BLASTX nr result
ID: Rauwolfia21_contig00052411
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00052411 (282 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containi... 132 4e-29 ref|XP_002324235.2| pentatricopeptide repeat-containing family p... 130 1e-28 ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28 emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera] 130 1e-28 gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily p... 127 1e-27 gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus pe... 125 6e-27 ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25 gb|AEP33763.1| organelle transcript processing 82, partial [Isat... 119 4e-25 ref|XP_002892433.1| pentatricopeptide repeat-containing protein ... 119 4e-25 gb|AEP33764.1| organelle transcript processing 82, partial [Iber... 119 5e-25 gb|AEP33760.1| organelle transcript processing 82, partial [Caps... 119 5e-25 ref|XP_002524455.1| pentatricopeptide repeat-containing protein,... 118 9e-25 ref|XP_006842814.1| hypothetical protein AMTR_s00081p00056740 [A... 117 1e-24 ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha... 117 2e-24 gb|AEP33772.1| organelle transcript processing 82, partial [Drab... 117 2e-24 gb|AEP33758.1| organelle transcript processing 82, partial [Barb... 117 2e-24 gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis] 116 4e-24 gb|AEP33773.1| organelle transcript processing 82, partial [Lobu... 116 4e-24 gb|AEP33761.1| organelle transcript processing 82, partial [Cruc... 116 4e-24 gb|ESW26970.1| hypothetical protein PHAVU_003G162300g [Phaseolus... 115 5e-24 >ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Solanum tuberosum] Length = 731 Score = 132 bits (333), Expect = 4e-29 Identities = 66/90 (73%), Positives = 74/90 (82%) Frame = +3 Query: 9 EARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACA 188 +AR+LFDE+PVRDVVSWNA+ISGYA+VG F++AL LFEEMR V P STLLSVLSACA Sbjct: 209 DARELFDEMPVRDVVSWNAMISGYAQVGRFEEALVLFEEMRNVNVEPSVSTLLSVLSACA 268 Query: 189 RSGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 R G L LGNWVRSWI+D LG N LVNAL Sbjct: 269 RVGELKLGNWVRSWIEDHGLGLNIRLVNAL 298 Score = 79.3 bits (194), Expect = 5e-13 Identities = 35/75 (46%), Positives = 49/75 (65%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 AR LF+ + +D+VSWN +I GY G + AL +F M++ + P+ TLLS+L ACA Sbjct: 311 ARMLFEGLEEKDLVSWNVMIGGYTHTGYYKDALSVFHRMQQEVIDPNDVTLLSILPACAH 370 Query: 192 SGALDLGNWVRSWID 236 GALDLG W+ +ID Sbjct: 371 LGALDLGKWIHVYID 385 Score = 55.1 bits (131), Expect = 1e-05 Identities = 27/67 (40%), Positives = 44/67 (65%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+++F + ++ + S+N +ISG A G +AL LF +M + ++PD T +SVLSAC Sbjct: 413 AKQVFQGMKMKTLASYNVMISGLAMHGDAYEALELFRKMTEESMKPDDITFVSVLSACNH 472 Query: 192 SGALDLG 212 +G +DLG Sbjct: 473 AGLVDLG 479 >ref|XP_002324235.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|550317719|gb|EEF02800.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 736 Score = 130 bits (328), Expect = 1e-28 Identities = 66/93 (70%), Positives = 78/93 (83%), Gaps = 1/93 (1%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 L EAR+LFDEIPVRDVVSWNA+ISGYA+ G ++A+ FEEMR+AKV P+ ST+LSVLSA Sbjct: 210 LDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSA 269 Query: 183 CARSG-ALDLGNWVRSWIDDCRLGSNCHLVNAL 278 CA+SG +L LGNWVRSWI+D LGSN LVN L Sbjct: 270 CAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGL 302 Score = 83.6 bits (205), Expect = 3e-14 Identities = 37/78 (47%), Positives = 53/78 (67%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 L EA