BLASTX nr result

ID: Rauwolfia21_contig00051105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00051105
         (451 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum]                      87   3e-15
ref|XP_006353656.1| PREDICTED: cyclin-A2-1-like [Solanum tuberosum]    81   2e-13
ref|NP_001233768.1| cyclin A2 [Solanum lycopersicum] gi|5420276|...    78   1e-12
ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera]       62   8e-08
gb|EMJ16486.1| hypothetical protein PRUPE_ppa004940mg [Prunus pe...    57   2e-06

>dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum]
          Length = 493

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
 Frame = -1

Query: 448 NIATSHQHKKRAILGDGTNLACESSYINCINATKIQVDKQEKKGSVKRNPKVAPVVAGEK 269
           +IAT  Q K+RA+L D  N+  E+S++NCIN +KIQV    KKGS KRN K  P V+ + 
Sbjct: 70  SIATGVQPKRRAVLKDMKNVLHENSHMNCINGSKIQV----KKGSDKRNNKAKPAVSLKL 125

Query: 268 PQVIRGRKDNTKD---ELKIKAGVGISLPEKAKEPKTVQTSKSFTITGNSMANFMPAKQN 98
            Q+    K++  D   ++K++    IS     KE    Q S+  T     + + +P  ++
Sbjct: 126 SQLQEKGKEDIADKVKKVKVEGSQEISSGANCKEDMLPQLSRDVTPAQCGLVHLVPVNRS 185

Query: 97  LHKHFQLQ-CLSQIETRLCQKEQGLDELGITDI 2
             K F LQ  + + E+++CQK++G   LGI DI
Sbjct: 186 SCKAFPLQNVMKKDESKVCQKQEGFANLGIADI 218


>ref|XP_006353656.1| PREDICTED: cyclin-A2-1-like [Solanum tuberosum]
          Length = 492

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 51/148 (34%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
 Frame = -1

Query: 436 SHQHKKRAILGDGTNLACESSYINCINATKIQVDKQEKKGSVKRNPKVAPVVAGEKPQVI 257
           S Q K+RA+L D TN+ CE+ Y+NCIN +K QV    KK S KRN KV P +  +KP++ 
Sbjct: 74  SQQPKRRAVLRDVTNVLCENPYMNCINGSKFQV----KKFSDKRNSKVTPAILVKKPELE 129

Query: 256 RGRKDNTKDELKIKAGVGISLPEKA--KEPKTVQTSKSFTITGNSMANFMPAKQNLHKHF 83
             ++   ++  K+K         +A  K+    Q S+  T   + +A+ MP  ++     
Sbjct: 130 DRKESMIEEARKVKVEESQEHCSQAHFKDHPLTQPSEYITAAQSGLADLMPVNRSSCYGI 189

Query: 82  QLQ-CLSQIETRLCQKEQGLDELGITDI 2
            LQ    + E+++C K++G + LGI DI
Sbjct: 190 TLQNTTPKDESKVCLKQEGSNSLGIADI 217


>ref|NP_001233768.1| cyclin A2 [Solanum lycopersicum] gi|5420276|emb|CAB46642.1| cyclin
           A2 [Solanum lycopersicum]
          Length = 475

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
 Frame = -1

Query: 436 SHQHKKRAILGDGTNLACESSYINCINATKIQVDKQEKKGSVKRNPKVAPVVAGEKPQVI 257
           S Q K+RA+L D TN+ CE+ Y+NCIN +K QV    KK S KRN KV P +  +KP+ +
Sbjct: 57  SQQPKRRAVLRDVTNVLCENPYMNCINGSKFQV----KKFSDKRNSKVTPALLVKKPE-L 111

Query: 256 RGRKDNTKDE---LKIKAGVGISLPEKAKEPKTVQTSKSFTITGNSMANFMPAKQNLHKH 86
             RK++  +E   +K++           K+    Q S+  T   + + + MP  ++    
Sbjct: 112 EDRKESVIEEAKMVKVEESQEHCSQAHFKDHPFTQPSEYITAAQSGLVDLMPVNRSSCND 171

Query: 85  FQLQCLS-QIETRLCQKEQGLDELGITDI 2
             LQ  + + E+++C K++G + L I DI
Sbjct: 172 ITLQTTTPKDESKVCLKQEGSNSLSIADI 200


>ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera]
          Length = 533

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/68 (44%), Positives = 42/68 (61%)
 Frame = -1

Query: 430 QHKKRAILGDGTNLACESSYINCINATKIQVDKQEKKGSVKRNPKVAPVVAGEKPQVIRG 251
           QHK+RA L D TN+  E+SY+NCI+ TK+++ K+ K+G   ++ KVA  V  E PQV   
Sbjct: 111 QHKRRAALKDVTNVVSENSYMNCISTTKVEISKRAKRGPSNKSSKVALTVLVETPQVQED 170

Query: 250 RKDNTKDE 227
            K     E
Sbjct: 171 AKTKVTGE 178


>gb|EMJ16486.1| hypothetical protein PRUPE_ppa004940mg [Prunus persica]
          Length = 484

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
 Frame = -1

Query: 430 QHKKRAILGDGTNLACESSYINCINATKIQV--DKQEKKGSVKRNPKVAPVVAGEKPQVI 257
           Q K+RA+L D TN  C+ SY +C NATKIQV   K  KKG  K    V  V    K + +
Sbjct: 74  QRKRRAVLQDVTNACCKPSYGSCFNATKIQVKNSKPAKKGQAKLTKMVPSVALDSKTEAV 133

Query: 256 RG--RKDNTKDELKIKAGVGISLPEKAKEPKTVQTSKSFTITGNSMANFMPAKQN 98
           +G  + + T D   I    G  L    K+ K V+ S++ + +G+ +A+ + +  N
Sbjct: 134 QGIIKPELTSDLHSINLEDGNMLMWSTKDVKDVRQSENQS-SGSRVASKVQSPSN 187


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