BLASTX nr result
ID: Rauwolfia21_contig00051407
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00051407
(426 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 77 7e-23
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 75 2e-22
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe... 75 9e-22
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers... 68 5e-21
ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297... 70 1e-20
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 76 2e-20
gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus pe... 77 2e-20
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 65 2e-20
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 65 2e-20
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [... 74 3e-20
gb|EXC04260.1| hypothetical protein L484_002345 [Morus notabilis] 73 3e-20
gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [... 75 3e-20
gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [... 72 4e-20
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam... 74 6e-20
gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus pe... 73 7e-20
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 69 3e-19
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 76 6e-19
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam... 71 8e-19
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 77 1e-18
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 77 1e-18
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 77.4 bits (189), Expect(3) = 7e-23
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +2
Query: 80 QGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
+GG FRNL FNLA LAKQGWR+LQ+P SLV +LK+KYFP+ FLE T S +W+
Sbjct: 495 EGGLGFRNLHAFNLALLAKQGWRLLQNPDSLVTKVLKAKYFPTRSFLETTVSPYASVVWK 554
Score = 42.4 bits (98), Expect(3) = 7e-23
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 9 QFWWEADSHHKRICWRAWEDLCRPKE 86
QFWW + + +K+I W AW+ LC PKE
Sbjct: 469 QFWWNSSTENKKIHWMAWDRLCAPKE 494
Score = 33.1 bits (74), Expect(3) = 7e-23
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 253 MAKGRDLLSHGLHWRVGNGFSIKLRTDPWL*LHNGFCMPSFVQATCCLTKVLDLI 417
+ R ++ G W+VG+G +I + D WL N F + S +TKV DLI
Sbjct: 556 LCDARTVIIQGSRWQVGSGDTIGIWEDRWLPQPNSFQIFSPRPEHSAITKVSDLI 610
>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1164
Score = 74.7 bits (182), Expect(3) = 2e-22
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = +2
Query: 77 SQGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLW 256
++GG FRN+E FN A LAK+GWRI+ S SLV LK+KYFPS FL+A GS SY+W
Sbjct: 809 NEGGLGFRNMELFNQALLAKKGWRIINSLDSLVTRTLKAKYFPSGHFLKAEMGSDASYVW 868
Query: 257 Q 259
+
Sbjct: 869 R 869
Score = 41.2 bits (95), Expect(3) = 2e-22
Identities = 25/56 (44%), Positives = 30/56 (53%)
Frame = +1
Query: 253 MAKGRDLLSHGLHWRVGNGFSIKLRTDPWL*LHNGFCMPSFVQATCCLTKVLDLID 420
+ KGRDLL G+ + VGNG SI + DPW+ F S V KV DLID
Sbjct: 871 LLKGRDLLRKGIRYHVGNGESISVWHDPWILRPCTFKTYSTVMEGLEDLKVADLID 926
Score = 35.4 bits (80), Expect(3) = 2e-22
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPK-EGTL 95
M +FWW ++I W AW+ +C PK EG L
Sbjct: 782 MAEFWWGDSDRGRKIHWVAWDKMCAPKNEGGL 813
>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
Length = 1011
Score = 75.5 bits (184), Expect(3) = 9e-22
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +2
Query: 80 QGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
+GG FRNL FNLA LAKQGWR+LQ+P SL+ +LK+KYFP+ FLE S +W+
