BLASTX nr result

ID: Rauwolfia21_contig00052193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00052193
         (545 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315512.1| hypothetical protein POPTR_0010s01590g [Popu...    59   1e-06
gb|ABK93850.1| unknown [Populus trichocarpa]                           58   1e-06

>ref|XP_002315512.1| hypothetical protein POPTR_0010s01590g [Populus trichocarpa]
           gi|222864552|gb|EEF01683.1| hypothetical protein
           POPTR_0010s01590g [Populus trichocarpa]
          Length = 107

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 49/116 (42%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
 Frame = -2

Query: 379 MVRSLSTAKLFSSLLN--------RRGIAAAAEASRSGVSATFGKNGHGGSRDEVDRIHG 224
           M RSL  AKL  + L         RRG AAAA  S + V+A+FG+   GGSR        
Sbjct: 1   MARSLPNAKLLVASLADGLSLSVFRRGYAAAAPIS-AAVTASFGR---GGSRTSAMT--- 53

Query: 223 GKAEDTAHEEPPGAGILSPWVPDPVTGYYRPCHAGVASDTNNAAQEMVLNHKS*PK 56
           GK ED A  +       S W PDPVTGYYRP +  VA       +EMVL+H+  P+
Sbjct: 54  GKMEDGAVAKEDSEAY-SAWAPDPVTGYYRPANY-VAEIDPAELREMVLSHRVRPQ 107


>gb|ABK93850.1| unknown [Populus trichocarpa]
          Length = 107

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 48/116 (41%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
 Frame = -2

Query: 379 MVRSLSTAKLFSSLLN--------RRGIAAAAEASRSGVSATFGKNGHGGSRDEVDRIHG 224
           M RSL  AKL  + L         RRG AAAA  S + V+A+FG+   GGSR        
Sbjct: 1   MARSLPNAKLLVASLADGLSLSVFRRGYAAAAPIS-AAVTASFGR---GGSRTSAMT--- 53

Query: 223 GKAEDTAHEEPPGAGILSPWVPDPVTGYYRPCHAGVASDTNNAAQEMVLNHKS*PK 56
           GK ED A  +       S W PDPVTGYYRP +     D     +EMVL+H+  P+
Sbjct: 54  GKMEDGAVAKEDSEAY-SAWAPDPVTGYYRPANYEAEIDPAE-LREMVLSHRVRPQ 107


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