BLASTX nr result

ID: Rauwolfia21_contig00052046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00052046
         (221 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ13413.1| hypothetical protein PRUPE_ppa013107mg [Prunus pe...   110   1e-22
ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide...   105   8e-21
ref|XP_004294212.1| PREDICTED: photosystem II 10 kDa polypeptide...   104   1e-20
gb|AHA84133.1| chloroplast photosystem II 10 kDa protein [Phaseo...   102   4e-20
gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK4407...   100   2e-19
gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]...   100   2e-19
ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Popu...    99   4e-19
gb|ABI14811.1| chloroplast photosystem II light-inducible protei...    98   1e-18
ref|XP_002317015.1| Photosystem II 10 kDa polypeptide family pro...    97   2e-18
gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]    97   2e-18
ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycin...    96   5e-18
gb|AAF78511.1|AF195209_1 polypeptide precursor of photosystem II...    95   1e-17
gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like pr...    94   1e-17
gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like pr...    94   1e-17
gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]       93   3e-17
gb|ADB93062.1| chloroplast photosystem II 10 kDa polypeptide [Ja...    93   4e-17
gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]    92   5e-17
ref|XP_004488847.1| PREDICTED: photosystem II 10 kDa polypeptide...    92   7e-17
gb|ADY38661.1| putative chloroplast photosystem II protein PsbR ...    92   7e-17
gb|ABQ53998.1| 10 kDa photosystem II polypeptide [Cicer arietinum]     92   7e-17

>gb|EMJ13413.1| hypothetical protein PRUPE_ppa013107mg [Prunus persica]
          Length = 139

 Score =  110 bits (276), Expect = 1e-22
 Identities = 54/66 (81%), Positives = 61/66 (92%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA +VM+S+SLKPSPFTVE SAV+GLPSLAR+SS  +VQASGGKKIKTDTPYGTGGGMNL
Sbjct: 1   MAASVMASVSLKPSPFTVEKSAVRGLPSLARTSSSFKVQASGGKKIKTDTPYGTGGGMNL 60

Query: 204 RDGLDA 221
           +DG DA
Sbjct: 61  KDGKDA 66


>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
           vinifera] gi|147789486|emb|CAN71762.1| hypothetical
           protein VITISV_021149 [Vitis vinifera]
           gi|296082806|emb|CBI21811.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  105 bits (261), Expect = 8e-21
 Identities = 53/66 (80%), Positives = 57/66 (86%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA +VMSSLSLKPSPF+VE  AV+GLPSLARSSS  RV+ASGGKKIKTD PYG GGGM L
Sbjct: 1   MAASVMSSLSLKPSPFSVERRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMKL 60

Query: 204 RDGLDA 221
            DGLDA
Sbjct: 61  SDGLDA 66


>ref|XP_004294212.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 139

 Score =  104 bits (259), Expect = 1e-20
 Identities = 50/66 (75%), Positives = 60/66 (90%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA +VM+S+SLKP+PF+ E SAV+GLPSLAR+S+  +VQASGGKKIKT TPYGTGGGMNL
Sbjct: 1   MAASVMASVSLKPAPFSFEKSAVRGLPSLARTSASFKVQASGGKKIKTATPYGTGGGMNL 60

Query: 204 RDGLDA 221
           RDG+DA
Sbjct: 61  RDGVDA 66


>gb|AHA84133.1| chloroplast photosystem II 10 kDa protein [Phaseolus vulgaris]
           gi|561022523|gb|ESW21253.1| hypothetical protein
           PHAVU_005G055200g [Phaseolus vulgaris]
          Length = 139

 Score =  102 bits (255), Expect = 4e-20
 Identities = 49/66 (74%), Positives = 60/66 (90%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA++VM+S++LKP+PFTVE S+V+GLPSL+R+SS  RV ASGGKKIKTDTPYG  GGMNL
Sbjct: 1   MASSVMASVALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGGKKIKTDTPYGISGGMNL 60

Query: 204 RDGLDA 221
           RDG+DA
Sbjct: 61  RDGVDA 66


>gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK44073.1| unknown
           [Lotus japonicus]
          Length = 139

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/66 (72%), Positives = 61/66 (92%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA++VM+S+SLKP+ F++E S+V+GLPSL+RSS+  RV ASGGKKIKTDTPYGTGGGMNL
Sbjct: 1   MASSVMASVSLKPAGFSLEKSSVRGLPSLSRSSASFRVVASGGKKIKTDTPYGTGGGMNL 60