Sbjct: 743 EGGLGFRNLHAFNLALLAKQGWRLLQNPDSLITKVLKAKYFPTRSFLETAVSLHASVVWK 802
Score = 42.4 bits (98), Expect(3) = 9e-22
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 9 QFWWEADSHHKRICWRAWEDLCRPKE 86
QFWW + + +K+I W AW+ LC PKE
Sbjct: 717 QFWWNSSTENKKIHWMAWDRLCAPKE 742
Score = 31.2 bits (69), Expect(3) = 9e-22
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 259 KGRDLLSHGLHWRVGNGFSIKLRTDPWL*LHNGFCMPSFVQATCCLTKVLDLI 417
+ R ++ G W+VG+G +I + D WL N F + +TKV DLI
Sbjct: 806 EARTVIIQGSRWQVGSGDTIGIWEDRWLPQPNSFRIFFPKPEHSAITKVSDLI 858
>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 67.8 bits (164), Expect(3) = 5e-21
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +2
Query: 83 GGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
GG FR++ FN A LAKQ WR+LQ P L A ++KS+YFP FL++ GSRPS+ W+
Sbjct: 699 GGLGFRDIGLFNQALLAKQAWRLLQFPDCLFARLIKSRYFPVGEFLDSDVGSRPSFGWR 757
Score = 44.3 bits (103), Expect(3) = 5e-21
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPKE 86
M FWW A+ H ++I W +WE LC PKE
Sbjct: 670 MADFWWSANDHQRKIHWLSWEKLCLPKE 697
Score = 34.3 bits (77), Expect(3) = 5e-21
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 262 GRDLLSHGLHWRVGNGFSIKLRTDPWL 342
GRDLL GL RVGNG SI++ D WL
Sbjct: 762 GRDLLCRGLVKRVGNGKSIRVWIDYWL 788
>ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297422 [Fragaria vesca
subsp. vesca]
Length = 1096
Score = 70.1 bits (170), Expect(3) = 1e-20
Identities = 29/61 (47%), Positives = 45/61 (73%)
Frame = +2
Query: 77 SQGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLW 256
++GG FR++ FN+A LAKQGWR+++ P+SL+A +LK++YFPS F+EA S+ W
Sbjct: 614 AEGGLGFRDMRLFNMALLAKQGWRLIRQPNSLLAQVLKARYFPSESFMEAEVAKGCSFTW 673
Query: 257 Q 259
+
Sbjct: 674 R 674
Score = 41.6 bits (96), Expect(3) = 1e-20
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = +1
Query: 259 KGRDLLSHGLHWRVGNGFSIKLRTDPWL*LHNGFCMPSFVQATCCLTKVLDLID 420
KGRDLL GL ++VGNG SI + DPW+ L F S +V DLID
Sbjct: 678 KGRDLLKKGLRFQVGNGESISVWDDPWIPLPYSFRPYSPPMEGTEELRVCDLID 731
Score = 33.5 bits (75), Expect(3) = 1e-20
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPK-EGTL 95
M +FWW ++I W AWE LC K EG L
Sbjct: 587 MARFWWGDKGDDRKIHWVAWEKLCTTKAEGGL 618
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 76.3 bits (186), Expect(3) = 2e-20
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +2
Query: 80 QGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
+GG FRNL FN+A LAKQ WR++Q+P+SLVA ILK++YF + LEA G PSY+WQ
Sbjct: 1213 EGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVACILKARYFKNCSILEAQIGHSPSYIWQ 1272
Score = 35.0 bits (79), Expect(3) = 2e-20
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 253 MAKGRDLLSHGLHWRVGNGFSIKLRTDPWL 342
+ K R L+ G WR+GNG S+++ D WL
Sbjct: 1274 LCKARVLIEKGSRWRIGNGHSVRIWGDRWL 1303
Score = 33.5 bits (75), Expect(3) = 2e-20
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPKE 86
M ++WW ++I W +W LC PK+
Sbjct: 1185 MARYWWVEQDGQRKIHWLSWNKLCLPKQ 1212
>gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus persica]
Length = 787
Score = 76.6 bits (187), Expect(3) = 2e-20
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +2
Query: 80 QGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
+GG FRNL FN+A LAKQ WR++Q+P+SLVA ILK++YF + LEA G PSY+WQ
Sbjct: 445 EGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVARILKARYFKNCSILEAQIGHSPSYIWQ 504
Score = 35.0 bits (79), Expect(3) = 2e-20
