BLASTX nr result
ID: Rauwolfia21_contig00048556
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00048556
(295 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein lig... 88 1e-15
ref|XP_004243102.1| PREDICTED: putative E3 ubiquitin-protein lig... 82 6e-14
gb|EOY30732.1| Transducin/WD40 repeat-like superfamily protein [... 82 1e-13
ref|XP_006584821.1| PREDICTED: putative E3 ubiquitin-protein lig... 80 4e-13
ref|XP_004155724.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ... 78 1e-12
ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein lig... 78 1e-12
ref|XP_006580471.1| PREDICTED: putative E3 ubiquitin-protein lig... 77 3e-12
ref|XP_004299991.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ... 76 5e-12
gb|EXB83506.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus... 74 2e-11
ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citr... 74 3e-11
emb|CBI28040.3| unnamed protein product [Vitis vinifera] 73 3e-11
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera] 73 3e-11
ref|XP_002325006.2| hypothetical protein POPTR_0018s09040g [Popu... 72 6e-11
gb|ESW32315.1| hypothetical protein PHAVU_002G311800g [Phaseolus... 72 8e-11
ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ric... 64 3e-08
ref|XP_003565524.1| PREDICTED: uncharacterized protein LOC100836... 59 9e-07
ref|XP_004971473.1| PREDICTED: putative E3 ubiquitin-protein lig... 56 4e-06
dbj|BAJ95654.1| predicted protein [Hordeum vulgare subsp. vulgare] 56 6e-06
>ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Solanum
tuberosum]
Length = 1284
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +1
Query: 1 GGLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAW 150
GG+VE WCKKKHN+VETLQTG N+KV+ MAL +NE+ LVIGTSDG+IQAW
Sbjct: 1232 GGIVEAWCKKKHNRVETLQTGINSKVVCMALDTNEETLVIGTSDGRIQAW 1281
>ref|XP_004243102.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Solanum
lycopersicum]
Length = 1384
Score = 82.4 bits (202), Expect = 6e-14
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 1 GGLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQ 144
GG+VE WCKKKHN+V+TLQTG N KV+SMAL +NE+ LVIGTSDG+IQ
Sbjct: 1324 GGIVEAWCKKKHNRVDTLQTGINGKVVSMALDTNEETLVIGTSDGRIQ 1371
>gb|EOY30732.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
Length = 1332
Score = 81.6 bits (200), Expect = 1e-13
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = +1
Query: 1 GGLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAWG 153
GG+VEVW +KKH ++E LQTGTN+KV+ M L +NE++LVIGTSDG+IQAWG
Sbjct: 1280 GGIVEVWDQKKHTRIEILQTGTNSKVLCMTLDANEEVLVIGTSDGRIQAWG 1330
>ref|XP_006584821.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Glycine
max]
Length = 1333
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +1
Query: 1 GGLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAWG 153
GG VE+W KKKH +V+TLQ GTN +V MAL SNE++LVIGTSDG+IQAWG
Sbjct: 1281 GGTVEIWDKKKHKRVDTLQMGTNCRVNCMALDSNEEVLVIGTSDGQIQAWG 1331
>ref|XP_004155724.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase
LIN-2-like [Cucumis sativus]
Length = 1230
Score = 77.8 bits (190), Expect = 1e-12
Identities = 31/51 (60%), Positives = 42/51 (82%)
Frame = +1
Query: 1 GGLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAWG 153
GG+VE+W ++KHNK++TLQ G N K++ MAL E++LVIGTSDG+IQ WG
Sbjct: 1179 GGMVEIWSREKHNKIDTLQMGRNCKIVCMALDEREEVLVIGTSDGRIQGWG 1229
>ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
sativus]
Length = 1336
Score = 77.8 bits (190), Expect = 1e-12
Identities = 31/51 (60%), Positives = 42/51 (82%)
Frame = +1
Query: 1 GGLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAWG 153
