BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00048959
         (1103 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95357.2| retrotransposon protein, putative, unclassified [...   230   5e-89
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      213   7e-85
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        217   1e-84
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ...   209   4e-83
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   195   4e-82
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...   195   4e-82
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...   201   1e-79
gb|AAG13430.1|AC051634_11 putative plant disease resistance poly...   206   2e-79
gb|AAP54661.2| retrotransposon protein, putative, unclassified [...   206   2e-79
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...   205   4e-79
gb|ABF94845.1| retrotransposon protein, putative, unclassified [...   204   7e-79
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]                197   1e-78
gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyp...   206   2e-78
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   198   3e-78
gb|ABA99961.1| retrotransposon protein, putative, unclassified [...   204   2e-77
gb|AAX96125.1| retrotransposon protein, putative, unclassified [...   196   3e-77
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]    196   4e-77
dbj|BAG72147.1| hypothetical protein [Lotus japonicus] gi|208609...   185   6e-77
gb|AAP54937.2| retrotransposon protein, putative, unclassified [...   194   6e-77
gb|ABA97104.1| retrotransposon protein, putative, unclassified [...   199   1e-76

>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2811

 Score =  230 bits (586), Expect(2) = 5e-89
 Identities = 114/266 (42%), Positives = 178/266 (66%), Gaps = 7/266 (2%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVLALP+F +PF+VET   D G+GA LMQ G PIAF SK+LGPR+Q LSTYEKE +A+  
Sbjct: 2145 PVLALPNFQQPFVVETDASDKGIGAVLMQNGHPIAFLSKALGPRTQGLSTYEKESLAIML 2204

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            A++ W++Y +   F+I TDH+S  FL  Q+++   QQK L K +GL +            
Sbjct: 2205 AIDHWRSYLQHDEFVIRTDHRSLSFLTNQRLSTPWQQKALTKLLGLRYKICYKKGLENGA 2264

Query: 736  ADALSRK-----FECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTA--ASYTCGN 578
            ADALSR+      E +A+S+ +P+W+++L + YQ D E Q+++  + +  A  +++   N
Sbjct: 2265 ADALSRRQSDGLEEVSAISICLPDWLQELIDGYQSDSEAQKLLQALSVSGAGPSNFEVQN 2324

Query: 577  GILKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLI 398
            GIL ++ ++++G +  ++ +I++ +H++   GHSG+L TY+R+K++F  P + +DVQ+ +
Sbjct: 2325 GILYFKHRIWIGHNKLLQQKILANLHTAAVGGHSGILVTYQRVKQLFSWPGMRKDVQEFV 2384

Query: 397  QQCETRQRCKPEHKVYPGLLQPLEIP 320
            Q C+  QR K EH  YPGLLQPLE+P
Sbjct: 2385 QHCDICQRAKSEHVKYPGLLQPLEVP 2410



 Score =  126 bits (316), Expect(2) = 5e-89
 Identities = 56/100 (56%), Positives = 76/100 (76%)
 Frame = -1

Query: 302  ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
            IT+DFIE +PKS   D + V+VD+F++F HF+ L HPFTA  VAQ F+E +   HGLP++
Sbjct: 2417 ITMDFIEGLPKSASFDCILVIVDKFSKFAHFLPLKHPFTAFGVAQLFMEHIHSIHGLPQA 2476

Query: 122  IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            IVS+RDR+FTS  W+ELF   G +L++SS+YHPQ+DG  E
Sbjct: 2477 IVSDRDRVFTSSLWKELFRRAGTQLRMSSSYHPQSDGQTE 2516


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  213 bits (543), Expect(2) = 7e-85
 Identities = 112/272 (41%), Positives = 169/272 (62%), Gaps = 6/272 (2%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVLALPDFS+PF + T     G+GA LMQ G P+AF SK+LGP++Q LSTYEKE MA+  
Sbjct: 926  PVLALPDFSQPFCIHTDASYYGVGAVLMQSGHPLAFLSKALGPKNQGLSTYEKEYMAIIL 985

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            A+ +W++Y +   FII TDH+S   L EQ++    QQK   K  GL +            
Sbjct: 986  AIAQWRSYLQLAEFIIYTDHRSLAQLNEQRLHTIWQQKMYTKLAGLQYKIVYRKGVDNGA 1045

Query: 736  ADALSRKFE----CNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTA--ASYTCGNG 575
            ADALSRK +    C A+S  VP W++++   Y  D   +Q++ Q+IL +A  A ++   G
Sbjct: 1046 ADALSRKVQEDSHCCAISHSVPTWLQEVVEGYDKDPTSKQLLAQLILNSADKAPFSLHQG 1105

Query: 574  ILKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQ 395
            I++++ ++++G +  ++ +++ AMH +   GHSG  ATY ++K++FY P +  DV + +Q
Sbjct: 1106 IIRHKNRIWLGGNLQLQQKVLQAMHDTAVGGHSGAPATYHKVKQMFYWPGMRADVLQYVQ 1165

Query: 394  QCETRQRCKPEHKVYPGLLQPLEIPESHFLTL 299
             C   Q+ KP+   YPGLLQPLE+P   + T+
Sbjct: 1166 SCTVCQQSKPDRAKYPGLLQPLEVPPQAWHTI 1197



 Score =  129 bits (323), Expect(2) = 7e-85
 Identities = 57/100 (57%), Positives = 78/100 (78%)
 Frame = -1

Query: 302  ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
            I++DFIE +P+S   + + VVVD+F+++GHF+ L HPFTA KVA+ FL+ V+K HGLP +
Sbjct: 1197 ISLDFIEGLPRSAHYNCILVVVDKFSKYGHFLPLLHPFTAAKVARVFLDNVYKLHGLPVN 1256

Query: 122  IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            I+S+RDRIFTS FWQ+LF   G  L +SS+YHPQ+DG  E
Sbjct: 1257 IISDRDRIFTSSFWQQLFQITGTNLSMSSSYHPQSDGQTE 1296