Query: 204 RDGLDA 221
           R+G+DA
Sbjct: 61  RNGVDA 66


>gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489823|gb|ABK96711.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 137

 Score =  100 bits (249), Expect = 2e-19
 Identities = 50/66 (75%), Positives = 59/66 (89%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA +VM+SLSLKPSPFTVE S+V+GLP+L+R S   +++ASG KKIKTDTPYGTGGGMNL
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRS--FKIEASGVKKIKTDTPYGTGGGMNL 58

Query: 204 RDGLDA 221
           RDGLDA
Sbjct: 59  RDGLDA 64


>ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
           gi|566154457|ref|XP_006370466.1| Photosystem II 10 kDa
           polypeptide family protein [Populus trichocarpa]
           gi|118487848|gb|ABK95747.1| unknown [Populus
           trichocarpa] gi|550349659|gb|ERP67035.1| Photosystem II
           10 kDa polypeptide family protein [Populus trichocarpa]
          Length = 137

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 49/66 (74%), Positives = 59/66 (89%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA +VM+SLSLKPSPFTVE S+V+GLP+L+R +   +++ASG KKIKTDTPYGTGGGMNL
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRT--FKIEASGVKKIKTDTPYGTGGGMNL 58

Query: 204 RDGLDA 221
           RDGLDA
Sbjct: 59  RDGLDA 64


>gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
           terminalis]
          Length = 138

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 52/66 (78%), Positives = 57/66 (86%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MAT+VMSSLSLK SPF +E SA +GLPSLAR SS  RV+ASG KKIKTD PYGTGGGM+L
Sbjct: 1   MATSVMSSLSLKASPF-LEKSAARGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMSL 59

Query: 204 RDGLDA 221
           RDGLDA
Sbjct: 60  RDGLDA 65


>ref|XP_002317015.1| Photosystem II 10 kDa polypeptide family protein [Populus
           trichocarpa] gi|566195489|ref|XP_006377857.1|
           hypothetical protein POPTR_0011s14540g [Populus
           trichocarpa] gi|118488264|gb|ABK95951.1| unknown
           [Populus trichocarpa] gi|222860080|gb|EEE97627.1|
           Photosystem II 10 kDa polypeptide family protein
           [Populus trichocarpa] gi|550328393|gb|ERP55654.1|
           hypothetical protein POPTR_0011s14540g [Populus
           trichocarpa]
          Length = 137

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 48/66 (72%), Positives = 59/66 (89%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA +VM+SL+LKPSPFTVE S+V+GLP+L+R S   +++ASG KKIKTDTPYGTGGGMNL
Sbjct: 1   MAASVMASLNLKPSPFTVEKSSVRGLPTLSRRS--FKIEASGVKKIKTDTPYGTGGGMNL 58

Query: 204 RDGLDA 221
           R+GLDA
Sbjct: 59  RNGLDA 64


>gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]
          Length = 139

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 47/66 (71%), Positives = 58/66 (87%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA++VM+S+SLKP+PFTVE SAV+GLPSL+RSSS  +V ASGGKKIKTD PYG  GGMNL
Sbjct: 1   MASSVMASVSLKPAPFTVEKSAVRGLPSLSRSSSSFKVVASGGKKIKTDKPYGINGGMNL 60

Query: 204 RDGLDA 221
            +G+D+
Sbjct: 61  VEGVDS 66


>ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycine max]
           gi|255626243|gb|ACU13466.1| unknown [Glycine max]
          Length = 139

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 46/66 (69%), Positives = 58/66 (87%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA++VM+S++LKP+PFTVE S+V+GLPSL+R+SS  RV ASGGKKIKTD PYG  GGM L
Sbjct: 1   MASSVMASVALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGGKKIKTDKPYGINGGMAL 60

Query: 204 RDGLDA 221
           R+G+DA
Sbjct: 61  REGVDA 66


>gb|AAF78511.1|AF195209_1 polypeptide precursor of photosystem II [Pyrus pyrifolia]
          Length = 82

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 48/67 (71%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
 Frame = +3

Query: 24  MATTVM-SSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMN 200
           MA +VM SS+SLKPSPFTV+  AV+GLPSL+RSS+  +VQASGGKKI+T TPYG  GGM+
Sbjct: 1   MAASVMTSSVSLKPSPFTVDKPAVRGLPSLSRSSASFKVQASGGKKIRTATPYGINGGMD 60

