BLASTX nr result

ID: Rauwolfia21_contig00048787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00048787
         (234 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350829.1| PREDICTED: cell division control protein 6 h...    63   5e-08
ref|XP_004241172.1| PREDICTED: cell division control protein 6 h...    61   1e-07

>ref|XP_006350829.1| PREDICTED: cell division control protein 6 homolog [Solanum
           tuberosum]
          Length = 534

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
 Frame = +2

Query: 2   DNMSVISEIRDSTPQKRKLRSNSAG--KDSPDSSVLLP--MDCSPAKWKSPRRCVNDSPH 169
           D +++  EI DSTPQKRKLRS+S+   +DS  +S L P  +  SP+KWKSPRRCVNDSP 
Sbjct: 20  DPIAINGEI-DSTPQKRKLRSSSSSTTEDSRVTSDLTPSPLKSSPSKWKSPRRCVNDSPK 78

Query: 170 TSTPLKENEK--NLGNKVVK 223
           ++       K  NL    VK
Sbjct: 79  STPNANRGAKAVNLSKSPVK 98


>ref|XP_004241172.1| PREDICTED: cell division control protein 6 homolog [Solanum
           lycopersicum]
          Length = 532

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
 Frame = +2

Query: 14  VISEIRDSTPQKRKLRSNSAG--KDSPDSSVLLP--MDCSPAKWKSPRRCVNDSPHTSTP 181
           + SEI +STPQKRKLRS+S+   +DS  +S L P  +  SP+KWKSPRRCVNDSP ++  
Sbjct: 22  IASEI-ESTPQKRKLRSSSSSTTEDSRITSDLTPSPLKSSPSKWKSPRRCVNDSPKSTLN 80

Query: 182 LKENEK--NLGNKVVK 223
                K  NL    VK
Sbjct: 81  ANRGAKAVNLSKSPVK 96


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