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  217 bits (552), Expect(2) = 1e-84
 Identities = 115/267 (43%), Positives = 167/267 (62%), Gaps = 7/267 (2%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVL+LPDF+K F++E   C  G+GA LMQ GRP+A+FSK+LGP++   S YEKE MA+  
Sbjct: 971  PVLSLPDFTKEFVIEADACGNGIGAVLMQSGRPLAYFSKTLGPKAAAQSIYEKEAMAILE 1030

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            A+ KW++Y  G   II TD QS KF++ Q++    Q K L K +   +           V
Sbjct: 1031 ALKKWRHYVLGSRLIIKTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDYSIEYKAGKENLV 1090

Query: 736  ADALSR---KFECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTA----ASYTCGN 578
            ADALSR     +C A++ ++PEWV D+  SY+GD +  +I++  ++GT      SY+   
Sbjct: 1091 ADALSRIPPAEQCQAITTVIPEWVRDIQRSYEGDVQAHKILS--LIGTEGDTDGSYSQEA 1148

Query: 577  GILKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLI 398
            G+L+Y+ ++YVG++  +R  +I + HSS   GHSG+ ATY RIK +FY P L + V+  I
Sbjct: 1149 GLLRYKGRIYVGENTEIREELIRSYHSSAFGGHSGMRATYHRIKSLFYWPGLKKAVEGFI 1208

Query: 397  QQCETRQRCKPEHKVYPGLLQPLEIPE 317
            ++C   Q  K EH   PGLL PLE+P+
Sbjct: 1209 RECPICQVTKAEHIHIPGLLDPLEVPD 1235



 Score =  124 bits (312), Expect(2) = 1e-84
 Identities = 51/102 (50%), Positives = 78/102 (76%)
 Frame = -1

Query: 308  SHITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLP 129
            +HIT+DF+E +PKS GKD + VVVDR T++ HFI + HP+T ++V + F+  + + HG+P
Sbjct: 1239 AHITMDFVEGLPKSNGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGMP 1298

Query: 128  ESIVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
             +I+++RDRIFTS  +QE+F ++ V+LK S++YHPQ DG  E
Sbjct: 1299 MAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTE 1340


>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1548

 Score =  209 bits (532), Expect(2) = 4e-83
 Identities = 109/264 (41%), Positives = 163/264 (61%), Gaps = 5/264 (1%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVL LP+F+KPF +ET  C  G+GA L QEG P+AF+SK+LG  +Q+LS YEKE +A+  
Sbjct: 907  PVLVLPNFAKPFTIETDACSTGIGAVLSQEGHPVAFYSKALGINNQKLSIYEKEFLAIMM 966

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            A++KW+ Y     F+I TDHQS   L +Q +    Q+K + K +GL +            
Sbjct: 967  AIDKWRPYLLRGPFVIRTDHQSLCHLDDQLLGSELQRKAMTKLIGLQYKFQYKRGAENKS 1026

Query: 736  ADALSRK---FECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQ--VILGTAASYTCGNGI 572
            ADALSR    F   A+S+  P WV+++ NSY  D + Q ++T+  ++   A+ ++  +G+
Sbjct: 1027 ADALSRVGHFFSLQAISIAQPVWVQEVVNSYVVDNQAQSLLTELAIMSPNASGFSLVHGL 1086

Query: 571  LKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQQ 392
            +K + ++++G +  +  +IIS+ H S   GHSGV+ATY R+K++F    L   V++ IQQ
Sbjct: 1087 IKKKGRIWLGANSALHTKIISSFHDSAIGGHSGVMATYHRVKKLFVWKGLKHSVEEFIQQ 1146

Query: 391  CETRQRCKPEHKVYPGLLQPLEIP 320
            C   Q+ K EH   PGLLQPL IP
Sbjct: 1147 CVVCQKAKHEHCSSPGLLQPLPIP 1170



 Score =  127 bits (319), Expect(2) = 4e-83
 Identities = 57/100 (57%), Positives = 75/100 (75%)
 Frame = -1

Query: 302  ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
            I++DFIE +P SKG D + VVVDRFT++ HF+ L HPFTA +VA  +L KV   +G+P+S
Sbjct: 1177 ISMDFIEGLPLSKGSDVILVVVDRFTKYAHFLPLKHPFTAVQVADNYLSKVASLYGMPKS 1236

Query: 122  IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            IVS+RD+IFTSHFWQ LF    + L L++ YHPQ+DG  E
Sbjct: 1237 IVSDRDKIFTSHFWQHLFKRFAIPLNLTTAYHPQSDGQTE 1276


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  195 bits (496), Expect(2) = 4e-82
 Identities = 104/264 (39%), Positives = 160/264 (60%), Gaps = 4/264 (1%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVLA+PDFS PF++E      G+GA LMQ GRP+A+ SK++GP++  LSTY+KE +A+  
Sbjct: 252  PVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAIGPKAAALSTYDKEALAILE 311

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            A+ KWK+Y  G + II TD  S K++ EQ+IT   Q K L K +   +            
Sbjct: 312  ALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKIEYKKGQENKA 371

Query: 736  ADALSRKFECNAV--SLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTAA--SYTCGNGIL 569
            ADALSR  + NA+  ++IVP+W+ +++ SY  D +  ++ + + +   +   YT   GIL
Sbjct: 372  ADALSRMQQLNALTTTVIVPQWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGGIL 431

Query: 568  KYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQQC 389
            +Y+  + VG    +R +++ + H S   GHSG  ATY+R+K++FY P +   V + ++ C
Sbjct: 432  RYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKAC 491

Query: 388  ETRQRCKPEHKVYPGLLQPLEIPE 317
               Q+ K EH +  GLLQPL +PE
Sbjct: 492  PVCQKNKTEHNMPAGLLQPLPLPE 515



 Score =  137 bits (346), Expect(2) = 4e-82
 Identities = 62/102 (60%), Positives = 79/102 (77%)
 Frame = -1

Query: 308 SHITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLP 129
           SHIT+DF+E +PKS+GKD + V+VDRFT++ HFI L+HPFTA ++  +FLE  +K HGLP
Sbjct: 519 SHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLP 578

