BLASTX nr result

ID: Rauwolfia21_contig00052363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00052363
         (398 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY08032.1| RING-H2 finger protein ATL3C, putative [Theobroma...    92   7e-17
emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]    79   6e-13
ref|XP_002519430.1| RING-H2 finger protein ATL3C, putative [Rici...    75   9e-12
ref|XP_006428386.1| hypothetical protein CICLE_v10013424mg [Citr...    67   3e-09
gb|EMJ03988.1| hypothetical protein PRUPE_ppa013731mg [Prunus pe...    64   3e-08

>gb|EOY08032.1| RING-H2 finger protein ATL3C, putative [Theobroma cacao]
          Length = 283

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 52/108 (48%), Positives = 64/108 (59%)
 Frame = +2

Query: 71  SITSPPLHVIRSGSFLTPLMXXXXXXXXXXXXXLAYHYILVRFCVRRQQPTTTTNSLSAL 250
           S+T P      SGSFLTPLM             +AYH +LV++CVRR        S+   
Sbjct: 6   SVTQP------SGSFLTPLMISLAGVVASTLAIVAYHLLLVKYCVRRADEEARNPSIPTQ 59

Query: 251 VEDRPPTGVDQKILETIPIISYATEEGHSFRLDQTECVVCLGELERGE 394
            E    TGV+ KILETIPI+S++ E+   FR DQ+ECVVCLGELE GE
Sbjct: 60  DEGFA-TGVEHKILETIPILSFSREKVKEFRTDQSECVVCLGELEEGE 106


>emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]
          Length = 269

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +2

Query: 65  MESI-TSPPLHVIRSGSFLTPLMXXXXXXXXXXXXXLAYHYILVRFCVRRQQPTTTTNSL 241
           ME+I T PP H     S  TPL+             + YH ++V++C+RRQ        L
Sbjct: 1   MENIGTPPPPHA----SIFTPLLISMVGILGTSLVIVVYHLVIVKYCLRRQ---ADPRPL 53

Query: 242 SALVEDRPPTGVDQKILETIPIISYATEEGHSFRLDQTECVVCLGELE 385
            +    R  TGVD KILETIPI+SY+ ++G  F  DQ+EC VCL ELE
Sbjct: 54  LSAPRXRLSTGVDAKILETIPILSYSKKKGLLFHADQSECAVCLAELE 101


>ref|XP_002519430.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
           gi|223541293|gb|EEF42844.1| RING-H2 finger protein
           ATL3C, putative [Ricinus communis]
          Length = 329

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 39/96 (40%), Positives = 59/96 (61%)
 Frame = +2

Query: 107 GSFLTPLMXXXXXXXXXXXXXLAYHYILVRFCVRRQQPTTTTNSLSALVEDRPPTGVDQK 286
           G F++PL+              AYH +LVRFC+RR++  TT +S +  V++   TGV++ 
Sbjct: 12  GLFVSPLLVSLSIVGCVSMIIAAYHLLLVRFCIRRRRSITTNDSFTIPVQEM-RTGVEED 70

Query: 287 ILETIPIISYATEEGHSFRLDQTECVVCLGELERGE 394
           +L+ IPI+ Y+  +      DQTECV+CLGELE G+
Sbjct: 71  VLKAIPILLYSKVDH-----DQTECVICLGELEDGD 101


>ref|XP_006428386.1| hypothetical protein CICLE_v10013424mg [Citrus clementina]
           gi|557530443|gb|ESR41626.1| hypothetical protein
           CICLE_v10013424mg [Citrus clementina]
          Length = 297

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
 Frame = +2

Query: 65  MESITSPPLHVIRSGSFLTPLMXXXXXXXXXXXXXLAYHYILVRFCVRRQ-QPTTTTNSL 241
           ME + S P      GSFL  L+             +AYH I+    +RR+ +      S 
Sbjct: 1   MEGVGSSPSEN-SGGSFLPHLLISICGITAATLAIVAYHLIVKYLMMRRRLRSERLIISG 59

Query: 242 SALVEDRPPTGVDQKILETIPIISYATEEGHSFRLDQTECVVCLGELERGEM 397
           S+    +   G+++K+L TIPI++Y+ ++   FR+DQ+ECV+CLGELE GEM
Sbjct: 60  SSQTLHQFAKGIEEKVLLTIPILAYSAKDCKLFRVDQSECVICLGELEDGEM 111


>gb|EMJ03988.1| hypothetical protein PRUPE_ppa013731mg [Prunus persica]
          Length = 106

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
 Frame = +2

Query: 239 LSALVEDRPP----TGVDQKILETIPIISYATEEGHSFRLDQTECVVCLGELERGEM 397
           L A +  +PP     GVD+K+L +IPI+SY+T+    F++DQ+ECV+CLGELE G+M
Sbjct: 3   LQASLSQQPPISQSNGVDEKVLSSIPILSYSTKNCELFQVDQSECVICLGELEDGDM 59


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