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 253 MAKGRDLLSHGLHWRVGNGFSIKLRTDPWL 342
+ K R L+ G WR+GNG S+++ D WL
Sbjct: 506 LCKARVLIEKGSRWRIGNGHSVRIWGDRWL 535
Score = 33.1 bits (74), Expect(3) = 2e-20
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPKE 86
M +WW ++I W +W LC PK+
Sbjct: 417 MAHYWWGEQDGQRKIHWLSWNKLCLPKQ 444
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 65.5 bits (158), Expect(3) = 2e-20
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +2
Query: 83 GGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
GG FR+++ FN A LAKQ WR+L P L++ +LKS+YF ++ FL+A RPS+ W+
Sbjct: 814 GGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATDFLDAALSQRPSFGWR 872
Score = 41.6 bits (96), Expect(3) = 2e-20
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPKE 86
M FWW++ H ++I W++WE LC PK+
Sbjct: 785 MASFWWDSCDHSRKIHWQSWERLCLPKD 812
Score = 37.4 bits (85), Expect(3) = 2e-20
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +1
Query: 241 SILFMAKGRDLLSHGLHWRVGNGFSIKLRTDPWL*LHNGFCMP 369
SILF GR+LLS GL RVG+G S+ + DPW+ NGF P
Sbjct: 873 SILF---GRELLSKGLQKRVGDGASLFVWIDPWI-DDNGFRAP 911
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 65.5 bits (158), Expect(3) = 2e-20
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +2
Query: 83 GGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
GG FR+++ FN A LAKQ WR+L P L++ +LKS+YF ++ FL+A RPS+ W+
Sbjct: 817 GGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATDFLDAALSQRPSFGWR 875
Score = 41.6 bits (96), Expect(3) = 2e-20
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPKE 86
M FWW++ H ++I W++WE LC PK+
Sbjct: 788 MASFWWDSCDHSRKIHWQSWERLCLPKD 815
Score = 37.4 bits (85), Expect(3) = 2e-20
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +1
Query: 241 SILFMAKGRDLLSHGLHWRVGNGFSIKLRTDPWL*LHNGFCMP 369
SILF GR+LLS GL RVG+G S+ + DPW+ NGF P
Sbjct: 876 SILF---GRELLSKGLQKRVGDGASLFVWIDPWI-DDNGFRAP 914
>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 73.6 bits (179), Expect(3) = 3e-20
Identities = 34/59 (57%), Positives = 44/59 (74%)
Frame = +2
Query: 83 GGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
GG FR+LE FN A LAKQ WRIL++P SLVA I +++Y PS FLEA G+ PS++W+
Sbjct: 554 GGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWR 612
Score = 40.4 bits (93), Expect(3) = 3e-20
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 262 GRDLLSHGLHWRVGNGFSIKLRTDPWL 342
G++LL+ GL WRVG+G SI++ TD WL
Sbjct: 617 GKELLNKGLRWRVGSGVSIQVYTDKWL 643
Score = 30.0 bits (66), Expect(3) = 3e-20
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPK 83
M +FWW + I W WE LC+ K
Sbjct: 525 MARFWWAKAKDKRGIHWVKWELLCKSK 551
>gb|EXC04260.1| hypothetical protein L484_002345 [Morus notabilis]
Length = 1455
Score = 73.2 bits (178), Expect(3) = 3e-20
Identities = 35/58 (60%), Positives = 40/58 (68%)
Frame = +2
Query: 86 GYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
G FR++ FN A LAKQGWRIL PSSLVA I K+KYFP FL+A G PSY W+
Sbjct: 149 GMGFRDVGAFNQALLAKQGWRILSKPSSLVAIIFKAKYFPKGEFLDAYIGHNPSYTWR 206
Score = 37.4 bits (85), Expect(3) = 3e-20
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 9 QFWWEADSHHKRICWRAWEDLCRPK 83
+FWW + K+I W WE LCRPK
Sbjct: 121 RFWWGGNDTEKKIHWAKWELLCRPK 145
Score = 33.1 bits (74), Expect(3) = 3e-20
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 262 GRDLLSHGLHWRVGNGFSIKLRTDPWL 342
GR+LL G+ RVG+G SI+ DPW+
Sbjct: 211 GRELLKSGIRRRVGSGKSIQCFRDPWI 237
>gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