Query: 128 ESIVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
             IVS+RDRIFTS  W+E+F   GVKL  SS YHPQ DG +E
Sbjct: 579 TVIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSE 620


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score =  195 bits (496), Expect(2) = 4e-82
 Identities = 104/264 (39%), Positives = 160/264 (60%), Gaps = 4/264 (1%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVLA+PDFS PF++E      G+GA LMQ GRP+A+ SK++GP++  LSTY+KE +A+  
Sbjct: 31   PVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAIGPKAAALSTYDKEALAILE 90

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            A+ KWK+Y  G + II TD  S K++ EQ+IT   Q K L K +   +            
Sbjct: 91   ALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKIEYKKGQENKA 150

Query: 736  ADALSRKFECNAV--SLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTAA--SYTCGNGIL 569
            ADALSR  + NA+  ++IVP+W+ +++ SY  D +  ++ + + +   +   YT   GIL
Sbjct: 151  ADALSRMQQLNALTTTVIVPQWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGGIL 210

Query: 568  KYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQQC 389
            +Y+  + VG    +R +++ + H S   GHSG  ATY+R+K++FY P +   V + ++ C
Sbjct: 211  RYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKAC 270

Query: 388  ETRQRCKPEHKVYPGLLQPLEIPE 317
               Q+ K EH +  GLLQPL +PE
Sbjct: 271  PVCQKNKTEHNMPAGLLQPLPLPE 294



 Score =  137 bits (346), Expect(2) = 4e-82
 Identities = 62/102 (60%), Positives = 79/102 (77%)
 Frame = -1

Query: 308 SHITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLP 129
           SHIT+DF+E +PKS+GKD + V+VDRFT++ HFI L+HPFTA ++  +FLE  +K HGLP
Sbjct: 298 SHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLP 357

Query: 128 ESIVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
             IVS+RDRIFTS  W+E+F   GVKL  SS YHPQ DG +E
Sbjct: 358 TVIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSE 399


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score =  201 bits (512), Expect(2) = 1e-79
 Identities = 106/272 (38%), Positives = 164/272 (60%), Gaps = 6/272 (2%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVLALPDFSK F +ET   DVG+GA L QE  PIA+ S++LGP+++ LSTYEKE MA+  
Sbjct: 924  PVLALPDFSKHFTIETDASDVGIGAVLSQEKHPIAYLSRALGPKTRGLSTYEKEYMAIIL 983

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            AV  W+ Y +   FII TDH S   L EQ++    QQK   K +GL +            
Sbjct: 984  AVEHWRPYLQQGEFIILTDHHSLMHLTEQRLHTPWQQKAFTKLLGLQYKICYRKGVSNAA 1043

Query: 736  ADALSRK----FECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVIL--GTAASYTCGNG 575
            ADALSR+     E  A+S  +P W+++L   YQ D + +Q++ ++ +   +   Y    G
Sbjct: 1044 ADALSRRESPISEVAAISECIPSWMQELMQGYQLDGQSKQLLAELAISPNSRKDYQLCQG 1103

Query: 574  ILKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQ 395
            ILKY+ K++VG +  ++ ++++ +H++   GHSG   TY+++K +F  P + + +++ +Q
Sbjct: 1104 ILKYKGKIWVGNNTALQHKLVNELHATPLGGHSGFPVTYRKVKSLFAWPGMKKLIKEQLQ 1163

Query: 394  QCETRQRCKPEHKVYPGLLQPLEIPESHFLTL 299
             C+   + KP+   YPGLLQPL +P   + T+
Sbjct: 1164 SCQVCLQAKPDRARYPGLLQPLPVPAGAWQTI 1195



 Score =  123 bits (309), Expect(2) = 1e-79
 Identities = 53/100 (53%), Positives = 76/100 (76%)
 Frame = -1

Query: 302  ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
            I++DFIE +P+S   + + VVVD+F+++ HFI L+HPF A  VAQEF++ ++K HGLP +
Sbjct: 1195 ISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYKLHGLPRA 1254

Query: 122  IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            I+S+RD+IFTS FW +LF+  G  L +SS YHPQ+DG  E
Sbjct: 1255 IISDRDKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTE 1294


>gb|AAG13430.1|AC051634_11 putative plant disease resistance polyprotein [Oryza sativa Japonica
            Group]
          Length = 921

 Score =  206 bits (524), Expect(2) = 2e-79
 Identities = 110/265 (41%), Positives = 166/265 (62%), Gaps = 5/265 (1%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVLALP F  PF +ET  C  GLGA L Q+G PIA++SK+LGP +Q+LS YEKE +A+  
Sbjct: 283  PVLALPYFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLGPVNQKLSIYEKEFLAIMM 342

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
             V+KW+ Y +   FII TDH+S   L ++ +    QQK + K +GL +           V
Sbjct: 343  VVDKWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQYSFQYKRGVDNIV 402

Query: 736  ADALSR---KFECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTAAS--YTCGNGI 572
            ADALSR     +  A+S++ P W++++ NSY  D + QQ++ ++ + +  S  Y+   GI
Sbjct: 403  ADALSRMPSSSQFCALSVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGI 462

Query: 571  LKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQQ 392
            +++Q K+++G + G+  ++I A H+S   GHSG+ ATY +IK++F  P L  DV+  ++Q
Sbjct: 463  IRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHQIKKLFAWPGLKLDVENFVKQ 522

Query: 391  CETRQRCKPEHKVYPGLLQPLEIPE 317
            C+  Q+ K EH   PGLL PL IP+
Sbjct: 523  CQVCQQAKHEHCRLPGLLAPLPIPK 547



 Score =  117 bits (294), Expect(2) = 2e-79
 Identities = 55/100 (55%), Positives = 74/100 (74%)
 Frame = -1

Query: 302 ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
           I++DFIE +P+S G +++ VVVDRFT++ +FI L HPFTA +VA    + VFK HG+P S
Sbjct: 553 ISMDFIEGLPRSDGYNAILVVVDRFTKYANFIPLCHPFTASQVAHLVDKTVFKTHGIPRS 612

