BLASTX nr result
ID: Rauwolfia21_contig00052382
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00052382
(519 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008999589.1| ribosomal protein L2 (mitochondrion) [Vaccin... 77 3e-12
pir||S46947 ribosomal protein L2 - evening primrose mitochondrio... 77 3e-12
ref|YP_173485.1| ribosomal protein L2 [Nicotiana tabacum] 75 7e-12
ref|XP_004253315.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma... 75 7e-12
dbj|BAD83551.2| ribosomal protein L2 (mitochondrion) [Nicotiana ... 75 7e-12
gb|AAD03036.1| ribosomal protein large subunit 2 [Solanum tubero... 75 7e-12
ref|YP_008802489.1| ribosomal protein L2 (mitochondrion) [Asclep... 75 9e-12
ref|YP_003587229.1| ribosomal protein L2 [Citrullus lanatus] gi|... 74 2e-11
ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|1705... 72 8e-11
gb|AFO69218.1| ribosomal protein L2 (mitochondrion) [Gossypium h... 71 2e-10
gb|AAL48207.1|AF387186_1 ribosomal protein L2 [Lonicera sp. Palm... 71 2e-10
ref|XP_004168533.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma... 69 7e-10
ref|XP_004152990.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma... 69 7e-10
gb|AEN56111.1| ribosomal protein L2 [Cucumis melo subsp. melo] 69 7e-10
ref|YP_004849339.1| ribosomal protein L2 [Cucumis sativus] gi|32... 69 7e-10
gb|AAL48208.1|AF387187_1 ribosomal protein L2 [Gossypium arboreum] 68 1e-09
ref|YP_003587363.1| ribosomal protein L2 [Cucurbita pepo] gi|259... 67 3e-09
gb|AEX57682.1| ribosomal protein L2 (mitochondrion) [Raphanus sa... 66 4e-09
ref|YP_717157.1| ribosomal protein L2 [Brassica napus] gi|375911... 66 4e-09
ref|YP_006666008.1| ribosomal protein large subunit 2 (mitochond... 66 4e-09
>ref|YP_008999589.1| ribosomal protein L2 (mitochondrion) [Vaccinium macrocarpon]
gi|549531664|gb|AGX28803.1| ribosomal protein L2
(mitochondrion) [Vaccinium macrocarpon]
Length = 335
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQET GLVGA++HNESKPK DQGSLPAKPIGEGTKDG
Sbjct: 249 SFRRQETDGLVGAAEHNESKPKTDQGSLPAKPIGEGTKDG 288
>pir||S46947 ribosomal protein L2 - evening primrose mitochondrion
gi|516394|emb|CAA56451.1| 70s mitochondrial ribosomal
protein L2 [Oenothera berteroana]
Length = 332
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQET GLVGA++HNESKPK DQGSLPAKPIGEGTKDG
Sbjct: 246 SFRRQETDGLVGAAEHNESKPKTDQGSLPAKPIGEGTKDG 285
>ref|YP_173485.1| ribosomal protein L2 [Nicotiana tabacum]
Length = 331
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQETLGLVGAS+ NESKPK DQGSLPAKPIGEG KDG
Sbjct: 245 SFRRQETLGLVGASERNESKPKTDQGSLPAKPIGEGLKDG 284
>ref|XP_004253315.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
mitochondrial-like, partial [Solanum lycopersicum]
Length = 366
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQETLGLVGAS+ NESKPK DQGSLPAKPIGEG KDG
Sbjct: 235 SFRRQETLGLVGASERNESKPKTDQGSLPAKPIGEGLKDG 274
>dbj|BAD83551.2| ribosomal protein L2 (mitochondrion) [Nicotiana tabacum]
Length = 331
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQETLGLVGAS+ NESKPK DQGSLPAKPIGEG KDG
Sbjct: 245 SFRRQETLGLVGASERNESKPKTDQGSLPAKPIGEGLKDG 284
>gb|AAD03036.1| ribosomal protein large subunit 2 [Solanum tuberosum]
Length = 296
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQETLGLVGAS+ NESKPK DQGSLPAKPIGEG KDG
Sbjct: 247 SFRRQETLGLVGASERNESKPKTDQGSLPAKPIGEGLKDG 286
>ref|YP_008802489.1| ribosomal protein L2 (mitochondrion) [Asclepias syriaca]
gi|556562328|gb|AGZ63024.1| ribosomal protein L2
(mitochondrion) [Asclepias syriaca]
Length = 299
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQET GLVGAS+HNESKPKM QGSLP KPIGEGTKDG
Sbjct: 230 SFRRQETDGLVGASEHNESKPKMYQGSLPTKPIGEGTKDG 269
>ref|YP_003587229.1| ribosomal protein L2 [Citrullus lanatus]
gi|259156783|gb|ACV96645.1| ribosomal protein L2
[Citrullus lanatus]
Length = 332
