BLASTX nr result
ID: Rauwolfia21_contig00051728
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00051728
(247 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529510.1| pentatricopeptide repeat-containing protein,... 92 9e-17
ref|XP_006340743.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
gb|EOY31969.1| Pentatricopeptide repeat (PPR) superfamily protei... 87 2e-15
emb|CBI29825.3| unnamed protein product [Vitis vinifera] 87 2e-15
ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_004233739.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
gb|EMJ14826.1| hypothetical protein PRUPE_ppa002066mg [Prunus pe... 80 4e-13
ref|XP_004295543.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 72 6e-11
ref|XP_006301385.1| hypothetical protein CARUB_v10021797mg [Caps... 72 1e-10
ref|NP_178072.1| pentatricopeptide repeat-containing protein [Ar... 71 1e-10
ref|XP_002889252.1| pentatricopeptide repeat-containing protein ... 71 2e-10
ref|XP_006848380.1| hypothetical protein AMTR_s00013p00202120 [A... 69 5e-10
ref|XP_006389878.1| hypothetical protein EUTSA_v10018150mg [Eutr... 69 8e-10
ref|XP_006492928.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_006421323.1| hypothetical protein CICLE_v10004347mg [Citr... 68 1e-09
ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
gb|ESW09607.1| hypothetical protein PHAVU_009G141200g [Phaseolus... 61 2e-07
ref|XP_002308024.2| pentatricopeptide repeat-containing family p... 59 7e-07
>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 804
Score = 91.7 bits (226), Expect = 9e-17
Identities = 43/82 (52%), Positives = 59/82 (71%)
Frame = -2
Query: 246 SWVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKK 67
SWVSHN+IIDMLI+ + GF+LYW++L E ++CG IS+DAF VLI AY ++
Sbjct: 90 SWVSHNMIIDMLIKDN--------GFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDM 141
Query: 66 AEKSVETFGRMREFGCKPGLFT 1
EK+VE+F M++F CKP +FT
Sbjct: 142 IEKAVESFEMMKDFDCKPDVFT 163
>ref|XP_006340743.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Solanum tuberosum]
Length = 775
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = -2
Query: 246 SWVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKK 67
SWV NLI DML + GFDLYW +LD+ + G I+S+AFA LI YW++ K
Sbjct: 84 SWVPKNLIADMLAQDG--------GFDLYWNVLDKLKFSGIPIASNAFAALIWGYWKVNK 135
Query: 66 AEKSVETFGRMREFGCKPGLFT 1
AEK+VE FGRM++F CKP ++T
Sbjct: 136 AEKAVEAFGRMKDFDCKPNIYT 157
>gb|EOY31969.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 800
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = -2
Query: 246 SWVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKK 67
S S L++DML+R D +GFD+YW+ L+E +KCG LI SDAF VLIS Y +L
Sbjct: 95 SSASDKLVVDMLLRKD-------NGFDMYWQTLEEIKKCGALIVSDAFKVLISGYSKLGL 147
Query: 66 AEKSVETFGRMREFGCKPGLFT 1
EK+VE FG+M++F CKP +FT
Sbjct: 148 DEKAVECFGKMKDFDCKPDVFT 169
>emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/82 (51%), Positives = 56/82 (68%)
Frame = -2
Query: 246 SWVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKK 67
SWV+HNL+IDML + D GFD YWKIL+E + I F+VLI+AY +
Sbjct: 95 SWVTHNLVIDMLAKDD--------GFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGM 146
Query: 66 AEKSVETFGRMREFGCKPGLFT 1
AEK+VE+FG+M++FGCKP +FT
Sbjct: 147 AEKAVESFGKMKDFGCKPDVFT 168
>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/82 (51%), Positives = 56/82 (68%)
Frame = -2
Query: 246 SWVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKK 67
SWV+HNL+IDML + D GFD YWKIL+E + I F+VLI+AY +