Query: 201 LRDGLDA 221
           LRDG+DA
Sbjct: 61  LRDGVDA 67


>gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
           arrhiza] gi|339716046|gb|AEJ88270.1| putative
           chloroplast photosystem II 10 kDa protein [Wolffia
           arrhiza]
          Length = 138

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 48/66 (72%), Positives = 56/66 (84%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           M ++V+SSLSLKPSP +   S VKGLPSLAR +S L V+ASGGKKIKTDTP+GTGGGM L
Sbjct: 1   MTSSVISSLSLKPSPISAR-SPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMKL 59

Query: 204 RDGLDA 221
           +DGLDA
Sbjct: 60  KDGLDA 65


>gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
           arrhiza] gi|351066200|gb|AEQ39074.1| putative
           chloroplast photosystem II 10 kDa protein [Wolffia
           arrhiza]
          Length = 138

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 48/66 (72%), Positives = 56/66 (84%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           M ++V+SSLSLKPSP +   S VKGLPSLAR +S L V+ASGGKKIKTDTP+GTGGGM L
Sbjct: 1   MVSSVISSLSLKPSPISAR-SPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMKL 59

Query: 204 RDGLDA 221
           +DGLDA
Sbjct: 60  KDGLDA 65


>gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 136

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 48/66 (72%), Positives = 58/66 (87%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA +VM+SLSLKPSPFTVE S+V+GLP+L+R +   +++ASG  KIKTDTPYGTGGGMNL
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRT--FKIEASG-VKIKTDTPYGTGGGMNL 57

Query: 204 RDGLDA 221
           RDGLDA
Sbjct: 58  RDGLDA 63


>gb|ADB93062.1| chloroplast photosystem II 10 kDa polypeptide [Jatropha curcas]
          Length = 137

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/66 (68%), Positives = 57/66 (86%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MAT+VM+S+SLKPSPF+V+ S+V+GLP L+R +   +V+A GGKKIKTD PYG GGGMNL
Sbjct: 1   MATSVMASVSLKPSPFSVQKSSVRGLPKLSRRA--FKVEAGGGKKIKTDKPYGIGGGMNL 58

Query: 204 RDGLDA 221
           R+GLDA
Sbjct: 59  RNGLDA 64


>gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
          Length = 138

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 48/66 (72%), Positives = 56/66 (84%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA++V+SSLSLKPSP +   S VKGLPSLAR +S L V+ASGGKKIKTDTP+G GGGM L
Sbjct: 1   MASSVISSLSLKPSPISAR-SPVKGLPSLARPASGLTVKASGGKKIKTDTPFGIGGGMKL 59

Query: 204 RDGLDA 221
           +DGLDA
Sbjct: 60  KDGLDA 65


>ref|XP_004488847.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
           [Cicer arietinum]
          Length = 136

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 47/66 (71%), Positives = 57/66 (86%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA++VM+SLSLKP+PFT+E S+VKGLPS++R     RV ASG KKIKTDTPYGTGGGM+L
Sbjct: 1   MASSVMASLSLKPTPFTIEKSSVKGLPSISRP---FRVVASGIKKIKTDTPYGTGGGMDL 57

Query: 204 RDGLDA 221
            +GLDA
Sbjct: 58  PNGLDA 63


>gb|ADY38661.1| putative chloroplast photosystem II protein PsbR [Wolffia arrhiza]
          Length = 79

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           M ++V+SSLSLKPSP +   S VKGLPSLAR +S L V+ASGGKKIKTDTP+GTGGG  L
Sbjct: 1   MVSSVISSLSLKPSPISAR-SPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGTEL 59

Query: 204 RDGLDA 221
           +DGLDA
Sbjct: 60  KDGLDA 65


>gb|ABQ53998.1| 10 kDa photosystem II polypeptide [Cicer arietinum]
          Length = 106

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 47/66 (71%), Positives = 57/66 (86%)
 Frame = +3

Query: 24  MATTVMSSLSLKPSPFTVETSAVKGLPSLARSSSVLRVQASGGKKIKTDTPYGTGGGMNL 203
           MA++VM+SLSLKP+PFT+E S+VKGLPS++R     RV ASG KKIKTDTPYGTGGGM+L
Sbjct: 1   MASSVMASLSLKPTPFTIEKSSVKGLPSISRP---FRVVASGIKKIKTDTPYGTGGGMDL 57

Query: 204 RDGLDA 221
            +GLDA
Sbjct: 58  PNGLDA 63


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