BLASTX nr result

ID: Rauwolfia21_contig00052148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00052148
         (248 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330602.1| predicted protein [Populus trichocarpa] gi|5...    56   5e-09
ref|XP_006353011.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c...    55   1e-05
ref|XP_004233163.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c...    55   1e-05
ref|XP_003633043.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c...    55   1e-05
ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago trun...    55   1e-05
ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c...    55   1e-05
emb|CAN63633.1| hypothetical protein VITISV_009387 [Vitis vinifera]    55   1e-05

>ref|XP_002330602.1| predicted protein [Populus trichocarpa]
           gi|566195883|ref|XP_006377959.1| acyl-activating enzyme
           14 family protein [Populus trichocarpa]
           gi|550328564|gb|ERP55756.1| acyl-activating enzyme 14
           family protein [Populus trichocarpa]
          Length = 590

 Score = 56.2 bits (134), Expect(2) = 5e-09
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = -1

Query: 248 PKGVTISHSALVVQSLAKLALVGYSEDDVCLSWEHLFLKLSHKRWL 111
           PKGV +SHSA++VQSLAK+A VGYSEDD  + W  + L   +  WL
Sbjct: 186 PKGVIVSHSAMIVQSLAKVAAVGYSEDDFLIIWRIVALVARNDCWL 231



 Score = 29.6 bits (65), Expect(2) = 5e-09
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -2

Query: 58  CILSSIVLAVVQVYLHTAP 2
           C L S+ L ++QVYLHTAP
Sbjct: 229 CWLDSLFLGLLQVYLHTAP 247


>ref|XP_006353011.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
           chloroplastic/peroxisomal-like isoform X1 [Solanum
           tuberosum]
          Length = 560

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -1

Query: 248 PKGVTISHSALVVQSLAKLALVGYSEDDVCL 156
           PKGVT+SHSALVVQSLAK+A+VGY EDDV L
Sbjct: 185 PKGVTLSHSALVVQSLAKIAIVGYGEDDVYL 215


>ref|XP_004233163.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
           chloroplastic/peroxisomal-like [Solanum lycopersicum]
          Length = 560

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -1

Query: 248 PKGVTISHSALVVQSLAKLALVGYSEDDVCL 156
           PKGVT+SHSALVVQSLAK+A+VGY EDDV L
Sbjct: 185 PKGVTLSHSALVVQSLAKIAIVGYGEDDVYL 215


>ref|XP_003633043.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
           chloroplastic/peroxisomal isoform 2 [Vitis vinifera]
          Length = 545

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -1

Query: 248 PKGVTISHSALVVQSLAKLALVGYSEDDVCL 156
           PKGVTISHSAL++QSLAK+A+VGY EDDV L
Sbjct: 184 PKGVTISHSALIIQSLAKIAIVGYDEDDVYL 214


>ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
           gi|355483578|gb|AES64781.1| 2-succinylbenzoate-CoA
           ligase [Medicago truncatula]
          Length = 562

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -1

Query: 248 PKGVTISHSALVVQSLAKLALVGYSEDDVCL 156
           PKGVTISH AL++QSLAK+A+VGYSEDDV L
Sbjct: 181 PKGVTISHEALIIQSLAKIAIVGYSEDDVYL 211


>ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
           chloroplastic/peroxisomal isoform 1 [Vitis vinifera]
           gi|297740839|emb|CBI31021.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -1

Query: 248 PKGVTISHSALVVQSLAKLALVGYSEDDVCL 156
           PKGVTISHSAL++QSLAK+A+VGY EDDV L
Sbjct: 187 PKGVTISHSALIIQSLAKIAIVGYDEDDVYL 217


>emb|CAN63633.1| hypothetical protein VITISV_009387 [Vitis vinifera]
          Length = 520

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -1

Query: 248 PKGVTISHSALVVQSLAKLALVGYSEDDVCL 156
           PKGVTISHSAL++QSLAK+A+VGY EDDV L
Sbjct: 184 PKGVTISHSALIIQSLAKIAIVGYDEDDVYL 214


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