BLASTX nr result
ID: Rauwolfia21_contig00049772
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00049772
(245 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Viti... 64 2e-08
ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-... 64 3e-08
gb|EXB66342.1| MutS protein-5-like protein [Morus notabilis] 62 6e-08
ref|XP_002317341.2| hypothetical protein POPTR_0011s09190g [Popu... 62 8e-08
gb|EOY12305.1| MUTS [Theobroma cacao] 61 1e-07
ref|XP_006475043.1| PREDICTED: DNA mismatch repair protein MSH5-... 59 7e-07
ref|XP_004295833.1| PREDICTED: DNA mismatch repair protein MSH5-... 57 3e-06
dbj|BAB02831.1| unnamed protein product [Arabidopsis thaliana] 55 1e-05
ref|XP_006595730.1| PREDICTED: DNA mismatch repair protein MSH5-... 55 1e-05
ref|XP_006595729.1| PREDICTED: DNA mismatch repair protein MSH5-... 55 1e-05
ref|XP_006595728.1| PREDICTED: DNA mismatch repair protein MSH5-... 55 1e-05
gb|ESW14294.1| hypothetical protein PHAVU_008G268900g [Phaseolus... 55 1e-05
gb|ESW14293.1| hypothetical protein PHAVU_008G268900g [Phaseolus... 55 1e-05
ref|NP_188683.3| DNA mismatch repair protein MSH5 [Arabidopsis ... 55 1e-05
gb|ABO69626.1| MutS-like protein 5 [Arabidopsis thaliana] 55 1e-05
>ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Vitis vinifera]
Length = 807
Score = 64.3 bits (155), Expect = 2e-08
Identities = 25/33 (75%), Positives = 32/33 (96%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
MEE+DETEAVPQV+MAC++HG R+G+SYYDSS+
Sbjct: 1 MEEIDETEAVPQVYMACILHGHRVGISYYDSSI 33
>ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-like [Cucumis sativus]
gi|449519898|ref|XP_004166971.1| PREDICTED: DNA mismatch
repair protein MSH5-like [Cucumis sativus]
Length = 807
Score = 63.5 bits (153), Expect = 3e-08
Identities = 26/33 (78%), Positives = 32/33 (96%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
MEEVDETEAVPQ++MACV HG+++GVSYYDSS+
Sbjct: 1 MEEVDETEAVPQIYMACVKHGQKVGVSYYDSSI 33
>gb|EXB66342.1| MutS protein-5-like protein [Morus notabilis]
Length = 776
Score = 62.4 bits (150), Expect = 6e-08
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
MEE+DETEA+PQV+MAC+ HG R+G+SYYDSS+
Sbjct: 1 MEEIDETEALPQVYMACIQHGNRVGISYYDSSI 33
>ref|XP_002317341.2| hypothetical protein POPTR_0011s09190g [Populus trichocarpa]
gi|550327984|gb|EEE97953.2| hypothetical protein
POPTR_0011s09190g [Populus trichocarpa]
Length = 791
Score = 62.0 bits (149), Expect = 8e-08
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
MEE+DETEA PQV+MAC++HG R+G+SYYDSS+
Sbjct: 1 MEEIDETEAQPQVYMACILHGHRVGISYYDSSI 33
>gb|EOY12305.1| MUTS [Theobroma cacao]
Length = 818
Score = 61.2 bits (147), Expect = 1e-07
Identities = 25/32 (78%), Positives = 30/32 (93%)
Frame = +1
Query: 148 EEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
EE+DETEAVPQV+MAC+ HG RIG+SYYDSS+
Sbjct: 3 EEMDETEAVPQVYMACIQHGHRIGISYYDSSI 34
>ref|XP_006475043.1| PREDICTED: DNA mismatch repair protein MSH5-like [Citrus sinensis]
Length = 811
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +1
Query: 148 EEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
EE+DETEAV QV+MAC++HG R+GVSYYDSS+
Sbjct: 4 EEMDETEAVSQVYMACILHGHRVGVSYYDSSI 35
>ref|XP_004295833.1| PREDICTED: DNA mismatch repair protein MSH5-like [Fragaria vesca
subsp. vesca]
Length = 809
Score = 57.0 bits (136), Expect = 3e-06
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
+EE+DETEA+PQV+MAC+ G R+GVSYYDSS+
Sbjct: 2 VEEMDETEALPQVYMACIRQGHRVGVSYYDSSI 34
>dbj|BAB02831.1| unnamed protein product [Arabidopsis thaliana]
Length = 748
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
MEE+++TE PQV+MAC+ HG R+GVSYYD SV
Sbjct: 1 MEEMEDTETEPQVYMACIQHGRRVGVSYYDCSV 33
>ref|XP_006595730.1| PREDICTED: DNA mismatch repair protein MSH5-like isoform X3
[Glycine max]
Length = 782
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/33 (66%), Positives = 31/33 (93%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
ME++DE +AVPQV+MAC+++G RIGVSYYDS++
Sbjct: 1 MEDMDEIDAVPQVYMACILNGNRIGVSYYDSTL 33
>ref|XP_006595729.1| PREDICTED: DNA mismatch repair protein MSH5-like isoform X2
[Glycine max]
Length = 802
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/33 (66%), Positives = 31/33 (93%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
ME++DE +AVPQV+MAC+++G RIGVSYYDS++
Sbjct: 1 MEDMDEIDAVPQVYMACILNGNRIGVSYYDSTL 33
>ref|XP_006595728.1| PREDICTED: DNA mismatch repair protein MSH5-like isoform X1
[Glycine max]
Length = 812
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/33 (66%), Positives = 31/33 (93%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
ME++DE +AVPQV+MAC+++G RIGVSYYDS++
Sbjct: 1 MEDMDEIDAVPQVYMACILNGNRIGVSYYDSTL 33
>gb|ESW14294.1| hypothetical protein PHAVU_008G268900g [Phaseolus vulgaris]
Length = 808
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/33 (66%), Positives = 31/33 (93%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
ME++DE +AVPQV+MAC+++G RIGVSYYDS++
Sbjct: 1 MEDMDEIDAVPQVYMACILNGHRIGVSYYDSTL 33
>gb|ESW14293.1| hypothetical protein PHAVU_008G268900g [Phaseolus vulgaris]
Length = 800
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/33 (66%), Positives = 31/33 (93%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
ME++DE +AVPQV+MAC+++G RIGVSYYDS++
Sbjct: 1 MEDMDEIDAVPQVYMACILNGHRIGVSYYDSTL 33
>ref|NP_188683.3| DNA mismatch repair protein MSH5 [Arabidopsis thaliana]
gi|395406789|sp|F4JEP5.1|MSH5_ARATH RecName: Full=DNA
mismatch repair protein MSH5; Short=AtMSH5; AltName:
Full=MutS protein homolog 5 gi|332642863|gb|AEE76384.1|
DNA mismatch repair protein MSH5 [Arabidopsis thaliana]
Length = 807
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
MEE+++TE PQV+MAC+ HG R+GVSYYD SV
Sbjct: 1 MEEMEDTETEPQVYMACIQHGRRVGVSYYDCSV 33
>gb|ABO69626.1| MutS-like protein 5 [Arabidopsis thaliana]
Length = 807
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +1
Query: 145 MEEVDETEAVPQVFMACVMHGERIGVSYYDSSV 243
MEE+++TE PQV+MAC+ HG R+GVSYYD SV
Sbjct: 1 MEEMEDTETEPQVYMACIQHGRRVGVSYYDCSV 33