BLASTX nr result

ID: Rauwolfia21_contig00052043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00052043
         (306 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001274704.1| aquaporin NIP1-1-like [Solanum lycopersicum]...    39   2e-06
ref|XP_006405830.1| hypothetical protein EUTSA_v10027876mg [Eutr...    42   4e-06
ref|XP_006303503.1| hypothetical protein CARUB_v10010843mg [Caps...    39   8e-06
ref|XP_002890955.1| predicted protein [Arabidopsis lyrata subsp....    39   8e-06

>ref|NP_001274704.1| aquaporin NIP1-1-like [Solanum lycopersicum]
           gi|560891767|dbj|BAO18642.1| nodulin26-like intrinsic
           protein 1;2 [Solanum lycopersicum]
          Length = 290

 Score = 38.5 bits (88), Expect(2) = 2e-06
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +3

Query: 171 PISGASMNPATSLGPAIVTGIY 236
           PISGASMNPA SLGPAIV+  Y
Sbjct: 217 PISGASMNPARSLGPAIVSSHY 238



 Score = 38.5 bits (88), Expect(2) = 2e-06
 Identities = 15/30 (50%), Positives = 23/30 (76%)
 Frame = +2

Query: 215 SNCYRDIWICIMGPIAGAISGCRVVNILRF 304
           S+ Y+ +W+ ++GPI GAI+G  V NI+RF
Sbjct: 235 SSHYKGLWVYMLGPIGGAIAGAWVYNIIRF 264


>ref|XP_006405830.1| hypothetical protein EUTSA_v10027876mg [Eutrema salsugineum]
           gi|557106968|gb|ESQ47283.1| hypothetical protein
           EUTSA_v10027876mg [Eutrema salsugineum]
          Length = 283

 Score = 42.4 bits (98), Expect(2) = 4e-06
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +3

Query: 171 PISGASMNPATSLGPAIVTGIY 236
           PISGASMNPA SLGPAIV G+Y
Sbjct: 207 PISGASMNPARSLGPAIVMGVY 228



 Score = 33.9 bits (76), Expect(2) = 4e-06
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 224 YRDIWICIMGPIAGAISGCRVVNILRF 304
           Y+ IWI I+GP+ G ++G  V N++RF
Sbjct: 228 YKGIWIYIVGPLVGIMAGGFVYNLIRF 254


>ref|XP_006303503.1| hypothetical protein CARUB_v10010843mg [Capsella rubella]
           gi|482572214|gb|EOA36401.1| hypothetical protein
           CARUB_v10010843mg [Capsella rubella]
          Length = 325

 Score = 39.3 bits (90), Expect(2) = 8e-06
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 171 PISGASMNPATSLGPAIVTGIY 236
           PISGASMNPA SLGPA++ G Y
Sbjct: 214 PISGASMNPARSLGPALIWGCY 235



 Score = 35.8 bits (81), Expect(2) = 8e-06
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +2

Query: 221 CYRDIWICIMGPIAGAISGCRVVNILR 301
           CY+D+W+ I+ P+ GA+SG    ++LR
Sbjct: 234 CYKDLWLYIVSPVIGALSGAWTYDLLR 260


>ref|XP_002890955.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336797|gb|EFH67214.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 269

 Score = 39.3 bits (90), Expect(2) = 8e-06
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 171 PISGASMNPATSLGPAIVTGIY 236
           PISGASMNPA SLGPA++ G Y
Sbjct: 160 PISGASMNPARSLGPALIWGCY 181



 Score = 35.8 bits (81), Expect(2) = 8e-06
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +2

Query: 221 CYRDIWICIMGPIAGAISGCRVVNILR 301
           CY+D+W+ I+ P+ GA+SG    ++LR
Sbjct: 180 CYKDLWLYIISPVLGALSGAWTYDLLR 206


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