK ++I+D
Sbjct: 167 LNKCFELLNSMEKDGIRPFVYVYNLVLGGLCKVKKIKD 204



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
 Frame = -2

Query: 452 LKTLIASNSVSQLYTVFCISSPPPTKPLFFNMLLLLYAESKLP--NEATELYNLIRKDAN 279
           L+TL+ S    +  T+F        +P  F+   ++ A   L   N+  EL N + KD  
Sbjct: 123 LQTLVDSQQFEEALTLFTELVESGIRPDVFSYAKVVRAAVMLKDLNKCFELLNSMEKDGI 182

Query: 278 FPSLAAFNLFLEALVTSNQYYKTLEVFLDAVNRGFRLDQFSYGKAIQSAVKLGDLKGGLE 99
            P +  +NL L  L    +     ++F + ++R    +  +Y   I    K+G+++    
Sbjct: 183 RPFVYVYNLVLGGLCKVKKIKDARKLFDEMIHRKVVPNTVTYNTLIDGYCKVGEIEEAFS 242

Query: 98  QMNRMKKSGVSPSGFAYNVLIGGLCKERRIED 3
              RMK     P+   YN L+GGLC   R+ED
Sbjct: 243 LKARMKAPYSEPNCVTYNCLLGGLCGLGRLED 274