BLASTX nr result
ID: Rauwolfia21_contig00049693
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00049693
(298 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002720113.1| ycf3 [Jatropha curcas] gi|224979566|gb|ACN72... 78 1e-12
ref|YP_538849.1| photosystem I assembly protein Ycf3 [Solanum bu... 76 5e-12
ref|YP_005090179.1| ycf3 gene product (chloroplast) [Ricinus com... 76 5e-12
dbj|BAO50882.1| photosystem I assembly protein ycf3 (mitochondri... 75 7e-12
ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) ... 75 7e-12
ref|YP_538936.1| photosystem I assembly protein Ycf3 [Gossypium ... 75 7e-12
gb|AAZ03964.1| Ycf3 [Ranunculus macranthus] 75 7e-12
ref|YP_006503444.1| photosystem I assembly protein Ycf3 (chlorop... 75 7e-12
ref|YP_004327663.1| photosystem I assembly protein ycf3 [Hevea b... 75 7e-12
ref|YP_784474.1| photosystem I assembly protein ycf3 [Piper ceno... 75 7e-12
gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast)... 75 9e-12
gb|AEZ48760.1| photosystem I assembly protein Ycf3, partial [Cen... 75 1e-11
gb|ABU85615.1| photosystem I assembly protein ycf3 [Scaevola aem... 74 2e-11
ref|YP_817483.1| photosystem I assembly protein ycf3 [Coffea ara... 74 2e-11
ref|YP_009002259.1| photosystem I assembly protein Ycf3 (chlorop... 74 2e-11
emb|CCQ71621.1| photosystem I assembly protein Ycf3 (chloroplast... 74 2e-11
ref|YP_008999936.1| hypothetical chloroplast RF34 (chloroplast) ... 74 2e-11
ref|YP_008993263.1| hypothetical chloroplast RF34 (chloroplast) ... 74 2e-11
ref|YP_008994480.1| hypothetical chloroplast RF34 (chloroplast) ... 74 2e-11
ref|YP_008963396.1| hypothetical chloroplast RF34 (chloroplast) ... 74 2e-11
>ref|YP_002720113.1| ycf3 [Jatropha curcas] gi|224979566|gb|ACN72693.1| ycf3 [Jatropha
curcas]
Length = 168
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+TT NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_538849.1| photosystem I assembly protein Ycf3 [Solanum bulbocastanum]
gi|122232537|sp|Q2MII6.1|YCF3_SOLBU RecName:
Full=Photosystem I assembly protein Ycf3
gi|84371896|gb|ABC56214.1| photosystem I assembly
protein ycf3 [Solanum bulbocastanum]
Length = 168
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+T NFIDKTFSIV+NILL +IPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRTNGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDG 42
>ref|YP_005090179.1| ycf3 gene product (chloroplast) [Ricinus communis]
gi|339516166|gb|AEJ82556.1| photosystem I assembly
protein Ycf3 [Ricinus communis]
Length = 169
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+ T NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRITGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>dbj|BAO50882.1| photosystem I assembly protein ycf3 (mitochondrion) [Hevea
brasiliensis] gi|584592177|dbj|BAO50928.1| photosystem I
assembly protein ycf3 (mitochondrion) [Hevea
brasiliensis]
Length = 168
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+ T NFIDKTFS+V+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRITGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) [Penthorum chinense]
gi|403226782|gb|AFR25661.1| hypothetical chloroplast
RF34 (chloroplast) [Penthorum chinense]
Length = 169
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/43 (86%), Positives = 39/43 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDGA 197
MPRS+ NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDGA
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGA 43
>ref|YP_538936.1| photosystem I assembly protein Ycf3 [Gossypium hirsutum]
gi|119368500|ref|YP_913188.1| PSI accumulation protein
[Gossypium barbadense] gi|325210931|ref|YP_004286005.1|
hypothetical chloroplast RF34 [Gossypium thurberi]
gi|372290933|ref|YP_005087694.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium raimondii]
gi|372291032|ref|YP_005087790.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium darwinii]
gi|372291386|ref|YP_005088281.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium tomentosum]
gi|372291484|ref|YP_005088377.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium herbaceum subsp.