LF++I ++VVSWN +I GY + + +ALGLF M ++ + P+ T LS+L A Sbjct: 312 LEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPA 371 Query: 183 CARSGALDLGNWVRSWID 236 CA GALDLG WV +++D Sbjct: 372 CANLGALDLGKWVHAYVD 389 Score = 61.6 bits (148), Expect = 1e-07 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 L A+++FD + + + +WNA+ISG+A G D ALGLF M PD T + VL+A Sbjct: 415 LAAAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTA 474 Query: 183 CARSGALDLG-NWVRSWIDDCRL 248 C +G L LG + S I D ++ Sbjct: 475 CKHAGLLSLGRRYFSSMIQDYKV 497 >ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Vitis vinifera] Length = 738 Score = 130 bits (328), Expect = 1e-28 Identities = 60/92 (65%), Positives = 80/92 (86%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 L +AR+LF+EIPVRD VSWNA+I+GYA+ G F++AL F+EM++A V P++ST+++VLSA Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273 Query: 183 CARSGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 CA+SG+L+LGNWVRSWI+D LGSN LVNAL Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVNAL 305 Score = 82.4 bits (202), Expect = 6e-14 Identities = 37/83 (44%), Positives = 57/83 (68%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 L +AR LF+ I +D++SWN +I GY+ + + +AL LF +M+++ V P+ T +S+L A Sbjct: 315 LDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPA 374 Query: 183 CARSGALDLGNWVRSWIDDCRLG 251 CA GALDLG W+ ++ID LG Sbjct: 375 CAYLGALDLGKWIHAYIDKKFLG 397 Score = 56.2 bits (134), Expect = 4e-06 Identities = 28/67 (41%), Positives = 42/67 (62%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+++F + + + SWNA+ISG A G + AL LF +MR PD T + VLSAC+ Sbjct: 420 AKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSH 479 Query: 192 SGALDLG 212 +G ++LG Sbjct: 480 AGLVELG 486 >emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera] Length = 748 Score = 130 bits (328), Expect = 1e-28 Identities = 60/92 (65%), Positives = 80/92 (86%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 L +AR+LF+EIPVRD VSWNA+I+GYA+ G F++AL F+EM++A V P++ST+++VLSA Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273 Query: 183 CARSGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 CA+SG+L+LGNWVRSWI+D LGSN LVNAL Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVNAL 305 Score = 82.4 bits (202), Expect = 6e-14 Identities = 37/83 (44%), Positives = 57/83 (68%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 L +AR LF+ I +D++SWN +I GY+ + + +AL LF +M+++ V P+ T +S+L A Sbjct: 315 LDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPA 374 Query: 183 CARSGALDLGNWVRSWIDDCRLG 251 CA GALDLG W+ ++ID LG Sbjct: 375 CAYLGALDLGKWIHAYIDKKFLG 397 Score = 56.2 bits (134), Expect = 4e-06 Identities = 28/67 (41%), Positives = 42/67 (62%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+++F + + + SWNA+ISG A G + AL LF +MR PD T + VLSAC+ Sbjct: 420 AKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSH 479 Query: 192 SGALDLG 212 +G ++LG Sbjct: 480 AGLVELG 486 >gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative [Theobroma cacao] Length = 847 Score = 127 bits (320), Expect = 1e-27 Identities = 61/89 (68%), Positives = 75/89 (84%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 ARKLFDEIP+RDVVSWNA+I+GYA+ G ++AL FEEM A V P++STL+SVLSACA+ Sbjct: 273 ARKLFDEIPIRDVVSWNAMIAGYAQTGQHEEALAFFEEMIGANVVPNESTLVSVLSACAQ 332 Query: 192 SGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 SG+L+LG WVRSWI++ LGSN HL NAL Sbjct: 333 SGSLELGTWVRSWINEHGLGSNIHLANAL 361 Score = 81.6 bits (200), Expect = 1e-13 Identities = 35/72 (48%), Positives = 48/72 (66%) Frame = +3 Query: 21 LFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACARSGA 200 LF+ + RDV+SWN +I GY + + +ALGLF M ++ + P T LSVL ACA GA Sbjct: 377 LFEGLQQRDVISWNVMIGGYTHMSYYKEALGLFRRMLRSNIEPSDVTFLSVLPACANLGA 436 Query: 201 LDLGNWVRSWID 236 LDLG W+ ++ID Sbjct: 437 LDLGKWIHAYID 448 Score = 65.1 bits (157), Expect = 9e-09 Identities = 31/67 (46%), Positives = 46/67 (68%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+++F+ + +++ SWNA+ISG A GL D+AL LF +M ++PD T + VLSAC Sbjct: 476 AQQVFNGMEQKNLASWNAMISGLAMHGLADKALELFSQMMGGGLKPDDITFVGVLSACTH 535 Query: 192 SGALDLG 212 +G LDLG Sbjct: 536 AGLLDLG 542 >gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica] Length = 714 Score = 125 bits (314), Expect = 6e-27 Identities = 61/90 (67%), Positives = 75/90 (83%) Frame = +3 Query: 9 EARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACA 188 +AR LFDEIP RDVVSWNA+ISGYA+ G F++AL LF EMRKA V P++ST++ VLSACA Sbjct: 192 DARYLFDEIPGRDVVSWNAMISGYAQSGRFEEALALFSEMRKANVSPNESTMVVVLSACA 251 Query: 189 RSGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 +SG+L+LG WV SWI++ LGSN LVNAL Sbjct: 252 QSGSLELGKWVGSWIENRGLGSNLRLVNAL 281 Score = 76.6 bits (187), Expect = 3e-12 Identities = 34/75 (45%), Positives = 47/75 (62%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 AR LFD + RDV+SWN +I GY + +AL LF M ++ P+ T L +L AC+ Sbjct: 294 ARSLFDGLQQRDVISWNVMIGGYTHKSHYKEALALFRLMLRSNADPNDVTFLGILPACSH 353 Query: 192 SGALDLGNWVRSWID 236 GALDLG W+ ++ID Sbjct: 354 LGALDLGKWIHAYID 368 Score = 57.4 bits (137), Expect = 2e-06 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+++F+ + + + SWNA+ISG A G AL LF +M +PD+ T + VLSAC Sbjct: 396 AKQVFNGMEAKSLASWNAMISGLAMHGHAHTALELFSKMADEGFKPDEITFVGVLSACNH 455 Query: 192 SGALDLG-NWVRSWIDDCRLGS 254 G +DLG + S I D + + Sbjct: 456 GGLVDLGRQYFSSMITDYHISA 477 >ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Cucumis sativus] gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Cucumis sativus] Length = 734 Score = 120 bits (300), Expect = 2e-25 Identities = 60/89 (67%), Positives = 76/89 (85%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 AR+LFDE+PV+DVVSWNA+I+GYA++G +AL LFE+MRKA V P++ST++SVLSACA+ Sbjct: 214 ARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQ 273 Query: 192 SGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 S ALDLGN +RSWI+D L SN LVNAL Sbjct: 274 SNALDLGNSMRSWIEDRGLCSNLKLVNAL 302 Score = 80.9 bits (198), Expect = 2e-13 Identities = 36/78 (46%), Positives = 53/78 (67%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 L AR+LFD++ RDV+SWN +I GY + + +AL LF EM + V P + T LS+L + Sbjct: 312 LQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPS 371 Query: 183 CARSGALDLGNWVRSWID 236 CA GA+DLG W+ ++I+ Sbjct: 372 CAHLGAIDLGKWIHAYIN 389 Score = 61.2 bits (147), Expect = 1e-07 Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 1/80 (1%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 AR++FD + ++ + SWNA+I G A G D+A LF +M + P++ T + +LSAC Sbjct: 416 ARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKH 475 Query: 192 SGALDLG-NWVRSWIDDCRL 248 +G +DLG + S + D ++ Sbjct: 476 AGLVDLGQQFFSSMVQDYKI 495 >gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria] Length = 671 Score = 119 bits (298), Expect = 4e-25 Identities = 57/89 (64%), Positives = 70/89 (78%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+KLFDEIPV+DVVSWNA+ISGYA G + +AL LFEEM K VRPD+ST ++VLSACA Sbjct: 149 AQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAH 208 Query: 192 SGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 SG+++LG V SW+DD SN +VNAL Sbjct: 209 SGSIELGRQVHSWVDDHGFDSNLKIVNAL 237 Score = 77.0 