Query: 122 IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
           IVS+RDR+FTS FW  LF T   +L++S+ YHPQ DG  E
Sbjct: 613 IVSDRDRLFTSKFWTTLFATWDTQLQMSTAYHPQIDGQTE 652


>gb|AAP54661.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 760

 Score =  206 bits (524), Expect(2) = 2e-79
 Identities = 110/265 (41%), Positives = 166/265 (62%), Gaps = 5/265 (1%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVLALP F  PF +ET  C  GLGA L Q+G PIA++SK+LGP +Q+LS YEKE +A+  
Sbjct: 122  PVLALPYFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLGPVNQKLSIYEKEFLAIMM 181

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
             V+KW+ Y +   FII TDH+S   L ++ +    QQK + K +GL +           V
Sbjct: 182  VVDKWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQYSFQYKRGVDNIV 241

Query: 736  ADALSR---KFECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTAAS--YTCGNGI 572
            ADALSR     +  A+S++ P W++++ NSY  D + QQ++ ++ + +  S  Y+   GI
Sbjct: 242  ADALSRMPSSSQFCALSVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGI 301

Query: 571  LKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQQ 392
            +++Q K+++G + G+  ++I A H+S   GHSG+ ATY +IK++F  P L  DV+  ++Q
Sbjct: 302  IRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHQIKKLFAWPGLKLDVENFVKQ 361

Query: 391  CETRQRCKPEHKVYPGLLQPLEIPE 317
            C+  Q+ K EH   PGLL PL IP+
Sbjct: 362  CQVCQQAKHEHCRLPGLLAPLPIPK 386



 Score =  117 bits (294), Expect(2) = 2e-79
 Identities = 55/100 (55%), Positives = 74/100 (74%)
 Frame = -1

Query: 302 ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
           I++DFIE +P+S G +++ VVVDRFT++ +FI L HPFTA +VA    + VFK HG+P S
Sbjct: 392 ISMDFIEGLPRSDGYNAILVVVDRFTKYANFIPLCHPFTASQVAHLVDKTVFKTHGIPRS 451

Query: 122 IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
           IVS+RDR+FTS FW  LF T   +L++S+ YHPQ DG  E
Sbjct: 452 IVSDRDRLFTSKFWTTLFATWDTQLQMSTAYHPQIDGQTE 491


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score =  205 bits (522), Expect(2) = 4e-79
 Identities = 110/266 (41%), Positives = 161/266 (60%), Gaps = 7/266 (2%)
 Frame = -2

Query: 1093 VLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDTA 914
            VLA+PDF  PF+VET   D G+GA LMQ   P+AF S++LG R   LSTYEKE +A+  A
Sbjct: 965  VLAMPDFQTPFVVETDASDKGIGAVLMQNNHPLAFLSRALGLRHPGLSTYEKESLAIMLA 1024

Query: 913  VNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXVA 734
            V+ W+ Y +   F I TDH+S  FL EQ++T   Q K L K +GL +            A
Sbjct: 1025 VDHWRPYLQHDEFFIRTDHRSLAFLTEQRLTTPWQHKALTKLLGLRYKIIFKKGIDNSAA 1084

Query: 733  DALSR-----KFECNAVSLIVPEWVEDLSNSYQGDKEV-QQIMTQVI-LGTAASYTCGNG 575
            DALSR     + E +A+S+ VPEW+ D+   Y  D +   ++ T  I  G   +++  NG
Sbjct: 1085 DALSRYPGSDRVELSALSVAVPEWINDIVAGYSSDPDACSKVQTLCINSGAVPNFSLRNG 1144

Query: 574  ILKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQ 395
            +L +Q +L+VG +  V+ RI++ +H++   GHSG+  TY+R+K++F  P+L   V + +Q
Sbjct: 1145 VLYFQNRLWVGHNVDVQQRILANLHTAAVGGHSGIQVTYQRVKQLFAWPRLRATVVQYVQ 1204

Query: 394  QCETRQRCKPEHKVYPGLLQPLEIPE 317
             C   Q+ K EH  YPG+LQPL +P+
Sbjct: 1205 ACSVCQQAKSEHVKYPGMLQPLPVPD 1230



 Score =  117 bits (294), Expect(2) = 4e-79
 Identities = 48/100 (48%), Positives = 75/100 (75%)
 Frame = -1

Query: 302  ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
            +++DF+E +PKS   + + VVVD+F+++ HF+ LTHPF+A  VA+ +++ + + HGLP+S
Sbjct: 1236 VSLDFVEGLPKSASFNCILVVVDKFSKYSHFVPLTHPFSALDVAEAYMQHIHRLHGLPQS 1295

Query: 122  IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            ++S+RDRIFTS  W  LF   G +L++SS+YHPQ DG  E
Sbjct: 1296 LISDRDRIFTSTLWTTLFRLAGTQLRMSSSYHPQTDGQTE 1335


>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 937

 Score =  204 bits (520), Expect(2) = 7e-79
 Identities = 110/265 (41%), Positives = 165/265 (62%), Gaps = 5/265 (1%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            P+LALP+F  PF +ET  C  GLGA L Q+G PIA++SK+LGP +Q+LS YEKE +A+  
Sbjct: 299  PMLALPNFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLGPVNQKLSIYEKEFLAIMM 358

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            AV+KW+ Y +   FII T H+    L +Q +    QQK + K +GL +           V
Sbjct: 359  AVDKWRCYLQRGPFIIKTYHKILCHLDDQILGTELQQKAMTKLMGLQYSFQYKRGVNNIV 418

Query: 736  ADALSR---KFECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTAAS--YTCGNGI 572
            ADALSR     +  A S++ P W++++ NSY  D + QQ++ ++ + +  S  Y+   GI
Sbjct: 419  ADALSRMPSSSQFCAFSVVQPIWIQEMINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGI 478

