BLASTX nr result

ID: Rauwolfia21_contig00052343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00052343
         (231 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878529.1| plant synaptotagmin [Arabidopsis lyrata subs...    55   4e-06
ref|XP_006404543.1| hypothetical protein EUTSA_v10000116mg [Eutr...    54   5e-06
ref|XP_006295681.1| hypothetical protein CARUB_v10024798mg [Caps...    54   5e-06
ref|NP_565495.1| synaptotagmin A [Arabidopsis thaliana] gi|75313...    56   6e-06
ref|NP_001189566.1| synaptotagmin A [Arabidopsis thaliana] gi|33...    56   6e-06
ref|NP_001189565.1| synaptotagmin A [Arabidopsis thaliana] gi|33...    56   6e-06

>ref|XP_002878529.1| plant synaptotagmin [Arabidopsis lyrata subsp. lyrata]
           gi|297324368|gb|EFH54788.1| plant synaptotagmin
           [Arabidopsis lyrata subsp. lyrata]
          Length = 533

 Score = 54.7 bits (130), Expect(2) = 4e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -2

Query: 230 EWNEEFTFAVRDPQSQVLDISVYDWEQV 147
           EWNEEF F+VRDPQ+QVL+ +VYDWEQV
Sbjct: 309 EWNEEFKFSVRDPQTQVLEFNVYDWEQV 336



 Score = 21.6 bits (44), Expect(2) = 4e-06
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 31  WNYVGSHDKM 2
           W  VG HDKM
Sbjct: 333 WEQVGKHDKM 342


>ref|XP_006404543.1| hypothetical protein EUTSA_v10000116mg [Eutrema salsugineum]
           gi|557105671|gb|ESQ45996.1| hypothetical protein
           EUTSA_v10000116mg [Eutrema salsugineum]
          Length = 540

 Score = 54.3 bits (129), Expect(2) = 5e-06
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = -2

Query: 230 EWNEEFTFAVRDPQSQVLDISVYDWEQV 147
           EWNEEF F+VRDPQ+Q+L+ +VYDWEQV
Sbjct: 309 EWNEEFKFSVRDPQTQILEFNVYDWEQV 336



 Score = 21.6 bits (44), Expect(2) = 5e-06
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 31  WNYVGSHDKM 2
           W  VG HDKM
Sbjct: 333 WEQVGKHDKM 342


>ref|XP_006295681.1| hypothetical protein CARUB_v10024798mg [Capsella rubella]
           gi|482564389|gb|EOA28579.1| hypothetical protein
           CARUB_v10024798mg [Capsella rubella]
          Length = 540

 Score = 54.3 bits (129), Expect(2) = 5e-06
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = -2

Query: 230 EWNEEFTFAVRDPQSQVLDISVYDWEQV 147
           EWNEEF F+VRDPQ+Q+L+ +VYDWEQV
Sbjct: 309 EWNEEFKFSVRDPQTQILEFNVYDWEQV 336



 Score = 21.6 bits (44), Expect(2) = 5e-06
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 31  WNYVGSHDKM 2
           W  VG HDKM
Sbjct: 333 WEQVGKHDKM 342


>ref|NP_565495.1| synaptotagmin A [Arabidopsis thaliana]
           gi|75313542|sp|Q9SKR2.2|SYT1_ARATH RecName:
           Full=Synaptotagmin-1; AltName: Full=NTMC2T1.1; AltName:
           Full=Synaptotagmin A gi|15027959|gb|AAK76510.1| unknown
           protein [Arabidopsis thaliana]
           gi|20197686|gb|AAM15203.1| expressed protein
           [Arabidopsis thaliana] gi|20197724|gb|AAD29817.2|
           expressed protein [Arabidopsis thaliana]
           gi|21593508|gb|AAM65475.1| unknown [Arabidopsis
           thaliana] gi|28393915|gb|AAO42365.1| unknown protein
           [Arabidopsis thaliana] gi|31071599|dbj|BAC76812.1|
           synaptotagmin A [Arabidopsis thaliana]
           gi|39918793|emb|CAE85115.1| synaptotagmin [Arabidopsis
           thaliana] gi|330252015|gb|AEC07109.1| synaptotagmin A
           [Arabidopsis thaliana]
          Length = 541

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -2

Query: 230 EWNEEFTFAVRDPQSQVLDISVYDWEQV 147
           EWNEEF F+VRDPQ+QVL+ SVYDWEQV
Sbjct: 309 EWNEEFKFSVRDPQTQVLEFSVYDWEQV 336


>ref|NP_001189566.1| synaptotagmin A [Arabidopsis thaliana] gi|330252017|gb|AEC07111.1|
           synaptotagmin A [Arabidopsis thaliana]
          Length = 579

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -2

Query: 230 EWNEEFTFAVRDPQSQVLDISVYDWEQV 147
           EWNEEF F+VRDPQ+QVL+ SVYDWEQV
Sbjct: 347 EWNEEFKFSVRDPQTQVLEFSVYDWEQV 374


>ref|NP_001189565.1| synaptotagmin A [Arabidopsis thaliana] gi|330252016|gb|AEC07110.1|
           synaptotagmin A [Arabidopsis thaliana]
          Length = 565

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -2

Query: 230 EWNEEFTFAVRDPQSQVLDISVYDWEQV 147
           EWNEEF F+VRDPQ+QVL+ SVYDWEQV
Sbjct: 309 EWNEEFKFSVRDPQTQVLEFSVYDWEQV 336


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