bits (188), Expect = 2e-12 Identities = 34/72 (47%), Positives = 49/72 (68%) Frame = +3 Query: 21 LFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACARSGA 200 LF + +DV+SWN LI GY + L+ +AL LF+EM ++ P+ T+LSVL ACA GA Sbjct: 253 LFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312 Query: 201 LDLGNWVRSWID 236 +D+G W+ +ID Sbjct: 313 IDIGRWIHVYID 324 Score = 62.8 bits (151), Expect = 5e-08 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A ++F+ + + + SWNA+I G+A G D + LF MRK + PD T + +LSAC+ Sbjct: 353 AHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSH 412 Query: 192 SGALDLGNWV-RSWIDDCRL 248 SG LDLG + RS D ++ Sbjct: 413 SGMLDLGRHIFRSMTQDYKM 432 >ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 741 Score = 119 bits (298), Expect = 4e-25 Identities = 55/89 (61%), Positives = 73/89 (82%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+KLFDEIPV+DVVSWNA+ISGYA G + +AL LF+EM K +RPD+ST+++V+SACA+ Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQ 278 Query: 192 SGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 SG+++LG V SWIDD GSN +VN+L Sbjct: 279 SGSIELGRQVHSWIDDHGFGSNLKIVNSL 307 Score = 79.0 bits (193), Expect = 6e-13 Identities = 34/72 (47%), Positives = 51/72 (70%) Frame = +3 Query: 21 LFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACARSGA 200 LF+ + +DV+SWN LI GY + L+ +AL LF+EM ++ RP+ T+LS+L ACA GA Sbjct: 323 LFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGA 382 Query: 201 LDLGNWVRSWID 236 +D+G W+ +ID Sbjct: 383 IDIGRWIHVYID 394 Score = 65.1 bits (157), Expect = 9e-09 Identities = 31/70 (44%), Positives = 44/70 (62%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A ++F+ I + + SWNA+I G+A G D A +F MRK + PD T + +LSAC+R Sbjct: 423 AHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSR 482 Query: 192 SGALDLGNWV 221 SG LDLG + Sbjct: 483 SGMLDLGRHI 492 >gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara] Length = 666 Score = 119 bits (297), Expect = 5e-25 Identities = 55/89 (61%), Positives = 73/89 (82%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+K+FDEIPV+DVVSWNA+ISGYA G + +AL LF++M K VRPD+ST+++V+SACA+ Sbjct: 176 AQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 235 Query: 192 SGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 SG+++LG V SWIDD GSN +VNAL Sbjct: 236 SGSIELGRQVHSWIDDHGFGSNLKIVNAL 264 Score = 80.5 bits (197), Expect = 2e-13 Identities = 34/72 (47%), Positives = 51/72 (70%) Frame = +3 Query: 21 LFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACARSGA 200 LF+ +P +DV+SWN LI GY + L+ +AL LF+EM ++ P+ T+LS+L ACA GA Sbjct: 280 LFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 339 Query: 201 LDLGNWVRSWID 236 +D+G W+ +ID Sbjct: 340 IDIGRWIHVYID 351 Score = 62.8 bits (151), Expect = 5e-08 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A ++F+ I + + SWNA+I G+A G D + +F MRK + PD T + +LSAC+ Sbjct: 380 AHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSH 439 Query: 192 SGALDLGNWV-RSWIDDCRL 248 SG LDLG + RS D ++ Sbjct: 440 SGMLDLGRHIFRSMTQDYKM 459 >gb|AEP33760.1| organelle transcript processing 82, partial [Capsella bursa-pastoris] Length = 706 Score = 119 bits (297), Expect = 5e-25 Identities = 56/92 (60%), Positives = 73/92 (79%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 + A+K+FDEIPV+DVVSWNALISGYA G + +AL LF+EM K V+PD+ST+++VLSA Sbjct: 185 IXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSA 244 Query: 183 CARSGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 CA+S +++LG V SWIDD GSN +VNAL Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNAL 276 Score = 78.6 bits (192), Expect = 8e-13 Identities = 34/75 (45%), Positives = 52/75 (69%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A LF+ + +DV+SWN LI GY + L+ +AL LF+EM ++ P++ T+LS+L ACA Sbjct: 289 ASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAH 348 Query: 192 SGALDLGNWVRSWID 236 GA+D+G W+ +ID Sbjct: 349 LGAIDIGRWIHVYID 363 Score = 65.1 bits (157), Expect = 9e-09 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+++FD + R + SWNA+I G+A G + A +F MRK + PD T + +LSAC+ Sbjct: 392 AQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSH 451 Query: 192 SGALDLGNWV-RSWIDDCRL 248 SG LDLG + RS +D ++ Sbjct: 452 SGMLDLGRHIFRSMTEDYKI 471 >ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223536243|gb|EEF37895.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 486 Score = 118 bits (295), Expect = 9e-25 Identities = 58/92 (63%), Positives = 74/92 (80%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 L +A +LFDEIPVRDVVSWNA+I+GY + G F++AL FEEM +A V P+ STLLSVLSA Sbjct: 206 LDQALELFDEIPVRDVVSWNAMIAGYTQSGRFEEALIFFEEMLRANVTPNMSTLLSVLSA 265 Query: 183 CARSGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 CA+SG+L +GNWV SWI++ L SN ++NAL Sbjct: 266 CAQSGSLKMGNWVSSWIEEHGLESNIKVMNAL 297 Score = 79.7 bits (195), Expect = 4e-13 Identities = 36/78 (46%), Positives = 52/78 (66%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 L A LF+ I ++V+SWN +I GY + + +ALGLF +M ++ V P+ TLLS+L A Sbjct: 307 LENALHLFEGIKNKNVISWNVMIGGYTHLSCYKEALGLFRQMLQSNVEPNDVTLLSILPA 366 Query: 183 CARSGALDLGNWVRSWID 236 CA GAL LG W+ ++ID Sbjct: 367 CANLGALGLGKWIHAYID 384 Score = 64.3 bits (155), Expect = 2e-08 Identities = 31/68 (45%), Positives = 43/68 (63%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A ++FD + + + SWNA+ISG+A G D A+ LF M K + PD T + VLSAC Sbjct: 412 ANQIFDGMNPKSLASWNAMISGFAMHGQADLAISLFSRMTKEGLVPDNITFIGVLSACNH 471 Query: 192 SGALDLGN 215 +G LDLG+ Sbjct: 472 AGLLDLGH 479 >ref|XP_006842814.1| hypothetical protein AMTR_s00081p00056740 [Amborella trichopoda] gi|548844970|gb|ERN04489.1| hypothetical protein AMTR_s00081p00056740 [Amborella trichopoda] Length = 406 Score = 117 bits (294), Expect = 1e-24 Identities = 57/92 (61%), Positives = 72/92 (78%) Frame = +3 Query: 3 LYEARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSA 182 L EARKLFD+ PV+DVVSWNA+ISGY + G D+AL LFE+M RP+ ST+ SVLSA Sbjct: 215 LNEARKLFDQCPVKDVVSWNAIISGYTQSGAHDEALNLFEKMVGDGFRPNVSTMASVLSA 274 Query: 183 CARSGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 CA SG++++G WV SWI + RLGSN +LVN+L Sbjct: 275 CASSGSIEIGRWVHSWIQENRLGSNPNLVNSL 306 Score = 77.0 bits (188), Expect = 2e-12 Identities = 36/75 (48%), Positives = 50/75 (66%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A LFDE+P RD VSWN +I G A G + +AL LF M+ + P++ T L++L CA+ Sbjct: 319 AHHLFDEMPERDRVSWNVMIGGCAHAGFYKEALSLFRRMQLFE-EPNEVTFLTILPVCAQ 377 Query: 192 SGALDLGNWVRSWID 236 GALDLG W+ ++ID Sbjct: 378 LGALDLGKWIHAYID 392 >ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana] gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana] gi|332190118|gb|AEE28239.1| chloroplast RNA editing factor [Arabidopsis thaliana] Length = 741 Score = 117 bits (293), Expect = 2e-24 Identities = 55/89 (61%), Positives = 72/89 (80%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+KLFDEIPV+DVVSWNA+ISGYA G + +AL LF++M K VRPD+ST+++V+SACA+ Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278 Query: 192 SGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 SG+++LG V WIDD GSN +VNAL Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNAL 307 Score = 81.3 bits (199), Expect = 1e-13 Identities = 