BLASTX nr result

ID: Rauwolfia21_contig00048937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00048937
         (314 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66647.1| hypothetical protein VITISV_018785 [Vitis vinifera]    68   1e-09
ref|XP_004308801.1| PREDICTED: uncharacterized protein LOC101301...    68   1e-09
ref|XP_002316346.2| hypothetical protein POPTR_0010s22530g [Popu...    66   4e-09
gb|EOY18569.1| Uncharacterized protein TCM_043091 [Theobroma cacao]    61   2e-07
ref|XP_002311110.2| hypothetical protein POPTR_0008s04290g [Popu...    57   3e-06
ref|XP_002529714.1| conserved hypothetical protein [Ricinus comm...    55   1e-05

>emb|CAN66647.1| hypothetical protein VITISV_018785 [Vitis vinifera]
          Length = 273

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 43/97 (44%), Positives = 56/97 (57%)
 Frame = -3

Query: 303 FSVHNISVLASPGKFRWYLLFGIARFPTEMALRDMKNRQNRRIPPSPLFRSECSGEKKVS 124
           F+   + ++  P K +W + FG+ R PTEM LRD+KNRQ+RR  PS L  S   G KK  
Sbjct: 171 FTFPRMPIMTYPPKSQWQMFFGMVRIPTEMELRDIKNRQSRR-TPSMLVTSPEEG-KKGG 228

Query: 123 GSTTDAECKSRGRRLWGLLEVLVSVSHRYANTVVMAS 13
           G       K +G+ LWGLL+ L   S  +ANTV  AS
Sbjct: 229 GH------KRKGKSLWGLLKAL-GCSSSHANTVAKAS 258


>ref|XP_004308801.1| PREDICTED: uncharacterized protein LOC101301053 [Fragaria vesca
           subsp. vesca]
          Length = 249

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
 Frame = -3

Query: 288 ISVLASP-GKFRWYL-LFGIARFPTEMALRDMKNRQNRRIPPSPLF--RSECSGEKKVSG 121
           +S+L+S   K +WYL +FG+ARFPTEM LRD+K+RQ+RR  PS +F   SE S E    G
Sbjct: 154 VSILSSNRSKSKWYLFMFGMARFPTEMELRDIKSRQSRR-SPSTMFGANSEASDELMGKG 212

Query: 120 STTDAECKSRGRRLWGLLEVLVSVSHRYANTVVMAS 13
           +   ++  +R + LWGLL   +    ++ N VV +S
Sbjct: 213 NKEISDSSNRAKGLWGLLRA-IGCRSQHPNAVVKSS 247


>ref|XP_002316346.2| hypothetical protein POPTR_0010s22530g [Populus trichocarpa]
           gi|550330372|gb|EEF02517.2| hypothetical protein
           POPTR_0010s22530g [Populus trichocarpa]
          Length = 247

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = -3

Query: 303 FSVHNISVLASPGKFRWYL-LFGIARFPTEMALRDMKNRQNRRIPPSPLFRSECSGEKKV 127
           FS+  +S+L +P K RWY   FG+ RFP EM L D+K RQN++  PS +F+SE       
Sbjct: 163 FSMKKVSILVTPVKPRWYFSAFGVGRFPMEMELSDIKTRQNKK-SPSKMFQSE------- 214

Query: 126 SGSTTDAECKSRGRRLWGLLEVLVSVSH 43
                +   K RG+ LW LL VL   SH
Sbjct: 215 --KGIEMSSKKRGKGLWSLLRVLRHNSH 240


>gb|EOY18569.1| Uncharacterized protein TCM_043091 [Theobroma cacao]
          Length = 289

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
 Frame = -3

Query: 303 FSVHNISVLASPGKFRWYLL-FGIARFPTEMALRDMKNRQNRRIPPSPLFRSECSGEKKV 127
           FSV  +SV+ +P K RWYL  FG+ RFP E+ L+DMK RQ+R+     L         + 
Sbjct: 190 FSVKKVSVIETPVKSRWYLFAFGVGRFPMEIELKDMKMRQSRKSKAMKL---------QP 240

Query: 126 SGSTTDAECKSRGRR----LWGLLEVLVSVSHRYANTVVM 19
            G   +A+C    RR    LW LL+VL   ++++ N  V+
Sbjct: 241 DGQPENAKCNKERRRSAKGLWRLLKVL-GCNNKHTNAAVV 279


>ref|XP_002311110.2| hypothetical protein POPTR_0008s04290g [Populus trichocarpa]
           gi|550332406|gb|EEE88477.2| hypothetical protein
           POPTR_0008s04290g [Populus trichocarpa]
          Length = 255

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
 Frame = -3

Query: 303 FSVHNISVLASPGKFRWYLL-FGIARFPTEMALRDMKNRQNRRIPPSPLFRSECSGEKKV 127
           FS+  +S+LA+P K RWY L FG+ R P EM L D+K RQ+++  PS + +S    EK +
Sbjct: 163 FSMKKVSILATPTKPRWYFLAFGVGRLPMEMELSDIKMRQSKK-SPSRMIQS----EKVI 217

Query: 126 SGSTTDAECKSRGRRLWGLLEVL 58
             S+ +     RG+  W LL VL
Sbjct: 218 ETSSGN----KRGKGSWSLLRVL 236


>ref|XP_002529714.1| conserved hypothetical protein [Ricinus communis]
           gi|223530816|gb|EEF32680.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
 Frame = -3

Query: 306 KFSVHNISVLASPGKFRWYLL-FGIARFPTEMALRDMKNRQNRRIPPSPLFRSECSGEKK 130
           + S+  +S+L  P + RWYL  FG+ R+P EM L D+K RQ++         S+  G+ K
Sbjct: 155 RVSMKKVSLLGGPARSRWYLFAFGVGRYPMEMELSDIKTRQSKLTDSKMRQSSKAPGKSK 214

Query: 129 VSG--STTDAECKSRGRRLWGLLEVLVSVSHRYANTVVMAS 13
                   D     R R  W LL +L       AN +V AS
Sbjct: 215 ADDGREKLDGRGGKRARGWWSLLRIL-GCKGNQANAMVKAS 254


Top