africanum] gi|372291774|ref|YP_005088917.1| photosystem
I assembly protein Ycf3 (chloroplast) [Gossypium
mustelinum] gi|372291858|ref|YP_005089000.1| photosystem
I assembly protein Ycf3 (chloroplast) [Gossypium
arboreum] gi|386800838|ref|YP_006303492.1| photosystem I
assembly protein Ycf3 (chloroplast) [Gossypium
gossypioides] gi|394830627|ref|YP_006503278.1|
photosystem I assembly protein Ycf3 (chloroplast)
[Gossypium incanum] gi|394830714|ref|YP_006503361.1|
photosystem I assembly protein Ycf3 (chloroplast)
[Gossypium somalense] gi|394830889|ref|YP_006503527.1|
photosystem I assembly protein Ycf3 (chloroplast)
[Gossypium areysianum] gi|394830976|ref|YP_006503610.1|
photosystem I assembly protein Ycf3 (chloroplast)
[Gossypium robinsonii] gi|570758969|ref|YP_008992551.1|
hypothetical chloroplast RF34 (chloroplast) [Gossypium
bickii] gi|570759057|ref|YP_008992896.1| hypothetical
chloroplast RF34 (chloroplast) [Gossypium sturtianum]
gi|570759577|ref|YP_008992638.1| hypothetical
chloroplast RF34 (chloroplast) [Gossypium herbaceum]
gi|570759663|ref|YP_008992724.1| hypothetical
chloroplast RF34 (chloroplast) [Gossypium longicalyx]
gi|570879914|ref|YP_008992810.1| hypothetical
chloroplast RF34 (chloroplast) [Gossypium stocksii]
gi|122226162|sp|Q2L906.1|YCF3_GOSHI RecName:
Full=Photosystem I assembly protein Ycf3
gi|125991253|sp|A0ZZ36.1|YCF3_GOSBA RecName:
Full=Photosystem I assembly protein Ycf3
gi|85687417|gb|ABC73629.1| photosystem I assembly
protein ycf3 [Gossypium hirsutum]
gi|119224862|dbj|BAF41248.1| PSI accumulation protein
[Gossypium barbadense] gi|290775793|gb|ADD62289.1|
hypothetical chloroplast RF34 [Gossypium thurberi]
gi|318084317|gb|ADV38793.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium arboreum]
gi|318084400|gb|ADV38875.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium darwinii]
gi|318084485|gb|ADV38959.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium herbaceum subsp.
africanum] gi|318084569|gb|ADV39042.1| photosystem I
assembly protein Ycf3 (chloroplast) [Gossypium
mustelinum] gi|318084651|gb|ADV39123.1| photosystem I
assembly protein Ycf3 (chloroplast) [Gossypium
raimondii] gi|318084737|gb|ADV39208.1| photosystem I
assembly protein Ycf3 (chloroplast) [Gossypium
tomentosum] gi|326457128|gb|ADZ74391.1| hypothetical
chloroplast RF34 [Gossypium bickii]
gi|326457216|gb|ADZ74478.1| hypothetical chloroplast
RF34 [Gossypium herbaceum] gi|326457302|gb|ADZ74563.1|
hypothetical chloroplast RF34 [Gossypium longicalyx]
gi|326457389|gb|ADZ74649.1| hypothetical chloroplast
RF34 [Gossypium stocksii] gi|326457477|gb|ADZ74736.1|
hypothetical chloroplast RF34 [Gossypium sturtianum]
gi|329317072|gb|AEB90431.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium gossypioides]
gi|329317156|gb|AEB90514.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium hirsutum]
gi|329317240|gb|AEB90597.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium hirsutum]
gi|329317324|gb|AEB90680.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium barbadense]
gi|329317408|gb|AEB90763.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium barbadense]
gi|329317492|gb|AEB90846.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium barbadense]
gi|335354332|gb|AEH42952.1| photosystem I assembly
protein Ycf3 [Gossypium incanum]
gi|335354416|gb|AEH43035.1| photosystem I assembly
protein Ycf3 [Gossypium somalense]
gi|335354584|gb|AEH43201.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium areysianum]
gi|335354668|gb|AEH43284.1| photosystem I assembly
protein Ycf3 [Gossypium robinsonii]
Length = 168
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRSQ NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSQINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>gb|AAZ03964.1| Ycf3 [Ranunculus macranthus]
Length = 170
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/43 (86%), Positives = 39/43 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDGA 197
MPRS+ NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDGA
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGA 43
>ref|YP_006503444.1| photosystem I assembly protein Ycf3 (chloroplast) [Gossypium
capitis-viridis] gi|570758881|ref|YP_008992465.1|