34/72 (47%), Positives = 51/72 (70%) Frame = +3 Query: 21 LFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACARSGA 200 LF+ +P +DV+SWN LI GY + L+ +AL LF+EM ++ P+ T+LS+L ACA GA Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382 Query: 201 LDLGNWVRSWID 236 +D+G W+ +ID Sbjct: 383 IDIGRWIHVYID 394 Score = 63.2 bits (152), Expect = 4e-08 Identities = 30/70 (42%), Positives = 44/70 (62%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A ++F+ I + + SWNA+I G+A G D + LF MRK ++PD T + +LSAC+ Sbjct: 423 AHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSH 482 Query: 192 SGALDLGNWV 221 SG LDLG + Sbjct: 483 SGMLDLGRHI 492 >gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa] Length = 526 Score = 117 bits (293), Expect = 2e-24 Identities = 55/89 (61%), Positives = 72/89 (80%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+KLFDEIPV+DVVSWNA+ISGYA G + +AL LF++M K VRPD+ST+++V+SACA+ Sbjct: 173 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 232 Query: 192 SGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 SG+++LG V WIDD GSN +VNAL Sbjct: 233 SGSIELGRQVHLWIDDHGFGSNLKIVNAL 261 Score = 75.5 bits (184), Expect = 7e-12 Identities = 32/72 (44%), Positives = 50/72 (69%) Frame = +3 Query: 21 LFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACARSGA 200 LF+ + +DV+SWN LI GY + L+ +AL LF+EM ++ P+ T+LS+L ACA GA Sbjct: 277 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 336 Query: 201 LDLGNWVRSWID 236 +D+G W+ +I+ Sbjct: 337 IDIGRWIHVYIN 348 Score = 65.9 bits (159), Expect = 5e-09 Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+++FD + R + SWNA+I G+A G + A LF +MRK + PD T + +LSAC+ Sbjct: 377 AKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSH 436 Query: 192 SGALDLGNWV-RSWIDDCRL 248 SG LDLG + RS D ++ Sbjct: 437 SGMLDLGRHIFRSMSQDYKI 456 >gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna] Length = 710 Score = 117 bits (292), Expect = 2e-24 Identities = 56/89 (62%), Positives = 72/89 (80%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+K+FDEIPV+DVVSWNA+ISGYA G +AL LF+EM K V+PD+ST+++V+SACA+ Sbjct: 188 AQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQ 247 Query: 192 SGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 SG++ LG V SWIDD LGSN +VNAL Sbjct: 248 SGSIQLGRQVHSWIDDHGLGSNLKIVNAL 276 Score = 75.1 bits (183), Expect = 9e-12 Identities = 32/72 (44%), Positives = 49/72 (68%) Frame = +3 Query: 21 LFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACARSGA 200 LF + +DV+SWN +I GY + L+ +AL LF+EM ++ P+ T+LS+L ACA+ GA Sbjct: 292 LFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGA 351 Query: 201 LDLGNWVRSWID 236 +D G W+ +ID Sbjct: 352 IDFGRWIHVYID 363 >gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis] Length = 737 Score = 116 bits (290), Expect = 4e-24 Identities = 54/90 (60%), Positives = 71/90 (78%) Frame = +3 Query: 9 EARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACA 188 EAR +FDE+P RDVV+WNA+ISGY + FD+AL F+EM KA V+P++S+ + +LSACA Sbjct: 215 EARGIFDEMPTRDVVAWNAIISGYTQSAQFDEALAFFKEMVKANVKPNESSFVVILSACA 274 Query: 189 RSGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 +SG L+ GNWVRSWI D LGS+ +VNAL Sbjct: 275 QSGNLESGNWVRSWIGDRGLGSSLRIVNAL 304 Score = 80.1 bits (196), Expect = 3e-13 Identities = 38/75 (50%), Positives = 51/75 (68%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 AR LFD + R+VVSWN +I GY + + +AL LF M ++ V P+ TLL+VL ACA Sbjct: 317 ARDLFDGLRERNVVSWNIMIGGYTHMSDYKEALALFRLMLRSDVEPNDVTLLAVLPACAH 376 Query: 192 SGALDLGNWVRSWID 236 GALDLG W+ ++ID Sbjct: 377 LGALDLGKWIHAYID 391 >gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima] Length = 695 Score = 116 bits (290), Expect = 4e-24 Identities = 55/89 (61%), Positives = 71/89 (79%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+K+FDEIP++DVVSWNA+ISGYA G +AL LF+EM K VRPD+ST++SV+SACA+ Sbjct: 173 AQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ 232 Query: 192 SGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 S +++LG V SWIDD GSN +VNAL Sbjct: 233 SASIELGRQVHSWIDDHGFGSNLKIVNAL 261 Score = 73.9 bits (180), Expect = 2e-11 Identities = 31/72 (43%), Positives = 50/72 (69%) Frame = +3 Query: 21 LFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACARSGA 200 LF+ + +DV+SWN LI GY + L+ +AL LF+EM ++ P+ T+LS+L ACA GA Sbjct: 277 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 336 Query: 201 LDLGNWVRSWID 236 +++G W+ +I+ Sbjct: 337 IEIGRWIHVYIN 348 Score = 66.6 bits (161), Expect = 3e-09 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+++FD I R + SWNA+I G+A G + A +F MRK ++ PD T + +LSAC+ Sbjct: 377 AQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSH 436 Query: 192 SGALDLGNWV-RSWIDDCRL 248 SG LDLG + RS +D ++ Sbjct: 437 SGMLDLGRHIFRSMKEDYKI 456 >gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya wallichii] Length = 710 Score = 116 bits (290), Expect = 4e-24 Identities = 55/89 (61%), Positives = 71/89 (79%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+K+FDEIP++DVVSWNA+ISGYA G +AL LF+EM K VRPD+ST++SV+SACA+ Sbjct: 188 AQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ 247 Query: 192 SGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 S +++LG V SWIDD GSN +VNAL Sbjct: 248 SASIELGRQVHSWIDDHGFGSNLKIVNAL 276 Score = 73.9 bits (180), Expect = 2e-11 Identities = 31/72 (43%), Positives = 50/72 (69%) Frame = +3 Query: 21 LFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACARSGA 200 LF+ + +DV+SWN LI GY + L+ +AL LF+EM ++ P+ T+LS+L ACA GA Sbjct: 292 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 351 Query: 201 LDLGNWVRSWID 236 +++G W+ +I+ Sbjct: 352 IEIGRWIHVYIN 363 Score = 66.6 bits (161), Expect = 3e-09 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A+++FD I R + SWNA+I G+A G + A +F MRK ++ PD T + +LSAC+ Sbjct: 392 AQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSH 451 Query: 192 SGALDLGNWV-RSWIDDCRL 248 SG LDLG + RS +D ++ Sbjct: 452 SGMLDLGRHIFRSMKEDYKI 471 >gb|ESW26970.1| hypothetical protein PHAVU_003G162300g [Phaseolus vulgaris] Length = 733 Score = 115 bits (289), Expect = 5e-24 Identities = 53/90 (58%), Positives = 70/90 (77%) Frame = +3 Query: 9 EARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACA 188 +AR+LFDEIP +DVVSWNA+I+GY + G F++AL F M++A V P+KST++SVLSAC Sbjct: 211 DARRLFDEIPAKDVVSWNAMIAGYVQGGRFEEALACFSSMQEADVSPNKSTMVSVLSACG 270 Query: 189 RSGALDLGNWVRSWIDDCRLGSNCHLVNAL 278 G+L+LG W+ SW+ D LGSN LVNAL Sbjct: 271 HLGSLELGKWIGSWVRDHGLGSNIQLVNAL 300 Score = 83.2 bits (204), Expect = 3e-14 Identities = 39/82 (47%), Positives = 56/82 (68%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 AR+LFD I +D++SWN +I GY+ + L+ +AL LF+ M + KV P+ T L VL ACA Sbjct: 313 ARELFDGIREKDLISWNTMIGGYSYLSLYAEALALFDLMLREKVTPNDVTFLGVLPACAC 372 Query: 192 SGALDLGNWVRSWIDDCRLGSN 257 GALDLG WV +++D G++ Sbjct: 373 LGALDLGKWVHAYVDKILKGTD 394 Score = 58.9 bits (141), Expect = 7e-07 Identities = 31/68 (45%), Positives = 44/68 (64%) Frame = +3 Query: 12 ARKLFDEIPVRDVVSWNALISGYARVGLFDQALGLFEEMRKAKVRPDKSTLLSVLSACAR 191 A ++F R + S NA+ISG+A G ++AL LFEEM K +PD T + VLSAC + Sbjct: 415 AEQVFRSNGSRSLASRNAMISGFAMNGHAERALALFEEMIKEGFQPDDITFVGVLSACTQ 474 Query: 192 SGALDLGN 215 +G +DLG+ Sbjct: 475 AGLVDLGH 482