Query: 571  LKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQQ 392
            +++Q K+++G + G+  ++I A H+S   GHSG+ ATY RIK++F  P L  DV+  ++Q
Sbjct: 479  IRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHRIKKLFAWPGLKLDVENFVKQ 538

Query: 391  CETRQRCKPEHKVYPGLLQPLEIPE 317
            C+  Q+ K EH   PGLL PL IP+
Sbjct: 539  CQVCQQAKHEHCRLPGLLAPLPIPK 563



 Score =  117 bits (294), Expect(2) = 7e-79
 Identities = 55/100 (55%), Positives = 74/100 (74%)
 Frame = -1

Query: 302 ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
           I++DFIE +P+S G +++ VVVDRFT++ +FI L HPFTA +VA    + VFK HG+P S
Sbjct: 569 ISMDFIEGLPRSDGYNAILVVVDRFTKYANFIPLRHPFTASQVAHLVDKTVFKTHGIPRS 628

Query: 122 IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
           IVS+RDR+FTS FW  LF T   +L++S+ YHPQ DG  E
Sbjct: 629 IVSDRDRLFTSKFWTTLFATWDTQLQMSTAYHPQTDGQIE 668


>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
          Length = 1602

 Score =  197 bits (500), Expect(2) = 1e-78
 Identities = 104/267 (38%), Positives = 163/267 (61%), Gaps = 7/267 (2%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVL+LPDF K F VET   D G+GA L Q+  PIA+ SK+LGPR++ LSTYEKE MA+  
Sbjct: 907  PVLSLPDFQKTFTVETDASDCGIGAVLSQDKHPIAYVSKALGPRTRGLSTYEKECMAILL 966

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            AV+ W++Y +   FII TDH S   L +Q++    Q K   K +GL +            
Sbjct: 967  AVDHWRSYLQHGEFIILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYKICYRKGSSNAA 1026

Query: 736  ADALSRKF-----ECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTA--ASYTCGN 578
            ADALSRKF     E  A+S  VP+W+ +++  Y+ D +  ++++ + +       Y   N
Sbjct: 1027 ADALSRKFQDSNSEIFAISSSVPQWLMEVTQGYEKDAQAAKLLSTLAIHPEKHIHYFLDN 1086

Query: 577  GILKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLI 398
            GI++Y+ +++VG +  ++ ++I  +H+S   GHSG   TY++IK++F  P + + +++ +
Sbjct: 1087 GIIRYKNRIWVGNNPELQLKLIRELHASPVGGHSGFPVTYRKIKQLFAWPNMKKMIKESV 1146

Query: 397  QQCETRQRCKPEHKVYPGLLQPLEIPE 317
            Q+C+   + KP+   YPGLLQPL +PE
Sbjct: 1147 QRCQVCLQAKPDRLKYPGLLQPLPVPE 1173



 Score =  124 bits (312), Expect(2) = 1e-78
 Identities = 54/100 (54%), Positives = 75/100 (75%)
 Frame = -1

Query: 302  ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
            +++DFIE +PKS G + + VVVDRF+++ HF+ L HPFTA  VAQ ++  ++K HGLP++
Sbjct: 1179 VSLDFIEGLPKSAGYNCILVVVDRFSKYAHFVALKHPFTAIDVAQAYMFHIYKLHGLPQT 1238

Query: 122  IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            IVS+RD+IFTS  W++LF   G KL  SS YHPQ+DG  E
Sbjct: 1239 IVSDRDKIFTSQLWEQLFLRAGTKLHYSSAYHPQSDGQTE 1278


>gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyprotein [Oryza sativa Japonica
            Group] gi|108706266|gb|ABF94061.1| retrotransposon
            protein, putative, unclassified, expressed [Oryza sativa
            Japonica Group]
          Length = 1159

 Score =  206 bits (524), Expect(2) = 2e-78
 Identities = 110/265 (41%), Positives = 165/265 (62%), Gaps = 5/265 (1%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVLALP+F  PF +E   C  GLGA L Q+  PIA++SK+LGP +Q+LS YEKE +A+  
Sbjct: 83   PVLALPNFQLPFTLENDACAYGLGAVLSQQSHPIAYYSKTLGPVNQKLSIYEKEFLAIMM 142

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            AV+KW+ Y +   FII TDH+S   L +Q +    QQK + K +GL +           V
Sbjct: 143  AVDKWRCYLQRGPFIIKTDHKSLCHLDDQILGTELQQKAMTKLMGLQYSFQYKRGVDNIV 202

Query: 736  ADALSR---KFECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTAAS--YTCGNGI 572
            ADALSR     +  A+S++ P W++++ NSY  D + QQ++ ++ + +  S  Y+   GI
Sbjct: 203  ADALSRMPSSSQFCALSVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGI 262

Query: 571  LKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQQ 392
            +++Q K+++G + G+  ++I A H+S   GHSG+ ATY R K++F  P L  DV+  ++Q
Sbjct: 263  IRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHRFKKLFAWPGLKLDVENFVKQ 322

Query: 391  CETRQRCKPEHKVYPGLLQPLEIPE 317
            C+  Q+ K EH   PGLL PL IP+
Sbjct: 323  CQVCQQAKHEHCRLPGLLAPLPIPK 347



 Score =  114 bits (285), Expect(2) = 2e-78
 Identities = 54/100 (54%), Positives = 72/100 (72%)
 Frame = -1

Query: 302 ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
           I++DFIE +P+S G +++ VVVDRFT++  FI L HPFTA +VA    + VFK  G+P S
Sbjct: 353 ISMDFIEGLPRSDGYNAILVVVDRFTKYADFIPLRHPFTASQVAHLVDKTVFKTQGIPRS 412

Query: 122 IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
           IVS+RDR+FTS FW  LF T   +L++S+ YHPQ DG  E
Sbjct: 413 IVSDRDRLFTSKFWTTLFATWDTQLQMSTAYHPQTDGQTE 452


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  198 bits (503), Expect(2) = 3e-78
 Identities = 117/278 (42%), Positives = 164/278 (58%), Gaps = 8/278 (2%)
 Frame = -2