Sbjct: 95 SWVTHNLVIDMLAKDD--------GFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGM 146
Query: 66 AEKSVETFGRMREFGCKPGLFT 1
AEK+VE+FG+M++FGCKP +FT
Sbjct: 147 AEKAVESFGKMKDFGCKPDVFT 168
>ref|XP_004233739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Solanum lycopersicum]
Length = 753
Score = 83.2 bits (204), Expect = 3e-14
Identities = 38/81 (46%), Positives = 53/81 (65%)
Frame = -2
Query: 243 WVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKKA 64
W+ NLI DML + GFDLYW +LD+ + G I+S+AFA LI YW++ KA
Sbjct: 63 WIPKNLIADMLSKDG--------GFDLYWNVLDKLKFSGIPIASNAFAALIWGYWKVNKA 114
Query: 63 EKSVETFGRMREFGCKPGLFT 1
EK++E F RM++F CKP ++T
Sbjct: 115 EKAIEAFSRMKDFDCKPNIYT 135
>gb|EMJ14826.1| hypothetical protein PRUPE_ppa002066mg [Prunus persica]
Length = 722
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/74 (52%), Positives = 50/74 (67%)
Frame = -2
Query: 225 IIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKKAEKSVET 46
+IDML+R D F+LYW+ L++ R CG I S AFAVLI+ Y +L AEK+VET
Sbjct: 65 VIDMLVRDD--------AFELYWRTLEQLRDCGLPIGSAAFAVLINGYAKLDMAEKAVET 116
Query: 45 FGRMREFGCKPGLF 4
FGRM++F CKP F
Sbjct: 117 FGRMKDFNCKPNAF 130
>ref|XP_004295543.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g79540-like [Fragaria vesca subsp. vesca]
Length = 768
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = -2
Query: 234 HNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKKAEKS 55
H+ I+DML++ D FD+YW + E R CG I AF+VLI Y RL AEK+
Sbjct: 81 HSAIVDMLVKDD-------KRFDIYWSTMQELRDCGVGIGCGAFSVLIRGYERLGNAEKA 133
Query: 54 VETFGRMREFGCKPGLFT 1
VE F +M EF CKP ++T
Sbjct: 134 VEAFVKMEEFDCKPDVYT 151
>ref|XP_006301385.1| hypothetical protein CARUB_v10021797mg [Capsella rubella]
gi|482570095|gb|EOA34283.1| hypothetical protein
CARUB_v10021797mg [Capsella rubella]
Length = 780
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/79 (46%), Positives = 51/79 (64%)
Frame = -2
Query: 237 SHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKKAEK 58
S L+I+ML + D G DLYW+ L+E + G + S F VLISAY ++ AEK
Sbjct: 94 SFGLVINMLSQDD--------GCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEK 145
Query: 57 SVETFGRMREFGCKPGLFT 1
+VE+FGRM+EF C+P +FT
Sbjct: 146 AVESFGRMKEFDCRPDVFT 164
>ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g79540 gi|4835755|gb|AAD30222.1|AC007202_4 Contains
similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = -2
Query: 237 SHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKKAEK 58
S L+IDML + G DLYW+ L+E + G + S F VLISAY ++ AEK
Sbjct: 94 SFGLVIDMLSEDN--------GCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEK 145
Query: 57 SVETFGRMREFGCKPGLFT 1
+VE+FGRM+EF C+P +FT
Sbjct: 146 AVESFGRMKEFDCRPDVFT 164
>ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335093|gb|EFH65511.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 780
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = -2
Query: 237 SHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKKAEK 58
S L+IDML + G DLYW+ L+E + G + S F VLISAY ++ AEK
Sbjct: 94 SFGLVIDMLSEDN--------GCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEK 145
Query: 57 SVETFGRMREFGCKPGLFT 1
+VE+FGRM+EF C+P +FT
Sbjct: 146 AVESFGRMKEFDCRPDVFT 164
>ref|XP_006848380.1| hypothetical protein AMTR_s00013p00202120 [Amborella trichopoda]
gi|548851686|gb|ERN09961.1| hypothetical protein
AMTR_s00013p00202120 [Amborella trichopoda]
Length = 789
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = -2
Query: 246 SWVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKK 67