Length = 916
Score = 75.1 bits (183), Expect(3) = 3e-20
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = +2
Query: 80 QGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
+GG FRNL FN+ LAKQ WR++Q+P+SLVA ILK++YF + LEA G PSY+WQ
Sbjct: 663 EGGLGFRNLYAFNMVLLAKQLWRLIQTPNSLVARILKARYFKNCSILEAQIGHSPSYIWQ 722
Score = 35.0 bits (79), Expect(3) = 3e-20
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 253 MAKGRDLLSHGLHWRVGNGFSIKLRTDPWL 342
+ K R L+ G WR+GNG S+++ D WL
Sbjct: 724 LCKARVLIEKGSRWRIGNGHSVRIWGDRWL 753
Score = 33.5 bits (75), Expect(3) = 3e-20
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPKE 86
M ++WW ++I W +W LC PK+
Sbjct: 635 MARYWWGEQDGQRKIHWLSWNKLCLPKQ 662
>gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
Length = 851
Score = 72.0 bits (175), Expect(3) = 4e-20
Identities = 32/60 (53%), Positives = 45/60 (75%)
Frame = +2
Query: 77 SQGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLW 256
++GG FR+L+ FN + LAKQ WRIL++P++L A ILK++YFP FL+A KG R S+ W
Sbjct: 408 AEGGMGFRDLQAFNWSLLAKQCWRILRNPTTLWARILKARYFPECSFLDAKKGGRASWAW 467
Score = 38.1 bits (87), Expect(3) = 4e-20
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPK 83
+ +FWW D + +I W +W+ LCRPK
Sbjct: 381 LARFWWGHDGNQGKIHWHSWKKLCRPK 407
Score = 33.1 bits (74), Expect(3) = 4e-20
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 262 GRDLLSHGLHWRVGNGFSIKLRTDPWL 342
GRD++ G W++GNG + + D WL
Sbjct: 473 GRDIIEKGARWQIGNGHLVSVWKDRWL 499
>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 73.9 bits (180), Expect(3) = 6e-20
Identities = 33/60 (55%), Positives = 43/60 (71%)
Frame = +2
Query: 80 QGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
QGG FR L+ FN A LAKQ WR++Q P SLVA + K++YFP + FL+A GS PS+ W+
Sbjct: 99 QGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWR 158
Score = 37.4 bits (85), Expect(3) = 6e-20
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +1
Query: 265 RDLLSHGLHWRVGNGFSIKLRTDPWL*LHNGFCMPSFVQATCCLTKVLDLID 420
R LL+ GL WRVGNG SI ++ D W+ + F + +V DLID
Sbjct: 164 RSLLNAGLRWRVGNGASISVKYDKWVPRPHSFKVILPPSTLSDDARVSDLID 215
Score = 31.6 bits (70), Expect(3) = 6e-20
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 12 FWWEADSHHKRICWRAWEDLCRPK 83
FWW ++I W +W+ LC+ K
Sbjct: 74 FWWXQKEETRKIHWTSWKQLCKSK 97
>gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus persica]
Length = 1072
Score = 73.2 bits (178), Expect(3) = 7e-20
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +2
Query: 83 GGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLW 256
GG FR+LE FN A LAKQ WRIL++P SLVA I +++Y PS FLEA G+ PS++W
Sbjct: 804 GGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIW 861
Score = 39.3 bits (90), Expect(3) = 7e-20
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1
Query: 262 GRDLLSHGLHWRVGNGFSIKLRTDPWL 342
G++LL+ G+ WRVG+G SI++ TD WL
Sbjct: 867 GKELLNKGVRWRVGSGVSIQVYTDKWL 893
Score = 30.0 bits (66), Expect(3) = 7e-20
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPK 83
M +FWW + I W WE LC+ K
Sbjct: 775 MARFWWAKAKDKRGIHWVKWELLCKSK 801
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 68.6 bits (166), Expect(3) = 3e-19
Identities = 34/56 (60%), Positives = 37/56 (66%)
Frame = +2
Query: 83 GGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSY 250
GG FR++E FN A LAKQ WRILQ PS L A KS+YF FLEA G RPSY
Sbjct: 627 GGLGFRDIESFNQALLAKQSWRILQYPSFLFARFFKSRYFDDEEFLEADLGVRPSY 682
Score = 36.2 bits (82), Expect(3) = 3e-19