Query: 1099 PPVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALD 920
            PPVLALPDFS PF ++     +G+GA LMQ+GRP+A+ S+++  ++ +LSTYEKELMAL 
Sbjct: 847  PPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMSQAIHGKALQLSTYEKELMALV 906

Query: 919  TAVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXX 740
             AV KW++Y  GH F I TD  S K+L+EQK+    QQKW+ K +G  F           
Sbjct: 907  LAVKKWRSYLLGHNFKIQTDQXSLKYLLEQKMGTPLQQKWITKLLGYEFVVEYKQGKENK 966

Query: 739  VADALSRKFE------CNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTAAS--YTC 584
            VADALSRK E        A++     W+E L   Y  D ++QQI+  +  G+ AS  Y  
Sbjct: 967  VADALSRKMEDQKEGKLYAITAPANTWLEQLRTXYAIDPKLQQIIKNLEQGSLASQNYKQ 1026

Query: 583  GNGILKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQK 404
             +G+L Y+ +LY+  S  +R +I+  +HSS   GHSG   T  R K  FY   + ++V++
Sbjct: 1027 RDGLLFYKGRLYIPASKELREQILYLLHSSPQGGHSGFHKTLHRAKSEFYWEGMRKEVRR 1086

Query: 403  LIQQCETRQRCKPEHKVYPGLLQPLEIPESHFLTLPWT 290
             I++C+  Q+ K E+    GLLQPL IP     T  WT
Sbjct: 1087 FIKECDICQQNKSENIHPAGLLQPLPIP-----TKVWT 1119



 Score =  122 bits (305), Expect(2) = 3e-78
 Identities = 56/105 (53%), Positives = 73/105 (69%)
 Frame = -1

Query: 317  KPLSHITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFH 138
            K  + I++DFIE +P S+    + VVVDR +++ HFI ++HP+TA K+AQ FL  +FK H
Sbjct: 1116 KVWTDISLDFIEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLH 1175

Query: 137  GLPESIVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            GLP SIV++RD  FTS FW+ELF   G  LK SS YHPQ DG  E
Sbjct: 1176 GLPNSIVTDRDPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTE 1220


>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1619

 Score =  204 bits (518), Expect(2) = 2e-77
 Identities = 113/267 (42%), Positives = 162/267 (60%), Gaps = 7/267 (2%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVLALPDFS PF+VET   D G+GA LMQ   P+AF SK+LGPR   LSTYEKE +A+  
Sbjct: 945  PVLALPDFSIPFVVETDASDKGIGAVLMQRNHPVAFLSKALGPRHLGLSTYEKESLAIML 1004

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            A++ W+ Y +   F I TDH+S  FL EQ++T   Q K L K +GL +            
Sbjct: 1005 AIDHWRPYLQHAEFSIRTDHRSLAFLDEQRLTTPWQHKALTKLLGLQYKILYKKGSENSA 1064

Query: 736  ADALSR-----KFECNAVSLIVPEWVEDLSNSYQGDKE-VQQIMTQVILGTA-ASYTCGN 578
            ADALSR         +A+S+ +PEW +++   Y  D + + ++ T  I  +A   +T  N
Sbjct: 1065 ADALSRYPDKETVVLSALSVCIPEWTQEVIEGYAQDSDSLSKVQTLCINNSAIPDFTLKN 1124

Query: 577  GILKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLI 398
            G+L ++ K+++G +  V+ +I++ +H++   GHSG+  TY+RIK++F    L  DV K I
Sbjct: 1125 GLLYFKDKMWIGNNPIVQRKILANLHTAAIGGHSGITMTYQRIKQLFAWIGLRSDVVKFI 1184

Query: 397  QQCETRQRCKPEHKVYPGLLQPLEIPE 317
            Q C   Q+ K EH  YPG+LQPL +PE
Sbjct: 1185 QHCTICQQAKGEHVKYPGMLQPLPVPE 1211



 Score =  114 bits (284), Expect(2) = 2e-77
 Identities = 46/100 (46%), Positives = 75/100 (75%)
 Frame = -1

Query: 302  ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
            +++DFIE +P+S   + + VVVD+F+++ HF+ L HPFT  +VA+ +++ + + HGLPE+
Sbjct: 1217 VSLDFIEGLPRSSTFNCILVVVDKFSKYAHFVALAHPFTTLEVAEAYMQHIHRLHGLPEA 1276

Query: 122  IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            I+S++DRIFTS+ W  LF   G +L++SS+YHPQ+D   E
Sbjct: 1277 IISDQDRIFTSNLWTTLFRLAGTQLRMSSSYHPQSDRQTE 1316


>gb|AAX96125.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|77550700|gb|ABA93497.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  196 bits (499), Expect(2) = 3e-77
 Identities = 102/273 (37%), Positives = 167/273 (61%), Gaps = 7/273 (2%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVLALPDF+K F++ET   D G+GA L Q+  PIA+ SK+LGPR++ LSTYEKE +++  
Sbjct: 767  PVLALPDFNKTFVIETDASDSGIGAVLSQDKHPIAYVSKALGPRTKGLSTYEKECLSILL 826

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            AV+ W++Y +   F+I TDH+S   L +Q++  + QQK   K +GL F            
Sbjct: 827  AVDHWRSYLQYAEFLILTDHKSLMNLTDQRLHTSWQQKAYTKLLGLKFKIYYKKGIHNGA 886

Query: 736  ADALSR-----KFECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTA--ASYTCGN 578
            ADALSR       E  A+S+  P W+E+++  Y  D +  +++ Q+ +     + Y   +
Sbjct: 887  ADALSRCDHGEPLEVAAISICKPTWLEEVAEGYLHDAKSAKLLAQLSIQNLEDSPYKLKD 946

Query: 577  GILKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLI 398
            G+++Y+ ++++G +  ++ +I SA+H S+  GHSG   TY+RIK +F  P + + ++  +
Sbjct: 947  GLIRYKGRIWLGHNSALQNKIFSALHDSSIGGHSGFPVTYRRIKTLFAWPDMKKQIKLKV 1006