hypothetical chloroplast RF34 (chloroplast) [Gossypium
anomalum] gi|326457040|gb|ADZ74304.1| hypothetical
chloroplast RF34 [Gossypium anomalum]
gi|335354500|gb|AEH43118.1| photosystem I assembly
protein Ycf3 (chloroplast) [Gossypium capitis-viridis]
Length = 168
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRSQ NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSQINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_004327663.1| photosystem I assembly protein ycf3 [Hevea brasiliensis]
gi|308523508|gb|ADO33558.1| photosystem I assembly
protein ycf3 [Hevea brasiliensis]
Length = 168
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+ T NFIDKTFS+V+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRITGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_784474.1| photosystem I assembly protein ycf3 [Piper cenocladum]
gi|122164361|sp|Q06GQ9.1|YCF3_PIPCE RecName:
Full=Photosystem I assembly protein Ycf3
gi|112253752|gb|ABI14473.1| photosystem I assembly
protein ycf3 [Piper cenocladum]
Length = 168
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRSQ NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSQINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast) [Solanum
carolinense]
Length = 44
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDGA 197
MPRS+ NFIDKTFSIV+NILL +IPTTSGEKEAFTYYRDGA
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDGA 43
>gb|AEZ48760.1| photosystem I assembly protein Ycf3, partial [Centrolepis monogyna]
Length = 169
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+T NFIDKTFSIV+NILL IIPTTSGEK+AFTYYRDG
Sbjct: 1 MPRSRTNGNFIDKTFSIVANILLRIIPTTSGEKKAFTYYRDG 42
>gb|ABU85615.1| photosystem I assembly protein ycf3 [Scaevola aemula]
Length = 168
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+ NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRVNGNFIDKTFSIVANILLQIIPTTSGEKEAFTYYRDG 42
>ref|YP_817483.1| photosystem I assembly protein ycf3 [Coffea arabica]
gi|122153622|sp|A0A336.1|YCF3_COFAR RecName:
Full=Photosystem I assembly protein Ycf3
gi|116242165|gb|ABJ89680.1| photosystem I assembly
protein ycf3 [Coffea arabica]
Length = 168
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRSQ NFIDKTFSIV+NILL IIPTTSGE+EAFTYYRDG
Sbjct: 1 MPRSQINGNFIDKTFSIVANILLRIIPTTSGEREAFTYYRDG 42
>ref|YP_009002259.1| photosystem I assembly protein Ycf3 (chloroplast) [Pinguicula
ehlersiae] gi|575882141|emb|CDL78815.1| photosystem I
assembly protein Ycf3 (chloroplast) [Pinguicula
ehlersiae]
Length = 168
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+ NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKEAFTYYRDG 42
>emb|CCQ71621.1| photosystem I assembly protein Ycf3 (chloroplast) [Salvia
miltiorrhiza]
Length = 168
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+ NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKEAFTYYRDG 42
>ref|YP_008999936.1| hypothetical chloroplast RF34 (chloroplast) [Agrostemma githago]
gi|576312302|ref|YP_009000186.1| hypothetical
chloroplast RF34 (chloroplast) [Silene paradoxa]
gi|555944022|gb|AGZ17926.1| hypothetical chloroplast
RF34 (chloroplast) [Agrostemma githago]
gi|555944275|gb|AGZ18176.1| hypothetical chloroplast
RF34 (chloroplast) [Silene paradoxa]
Length = 168
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+ NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_008993263.1| hypothetical chloroplast RF34 (chloroplast) [Magnolia dealbata]
Length = 168
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+ NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_008994480.1| hypothetical chloroplast RF34 (chloroplast) [Hypseocharis bilobata]
gi|540067559|gb|AGV02910.1| hypothetical chloroplast
RF34 (chloroplast) [Hypseocharis bilobata]
Length = 168
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRS+ NFIDKTFSIV+NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
>ref|YP_008963396.1| hypothetical chloroplast RF34 (chloroplast) [Sedum sarmentosum]
gi|402797531|gb|AFQ99063.1| hypothetical chloroplast
RF34 (chloroplast) [Sedum sarmentosum]
Length = 169
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +3
Query: 69 MPRSQTTRNFIDKTFSIVSNILL*IIPTTSGEKEAFTYYRDG 194
MPRSQ NFIDKTF+I++NILL IIPTTSGEKEAFTYYRDG
Sbjct: 1 MPRSQINGNFIDKTFTIIANILLQIIPTTSGEKEAFTYYRDG 42