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPKE 86
M FWW A H ++ W +WE LC KE
Sbjct: 598 MSDFWWNALEHKRKTHWVSWEKLCLAKE 625
Score = 35.4 bits (80), Expect(3) = 3e-19
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +1
Query: 241 SILFMAKGRDLLSHGLHWRVGNGFSIKLRTDPWL 342
SILF GR+LL+ GL VGNG S+ + DPW+
Sbjct: 686 SILF---GRELLAKGLRKEVGNGKSLNVWMDPWI 716
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 76.3 bits (186), Expect(3) = 6e-19
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +2
Query: 80 QGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
QGG+ F++L+ FN A LAKQ WR+LQ SL + + +S+YF +S FL AT+GSRPSY W+
Sbjct: 849 QGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSYAWR 908
Score = 32.3 bits (72), Expect(3) = 6e-19
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 3 MIQFWWEADSHHKRICWRAWEDLCRPKE 86
M+ FWW + ++I W +W+ L PK+
Sbjct: 821 MMDFWWNSMQQKRKIHWLSWQRLTLPKD 848
Score = 30.8 bits (68), Expect(3) = 6e-19
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +1
Query: 241 SILFMAKGRDLLSHGLHWRVGNGFSIKLRTDPWL*LHNG 357
SILF GR+LL GL +GNG + TD W LH+G
Sbjct: 909 SILF---GRELLMQGLRTVIGNGQKTFVWTDKW--LHDG 942
>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 71.2 bits (173), Expect(3) = 8e-19
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +2
Query: 80 QGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
+GG FR L+ FN A LAKQ WR+ Q P SLVA + K++YFP + FL+A GS PS+ W+
Sbjct: 99 RGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWR 158
Score = 36.6 bits (83), Expect(3) = 8e-19
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +1
Query: 265 RDLLSHGLHWRVGNGFSIKLRTDPWL*LHNGFCMPSFVQATCCLTKVLDLID 420
R LL+ GL WRVGNG SI ++ D W+ + F + +V DLID
Sbjct: 164 RRLLNAGLRWRVGNGASISVKYDKWVPRPHSFKVILPPSTLSDDARVSDLID 215
Score = 31.2 bits (69), Expect(3) = 8e-19
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 12 FWWEADSHHKRICWRAWEDLCRPK 83
FWW ++I W +W+ LC+ K
Sbjct: 74 FWWGQKEETRKIHWTSWKQLCKSK 97
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 77.0 bits (188), Expect(3) = 1e-18
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = +2
Query: 80 QGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
+GG FR+L FN A +AKQ WRI+Q+P SLVA ++K KYF S F+EA GS PSY+W+
Sbjct: 464 RGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWR 523
Score = 31.6 bits (70), Expect(3) = 1e-18
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 262 GRDLLSHGLHWRVGNGFSIKLRTDPWL 342
GR+++ GL WR+G+G +K+ WL
Sbjct: 528 GREVIRKGLRWRIGDGKLVKVYQSGWL 554
Score = 30.0 bits (66), Expect(3) = 1e-18
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 12 FWWEADSHHKRICWRAWEDLCRPKE 86
FWW + I W WE LC+ K+
Sbjct: 439 FWWGKKREKRSIHWSKWERLCQAKK 463
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 77.0 bits (188), Expect(3) = 1e-18
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = +2
Query: 80 QGGYSFRNLEGFNLAFLAKQGWRILQSPSSLVAGILKSKYFPSSFFLEATKGSRPSYLWQ 259
+GG FR+L FN A +AKQ WRI+Q+P SLVA ++K KYF S F+EA GS PSY+W+
Sbjct: 261 RGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWR 320
Score = 31.6 bits (70), Expect(3) = 1e-18
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 262 GRDLLSHGLHWRVGNGFSIKLRTDPWL 342
GR+++ GL WR+G+G +K+ WL
Sbjct: 325 GREVIRKGLRWRIGDGKLVKVYQSGWL 351
Score = 30.0 bits (66), Expect(3) = 1e-18
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 12 FWWEADSHHKRICWRAWEDLCRPKE 86
FWW + I W WE LC+ K+
Sbjct: 236 FWWGKKREKRSIHWSKWERLCQAKK 260