Query: 397  QQCETRQRCKPEHKVYPGLLQPLEIPESHFLTL 299
            ++C   Q+ KP+   YPGLLQPL +P   + T+
Sbjct: 1007 KECSICQQAKPDRFRYPGLLQPLLVPSGAWQTV 1039



 Score =  120 bits (301), Expect(2) = 3e-77
 Identities = 52/100 (52%), Positives = 75/100 (75%)
 Frame = -1

Query: 302  ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
            +T+DFIE +PKS+  + + VVVD+ + + HF+ L HPF+A  VAQ ++E VFK HGLP +
Sbjct: 1039 VTMDFIEGLPKSRRFNCIMVVVDKLSRYAHFLPLAHPFSAADVAQLYMEGVFKLHGLPLA 1098

Query: 122  IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            +VS+ D+IFTS+FW++LF +V  KL +S+ YHPQ DG  E
Sbjct: 1099 VVSDHDKIFTSNFWEQLFQSVSTKLHMSTAYHPQTDGQTE 1138


>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
          Length = 933

 Score =  196 bits (498), Expect(2) = 4e-77
 Identities = 109/280 (38%), Positives = 157/280 (56%), Gaps = 7/280 (2%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVLALP+F + F +ET   D+G+GA L Q   P+AF SK+LGPR+Q LSTYEKE +A+  
Sbjct: 263  PVLALPNFQQGFTIETDASDIGIGAVLSQNQHPVAFVSKALGPRTQGLSTYEKECLAIMM 322

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            AV+ W+ Y +   F+I TDH S   L EQ++    QQK   K  GL F            
Sbjct: 323  AVDHWRPYLQFQEFLIITDHHSLMHLTEQRLHTPWQQKAFTKLSGLQFQIVYRKGKHNAA 382

Query: 736  ADALSRKF-----ECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTAA--SYTCGN 578
            ADALSR       E   +S   P W++D+ + Y  D     ++T + +  ++   Y+   
Sbjct: 383  ADALSRHVPEETSEFLGISTCSPVWLQDILHGYDQDPLALSLLTGLAVNPSSYPHYSLSK 442

Query: 577  GILKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLI 398
            G++K++ K++VG +  ++ +IISA+H S   GHSG   TYKRIK +F  P +   VQK +
Sbjct: 443  GLIKHKGKVWVGNNSNIQQQIISALHDSPLGGHSGFPVTYKRIKSLFSWPHMKLTVQKQL 502

Query: 397  QQCETRQRCKPEHKVYPGLLQPLEIPESHFLTLPWTLLKM 278
              C    + KP+   YPGLLQPL +P+       W ++ M
Sbjct: 503  ASCAVCLQAKPDRSKYPGLLQPLPVPDG-----AWQIISM 537



 Score =  120 bits (301), Expect(2) = 4e-77
 Identities = 54/100 (54%), Positives = 76/100 (76%)
 Frame = -1

Query: 302 ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
           I++DFIE +PKS  +D + VVVD+F+++ HF+ L+HPF+A  VA+ F+  V+K HGLP+ 
Sbjct: 535 ISMDFIEGLPKSYHQDCILVVVDKFSKYAHFMPLSHPFSALDVAKVFMLNVYKLHGLPQI 594

Query: 122 IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
           I+S+RD+IFTS  W++LF   G KL LSS YHPQ+DG  E
Sbjct: 595 IISDRDKIFTSALWEQLFLRSGTKLHLSSAYHPQSDGQTE 634


>dbj|BAG72147.1| hypothetical protein [Lotus japonicus] gi|208609053|dbj|BAG72149.1|
            hypothetical protein [Lotus japonicus]
          Length = 1520

 Score =  185 bits (469), Expect(2) = 6e-77
 Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 3/276 (1%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVL  P+F KPF++ET     GLGA LMQEGRP+A+ SK+L  R+Q  S YE+ELMA+  
Sbjct: 871  PVLVPPNFDKPFILETDASGKGLGAVLMQEGRPVAYMSKTLSDRAQAKSVYERELMAVVL 930

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            AV KW++Y  G  F+I TD +S +FL +Q+I    QQKW++K +G  F            
Sbjct: 931  AVQKWRHYLLGSQFVIHTDQRSLRFLADQRIMGEEQQKWMSKLMGYDFEIKYKPGIENKA 990

Query: 736  ADALSRKFECNAVSLI-VPEWVEDLSNSYQGDKEVQQIMTQVIL--GTAASYTCGNGILK 566
            ADALSRK + +A+S +   EW  DL     GD+  ++++ ++     +A  Y    G L 
Sbjct: 991  ADALSRKLQFSAISSVQCAEWA-DLEAEILGDERYRKVLQELATQGNSAIGYQLKRGRLL 1049

Query: 565  YQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQQCE 386
            Y+ ++ + K       ++   H +   GH+G+  TYKRI  +FY   +  D+Q  +Q+CE
Sbjct: 1050 YKDRIVLPKGSTKILTVLKEFHDTALGGHAGIFRTYKRISALFYWEGMKLDIQNYVQKCE 1109

Query: 385  TRQRCKPEHKVYPGLLQPLEIPESHFLTLPWTLLKM 278
              QR K E     G LQPL IP        WT + M
Sbjct: 1110 VCQRNKYEALNPAGFLQPLPIPSQ-----GWTDISM 1140



 Score =  130 bits (328), Expect(2) = 6e-77
 Identities = 57/100 (57%), Positives = 76/100 (76%)
 Frame = -1

Query: 302  ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
            I++DFI  +PK+ GKD++ VVVDRFT++ HFI L+HP+ AK++A+ F+++V K HG P S
Sbjct: 1138 ISMDFIGGLPKAMGKDTILVVVDRFTKYAHFIALSHPYNAKEIAEVFIKEVVKLHGFPTS 1197

