BLASTX nr result

ID: Rauwolfia21_contig00048882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00048882
         (234 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360578.1| PREDICTED: beta-amylase-like [Solanum tubero...    75   7e-12
ref|XP_004243448.1| PREDICTED: beta-amylase-like [Solanum lycope...    75   7e-12
pdb|1Q6C|A Chain A, Crystal Structure Of Soybean Beta-Amylase Co...    75   1e-11
ref|NP_001236247.1| beta-amylase precursor [Glycine max] gi|2315...    75   1e-11
pdb|1BTC|A Chain A, Three-Dimensional Structure Of Soybean Beta-...    75   1e-11
gb|AAA33941.1| beta-amylase [Glycine max]                              75   1e-11
gb|AAZ38831.1| beta-amylase [Glycine max]                              75   1e-11
pdb|1V3H|A Chain A, The Roles Of Glu186 And Glu380 In The Cataly...    75   1e-11
pdb|1V3I|A Chain A, The Roles Of Glu186 And Glu380 In The Cataly...    75   1e-11
pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mu...    75   1e-11
pdb|1Q6E|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mu...    75   1e-11
pdb|1Q6D|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mu...    75   1e-11
pdb|1UKO|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mu...    75   1e-11
dbj|BAA09462.1| beta-amylase [Glycine max] gi|2196550|dbj|BAA204...    75   1e-11
pdb|1BYA|A Chain A, Crystal Structures Of Soybean Beta-Amylase R...    75   1e-11
pdb|2DQX|A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean           75   1e-11
dbj|BAD93288.1| beta-amylase [Glycine max]                             75   1e-11
dbj|BAD93289.1| beta-amylase [Glycine max]                             75   1e-11
dbj|BAD93290.1| beta-amylase [Glycine max]                             75   1e-11
gb|AAY40266.1| beta-amylase [Glycine max]                              74   3e-11

>ref|XP_006360578.1| PREDICTED: beta-amylase-like [Solanum tuberosum]
          Length = 578

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 35/42 (83%), Positives = 36/42 (85%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRH+   NFTCLEM NSEHPA AKSGPQELVQQV
Sbjct: 395 YRPIARMLSRHYGTFNFTCLEMRNSEHPAYAKSGPQELVQQV 436


>ref|XP_004243448.1| PREDICTED: beta-amylase-like [Solanum lycopersicum]
          Length = 575

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 35/42 (83%), Positives = 36/42 (85%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRH+   NFTCLEM NSEHPA AKSGPQELVQQV
Sbjct: 392 YRPIARMLSRHYGTFNFTCLEMRNSEHPAYAKSGPQELVQQV 433


>pdb|1Q6C|A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With
           Maltose gi|62738228|pdb|1WDP|A Chain A, The Role Of An
           Inner Loop In The Catalytic Mechanism Of Soybean
           Beta-Amylase gi|157830279|pdb|1BFN|A Chain A,
           Beta-AmylaseBETA-Cyclodextrin Complex
          Length = 495

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 325 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 366


>ref|NP_001236247.1| beta-amylase precursor [Glycine max]
           gi|231541|sp|P10538.3|AMYB_SOYBN RecName:
           Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan
           maltohydrolase gi|296447|emb|CAA50551.1| unnamed protein
           product [Glycine max]
          Length = 496

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 326 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 367


>pdb|1BTC|A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase
           Determined At 3.0 Angstroms Resolution: Preliminary
           Chain Tracing Of The Complex With Alpha-Cyclodextrin
          Length = 491

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 321 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 362


>gb|AAA33941.1| beta-amylase [Glycine max]
          Length = 474

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 326 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 367


>gb|AAZ38831.1| beta-amylase [Glycine max]
          Length = 496

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 326 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 367


>pdb|1V3H|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction
           Of Soybean Beta-Amylase
          Length = 495

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 325 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 366


>pdb|1V3I|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction
           Of Soybean Beta-Amylase
          Length = 495

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 325 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 366


>pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant
           Substituted At Surface Region gi|46015830|pdb|1UKP|B
           Chain B, Crystal Structure Of Soybean Beta-Amylase
           Mutant Substituted At Surface Region
           gi|46015831|pdb|1UKP|C Chain C, Crystal Structure Of
           Soybean Beta-Amylase Mutant Substituted At Surface
           Region gi|46015832|pdb|1UKP|D Chain D, Crystal Structure
           Of Soybean Beta-Amylase Mutant Substituted At Surface
           Region
          Length = 495

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 325 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 366


>pdb|1Q6E|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (E178y)
           With Increased Ph Optimum At Ph 5.4
           gi|46015335|pdb|1Q6F|A Chain A, Crystal Structure Of
           Soybean Beta-Amylase Mutant (E178y) With Increased Ph
           Optimum At Ph 7.1
          Length = 495

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 325 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 366


>pdb|1Q6D|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t)
           With Increased Ph Optimum
          Length = 495

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 325 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 366


>pdb|1UKO|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant
           Substituted At Surface Region gi|46015826|pdb|1UKO|B
           Chain B, Crystal Structure Of Soybean Beta-Amylase
           Mutant Substituted At Surface Region
           gi|46015827|pdb|1UKO|C Chain C, Crystal Structure Of
           Soybean Beta-Amylase Mutant Substituted At Surface
           Region gi|46015828|pdb|1UKO|D Chain D, Crystal Structure
           Of Soybean Beta-Amylase Mutant Substituted At Surface
           Region
          Length = 495

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 325 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 366


>dbj|BAA09462.1| beta-amylase [Glycine max] gi|2196550|dbj|BAA20453.1| beta-amylase
           [Glycine max] gi|71673373|gb|AAZ38832.1| beta-amylase
           [Glycine max]
          Length = 496

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 326 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 367


>pdb|1BYA|A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With
           Beta-Maltose And Maltal: Active Site Components And
           Their Apparent Role In Catalysis gi|157830497|pdb|1BYB|A
           Chain A, Crystal Structures Of Soybean Beta-Amylase
           Reacted With Beta-Maltose And Maltal: Active Site
           Components And Their Apparent Role In Catalysis
           gi|157830498|pdb|1BYC|A Chain A, Crystal Structures Of
           Soybean Beta-Amylase Reacted With Beta-Maltose And
           Maltal: Active Site Components And Their Apparent Role
           In Catalysis gi|157830499|pdb|1BYD|A Chain A, Crystal
           Structures Of Soybean Beta-Amylase Reacted With
           Beta-Maltose And Maltal: Active Site Components And
           Their Apparent Role In Catalysis
          Length = 495

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 325 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 366


>pdb|2DQX|A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean
          Length = 495

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 325 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 366


>dbj|BAD93288.1| beta-amylase [Glycine max]
          Length = 496

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 326 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 367


>dbj|BAD93289.1| beta-amylase [Glycine max]
          Length = 496

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 326 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 367


>dbj|BAD93290.1| beta-amylase [Glycine max]
          Length = 496

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIARM SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 326 YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 367


>gb|AAY40266.1| beta-amylase [Glycine max]
          Length = 496

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = -3

Query: 232 YRPIARMFSRHHACLNFTCLEMSNSEHPAAAKSGPQELVQQV 107
           YRPIAR+ SRHHA LNFTCLEM +SE P+ AKSGPQELVQQV
Sbjct: 326 YRPIARLLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 367


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