SW SHN +ID L +G D F+ WK+L+E + + IS +AFAV+ISAY +L
Sbjct: 91 SWDSHNSMIDKL-QGMQD-------FESAWKLLEELKISKHPISPEAFAVMISAYTKLGM 142
Query: 66 AEKSVETFGRMREFGCKPGLFT 1
AEK+VE F +M EF C+P FT
Sbjct: 143 AEKAVECFSKMVEFNCRPNTFT 164
>ref|XP_006389878.1| hypothetical protein EUTSA_v10018150mg [Eutrema salsugineum]
gi|557086312|gb|ESQ27164.1| hypothetical protein
EUTSA_v10018150mg [Eutrema salsugineum]
Length = 781
Score = 68.6 bits (166), Expect = 8e-10
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = -2
Query: 177 HGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKKAEKSVETFGRMREFGCKPGLFT 1
+G DLYW+ L+E + G + S F VLISAY ++ AEK+VE+FGRM+EF C+P +FT
Sbjct: 108 NGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFT 166
>ref|XP_006492928.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Citrus sinensis]
Length = 869
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/81 (39%), Positives = 53/81 (65%)
Frame = -2
Query: 246 SWVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKK 67
S+ S++ +I ML++ + GFDLYW+ LDE + + SD F VLIS Y+++
Sbjct: 164 SFASNSAVIRMLLKPN--------GFDLYWQTLDELKSGNVSVVSDVFFVLISGYYKVGD 215
Query: 66 AEKSVETFGRMREFGCKPGLF 4
EK++E+FG+M+EF C+P ++
Sbjct: 216 CEKALESFGKMKEFDCQPDVY 236
>ref|XP_006421323.1| hypothetical protein CICLE_v10004347mg [Citrus clementina]
gi|557523196|gb|ESR34563.1| hypothetical protein
CICLE_v10004347mg [Citrus clementina]
Length = 801
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/81 (39%), Positives = 53/81 (65%)
Frame = -2
Query: 246 SWVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKK 67
S+ S++ +I ML++ + GFDLYW+ LDE + + SD F VLIS Y+++
Sbjct: 96 SFASNSAVIRMLLKPN--------GFDLYWQTLDELKSGNVSVVSDVFFVLISGYYKVGD 147
Query: 66 AEKSVETFGRMREFGCKPGLF 4
EK++E+FG+M+EF C+P ++
Sbjct: 148 CEKALESFGKMKEFDCQPDVY 168
>ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/81 (45%), Positives = 46/81 (56%)
Frame = -2
Query: 246 SWVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKK 67
SW + LI G N F+LYWK+L E + ISS+AF+VLI AY
Sbjct: 87 SWHLRCRTVQDLIIGKLIKENA---FELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGM 143
Query: 66 AEKSVETFGRMREFGCKPGLF 4
EK+VE+FG MR+F CKP LF
Sbjct: 144 DEKAVESFGLMRDFDCKPDLF 164
>ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/81 (44%), Positives = 45/81 (55%)
Frame = -2
Query: 246 SWVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKK 67
SW + LI G N F+LYWK+L E + ISS+AF+VLI AY
Sbjct: 87 SWHLRCRTVQDLIIGKLIKENA---FELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGM 143
Query: 66 AEKSVETFGRMREFGCKPGLF 4
EK+VE+F MR+F CKP LF
Sbjct: 144 DEKAVESFSLMRDFDCKPDLF 164
>gb|ESW09607.1| hypothetical protein PHAVU_009G141200g [Phaseolus vulgaris]
Length = 719
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = -2
Query: 183 TYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKKAEKSVETFGRMREFGCKP 13
T + F LYW+ L+ +K G ISSD+ VLI AYW++ AEK++E+FGRM E G P
Sbjct: 74 TNNWFSLYWEGLEHIKKSGVFISSDSVYVLIRAYWQVGLAEKAIESFGRMGEVGSVP 130
>ref|XP_002308024.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550335473|gb|EEE91547.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 838
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = -2
Query: 246 SWVSHNLIIDMLIRGDYDSSNTYHGFDLYWKILDEARKCGNLISSDAFAVLISAYWRLKK 67
+W S +LI D+LI +G +LY + L+ + G + +DAF VLI Y ++
Sbjct: 90 AWESCDLITDLLIN--------QNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGL 141
Query: 66 AEKSVETFGRMREFGCKPGLFT 1
+K++ETFG MR+F C P ++T
Sbjct: 142 TDKAMETFGSMRDFDCTPDVYT 163