Query: 122  IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            IVS+RDR+F S FW E+F   G KLK SS YHPQ DG  E
Sbjct: 1198 IVSDRDRVFLSTFWSEMFKLAGTKLKFSSAYHPQTDGQTE 1237


>gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1477

 Score =  194 bits (494), Expect(2) = 6e-77
 Identities = 106/278 (38%), Positives = 164/278 (58%), Gaps = 7/278 (2%)
 Frame = -2

Query: 1090 LALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDTAV 911
            L++ +F+ PF+VET   D G+GA L QEG PIA+ SK+LGPRS+ LSTYEKE MA+  AV
Sbjct: 882  LSITNFNFPFIVETDASDGGIGAVLSQEGHPIAYLSKALGPRSKGLSTYEKECMAILLAV 941

Query: 910  NKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXVAD 731
              W++Y +   F+I TDH S   L +Q++    QQK   K +GL +            AD
Sbjct: 942  EHWRSYLQHQEFMILTDHHSLTHLSDQRLHTPWQQKAFTKLLGLQYRIVYRKGSANSAAD 1001

Query: 730  ALSRK-----FECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTAA--SYTCGNGI 572
            ALSRK      +  AVS   P W++++   Y+ DK   Q++ ++ L   A   YT   G+
Sbjct: 1002 ALSRKDLGDSAQILAVSSCSPSWLQEVIQGYEQDKFSSQLLAELSLNPKAREHYTLQQGL 1061

Query: 571  LKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLIQQ 392
            ++Y+ +++VG +  ++ ++I  +H + + GHSG   TY+RIK +F    + + +Q+ ++Q
Sbjct: 1062 IRYKGRIWVGNNTDLQLKLIKELHDNPAGGHSGFPVTYRRIKHLFAWLGMKQQIQQQLKQ 1121

Query: 391  CETRQRCKPEHKVYPGLLQPLEIPESHFLTLPWTLLKM 278
            C+  Q+ KPE   YPGLLQPL +P+       W ++ M
Sbjct: 1122 CQICQQAKPERVKYPGLLQPLPVPKG-----AWQVISM 1154



 Score =  121 bits (303), Expect(2) = 6e-77
 Identities = 53/100 (53%), Positives = 74/100 (74%)
 Frame = -1

Query: 302  ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
            I++DFIE +P S   + + VVVD+F+++ HF+ LTHPFTA  VA  F++ V+K HG+P+ 
Sbjct: 1152 ISMDFIEGLPTSDKYNCILVVVDKFSKYAHFLPLTHPFTAFSVATVFMKNVYKLHGMPQV 1211

Query: 122  IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            I+S+RDR+FTS  W+ LFT  G KL +SS+YHPQ DG  E
Sbjct: 1212 IISDRDRVFTSQLWEHLFTKSGTKLHMSSSYHPQTDGQTE 1251


>gb|ABA97104.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1412

 Score =  199 bits (507), Expect(2) = 1e-76
 Identities = 108/280 (38%), Positives = 165/280 (58%), Gaps = 7/280 (2%)
 Frame = -2

Query: 1096 PVLALPDFSKPFLVETYPCDVGLGAALMQEGRPIAFFSKSLGPRSQRLSTYEKELMALDT 917
            PVL+LPDFS PF +ET   D G+GA L Q G PIAF SK+LG +++ LSTYEKE +A+  
Sbjct: 816  PVLSLPDFSLPFTIETDASDEGIGAVLSQCGHPIAFLSKALGVKTKGLSTYEKEYLAILL 875

Query: 916  AVNKWKNYPEGHTFIIGTDHQSSKFLVEQKITIAAQQKWLAKFVGLSFXXXXXXXXXXXV 737
            AV+ W++Y +   F+I TDH S   L EQ++    Q K   K +GL F            
Sbjct: 876  AVDHWRSYLQQQEFVILTDHHSLMHLNEQRLHTPWQHKAFTKLLGLQFKICYRKGSSNAA 935

Query: 736  ADALSRKF-----ECNAVSLIVPEWVEDLSNSYQGDKEVQQIMTQVILGTAA--SYTCGN 578
            A+ALSRK+     E + VS   P W++++S+ Y  D    Q++T + L   +  +++  N
Sbjct: 936  ANALSRKYPEELSELHVVSSCSPVWLQEVSDGYLQDVFSAQLLTDLTLNAESRPNFSLCN 995

Query: 577  GILKYQCKLYVGKSGGVRGRIISAMHSSNSRGHSGVLATYKRIKRVFY*PKLLEDVQKLI 398
            G+L+++ ++++  +  V+ +IISA+HSS   GHSG   TY +IK +F  PK+ + +   +
Sbjct: 996  GVLRFKGRVWIDNNPSVQDKIISALHSSPLGGHSGFPVTYSKIKSLFAWPKMKKQIHTAV 1055

Query: 397  QQCETRQRCKPEHKVYPGLLQPLEIPESHFLTLPWTLLKM 278
            + C    + KP+H  YPGLLQPL +P+       W ++ M
Sbjct: 1056 KTCGICMQAKPDHSKYPGLLQPLPVPDG-----AWQIITM 1090



 Score =  115 bits (288), Expect(2) = 1e-76
 Identities = 52/100 (52%), Positives = 73/100 (73%)
 Frame = -1

Query: 302  ITVDFIEDVPKSKGKDSVPVVVDRFTEFGHFIGLTHPFTAKKVAQEFLEKVFKFHGLPES 123
            IT+DFIE +PKS   + + VVVD+F+++ HF  L+HPF+A  VAQ F+  V+K HGLP+ 
Sbjct: 1088 ITMDFIEGLPKSGQFNCILVVVDKFSKYSHFFPLSHPFSAIDVAQSFMVNVYKLHGLPKF 1147

Query: 122  IVSERDRIFTSHFWQELFTTVGVKLKLSSTYHPQADGHAE 3
            I+S+RD+I TSHFW++LF   G +L+LS+ YH Q D   E
Sbjct: 1148 IISDRDKILTSHFWEQLFLRTGTQLQLSTAYHLQTDEQTE 1187