Score = 74.3 bits (181), Expect = 2e-11
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQETLGLVG ++HNESKP+ DQGSLPAKPIGEG KDG
Sbjct: 246 SFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDG 285
>ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|170522383|gb|ACB20493.1|
ribosomal protein L2 (mitochondrion) [Carica papaya]
Length = 335
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKD 122
SFRRQETLGLVGA++HNESKPK DQGSLPAKPIGE KD
Sbjct: 249 SFRRQETLGLVGAAEHNESKPKTDQGSLPAKPIGERPKD 287
>gb|AFO69218.1| ribosomal protein L2 (mitochondrion) [Gossypium hirsutum]
Length = 334
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKD 122
SFRRQ+TLGLVGA++HNESKPK DQGSLPAKPIGE KD
Sbjct: 248 SFRRQDTLGLVGAAEHNESKPKTDQGSLPAKPIGERPKD 286
>gb|AAL48207.1|AF387186_1 ribosomal protein L2 [Lonicera sp. Palmer 679]
Length = 228
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTK 119
SFRRQETLGLVGA++HNESKPK +QGSLPAKPIGEG K
Sbjct: 191 SFRRQETLGLVGAAEHNESKPKTNQGSLPAKPIGEGPK 228
>ref|XP_004168533.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
mitochondrial-like [Cucumis sativus]
Length = 455
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQETLGLVG ++H ESK + DQGSLPAKPIGEG KDG
Sbjct: 255 SFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDG 294
>ref|XP_004152990.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
mitochondrial-like [Cucumis sativus]
Length = 386
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQETLGLVG ++H ESK + DQGSLPAKPIGEG KDG
Sbjct: 255 SFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDG 294
>gb|AEN56111.1| ribosomal protein L2 [Cucumis melo subsp. melo]
Length = 354
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQETLGLVG ++H ESK + DQGSLPAKPIGEG KDG
Sbjct: 255 SFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDG 294
>ref|YP_004849339.1| ribosomal protein L2 [Cucumis sativus] gi|325305597|gb|ADZ10766.1|
ribosomal protein L2 [Cucumis sativus]
Length = 341
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQETLGLVG ++H ESK + DQGSLPAKPIGEG KDG
Sbjct: 255 SFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDG 294
>gb|AAL48208.1|AF387187_1 ribosomal protein L2 [Gossypium arboreum]
Length = 270
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/35 (88%), Positives = 34/35 (97%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGE 110
SFRRQ+TLGLVGA++HNESKPK DQGSLPAKPIGE
Sbjct: 234 SFRRQDTLGLVGAAEHNESKPKTDQGSLPAKPIGE 268
>ref|YP_003587363.1| ribosomal protein L2 [Cucurbita pepo] gi|259156826|gb|ACV96687.1|
ribosomal protein L2 [Cucurbita pepo]
Length = 332
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTKDG 125
SFRRQET GLVG ++HNESKP+ D SLPAKPIGEG KDG
Sbjct: 246 SFRRQETDGLVGGAEHNESKPETDPASLPAKPIGEGPKDG 285
>gb|AEX57682.1| ribosomal protein L2 (mitochondrion) [Raphanus sativus]
Length = 349
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTK 119
SFRRQ+TLGLVGA+ HN+SKPK DQGSLPAKPIGE K
Sbjct: 247 SFRRQDTLGLVGAAGHNKSKPKTDQGSLPAKPIGERAK 284
>ref|YP_717157.1| ribosomal protein L2 [Brassica napus] gi|37591104|dbj|BAC98906.1|
ribosomal protein L2 [Brassica napus]
Length = 349
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTK 119
SFRRQ+TLGLVGA+ HN+SKPK DQGSLPAKPIGE K
Sbjct: 247 SFRRQDTLGLVGAAGHNKSKPKTDQGSLPAKPIGERAK 284
>ref|YP_006666008.1| ribosomal protein large subunit 2 (mitochondrion) [Raphanus
sativus] gi|400278283|dbj|BAM36207.1| ribosomal protein
large subunit 2 (mitochondrion) [Raphanus sativus]
gi|400278329|dbj|BAM36252.1| ribosomal protein large
subunit 2 (mitochondrion) [Raphanus sativus]
gi|443298136|gb|AGC81680.1| ribosomal protein L2
(mitochondrion) [Raphanus sativus]
Length = 349
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +3
Query: 6 SFRRQETLGLVGASKHNESKPKMDQGSLPAKPIGEGTK 119
SFRRQ+TLGLVGA+ HN+SKPK DQGSLPAKPIGE K
Sbjct: 247 SFRRQDTLGLVGAAGHNKSKPKTDQGSLPAKPIGERAK 284