BLASTX nr result

ID: Rauwolfia21_contig00049904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00049904
         (222 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX93376.1| F-box and associated interaction domains-containi...    57   3e-06
ref|XP_006447715.1| hypothetical protein CICLE_v10015426mg [Citr...    56   6e-06

>gb|EOX93376.1| F-box and associated interaction domains-containing protein,
           putative [Theobroma cacao]
          Length = 418

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/73 (43%), Positives = 41/73 (56%)
 Frame = -2

Query: 221 NGRLHWTAKPERSQGFRGRRIVSFDFSDELFRXXXXXXXXXVRWKNFHLSTLGGCLCMAV 42
           +GRLHW ++P R   +  RR++SFD +DE FR         +   NFHLS L GCL  AV
Sbjct: 246 SGRLHWVSRPRRY--YPARRLMSFDLADEQFREVPKPDCGGLNRCNFHLSVLRGCLAAAV 303

Query: 41  PGPGTGRSLDIWV 3
              G    L+IWV
Sbjct: 304 --YGNYGKLEIWV 314


>ref|XP_006447715.1| hypothetical protein CICLE_v10015426mg [Citrus clementina]
           gi|568830517|ref|XP_006469544.1| PREDICTED: F-box
           protein At3g07870-like isoform X1 [Citrus sinensis]
           gi|568830519|ref|XP_006469545.1| PREDICTED: F-box
           protein At3g07870-like isoform X2 [Citrus sinensis]
           gi|557550326|gb|ESR60955.1| hypothetical protein
           CICLE_v10015426mg [Citrus clementina]
          Length = 410

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/72 (44%), Positives = 39/72 (54%)
 Frame = -2

Query: 218 GRLHWTAKPERSQGFRGRRIVSFDFSDELFRXXXXXXXXXVRWKNFHLSTLGGCLCMAVP 39
           GRLHW  +P R    RG  IVSFD +DE FR         +   N+HL+ L GCL +AV 
Sbjct: 239 GRLHWVTRPRRYSPVRG--IVSFDIADEQFREVPKPDCGGLNRCNYHLTVLSGCLSVAV- 295

Query: 38  GPGTGRSLDIWV 3
             G    L+IWV
Sbjct: 296 -YGNYGKLEIWV 306