GG+VE+W ++KHNK++TLQ G N K++ MAL E++LVIGTSDG+IQ WG
Sbjct: 1285 GGMVEIWSREKHNKIDTLQMGRNCKIVCMALDEREEVLVIGTSDGRIQGWG 1335
>ref|XP_006580471.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Glycine
max]
Length = 1384
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = +1
Query: 1 GGLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAWG 153
GG +E+W KKKHN+V+TLQ GTN +V MAL N ++LVIGTSDG+IQAWG
Sbjct: 1332 GGTLEIWDKKKHNRVDTLQMGTNCRVNCMALDGNGEVLVIGTSDGQIQAWG 1382
>ref|XP_004299991.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase
LIN-like [Fragaria vesca subsp. vesca]
Length = 1266
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/52 (65%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
Frame = +1
Query: 1 GGLVEVWCKKKHNKV-ETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAWG 153
GG VE+W ++K NK+ +TLQTGTN KV+S+AL +NE++LV GTSDG+IQAWG
Sbjct: 1213 GGCVEIWDREKQNKIIDTLQTGTNCKVLSLALDANEEVLVTGTSDGRIQAWG 1264
>gb|EXB83506.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus notabilis]
Length = 1365
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/50 (62%), Positives = 42/50 (84%)
Frame = +1
Query: 4 GLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAWG 153
G VE+W ++K N+++TLQ GTN KVI MAL +NE++LV+GTSDG +QAWG
Sbjct: 1314 GAVEIWGREKQNRIDTLQIGTNCKVICMALDANEEVLVVGTSDGLLQAWG 1363
>ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citrus clementina]
gi|557554431|gb|ESR64445.1| hypothetical protein
CICLE_v10007255mg [Citrus clementina]
Length = 1380
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 1 GGLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAWG 153
GG VE+W +K+ ++ETLQTGT+ KV MAL NE+ LVIGTSDG+IQAWG
Sbjct: 1328 GGTVEIWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWG 1378
>emb|CBI28040.3| unnamed protein product [Vitis vinifera]
Length = 1154
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +1
Query: 4 GLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAW 150
G VE+WC+KK +VETLQTGTN KV MA+ +E++LV+GTSDG+IQAW
Sbjct: 1103 GTVEIWCRKKLIRVETLQTGTNGKVQCMAVDGDEEVLVVGTSDGRIQAW 1151
>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
Length = 1618
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +1
Query: 4 GLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAW 150
G VE+WC+KK +VETLQTGTN KV MA+ +E++LV+GTSDG+IQAW
Sbjct: 1567 GTVEIWCRKKLIRVETLQTGTNGKVQCMAVDGDEEVLVVGTSDGRIQAW 1615
>ref|XP_002325006.2| hypothetical protein POPTR_0018s09040g [Populus trichocarpa]
gi|550318362|gb|EEF03571.2| hypothetical protein
POPTR_0018s09040g [Populus trichocarpa]
Length = 991
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/51 (68%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Frame = +1
Query: 4 GLVEVWCKKKH-NKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAWG 153
G VE+W +KK N+VE LQTGTN KV+ MAL++NED+LVIGTS G+IQAWG
Sbjct: 939 GTVEIWDRKKQQNRVEILQTGTNDKVLCMALNANEDVLVIGTSTGQIQAWG 989
>gb|ESW32315.1| hypothetical protein PHAVU_002G311800g [Phaseolus vulgaris]
Length = 1334
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +1
Query: 1 GGLVEVWCKKKHNKVETLQTGTNAKVISMALSSNEDLLVIGTSDGKIQAW 150
GG VE+W KK +KV+TLQ GTN +V MAL SNE+ LVIGTSDG+IQAW
Sbjct: 1282 GGTVEIWDMKKLSKVDTLQMGTNCRVNCMALDSNEEFLVIGTSDGQIQAW 1331
>ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ricinus communis]
gi|223546727|gb|EEF48225.1| F-box and wd40 domain
protein, putative [Ricinus communis]
Length = 1268
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/49 (63%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 GGLVEVWCKKKHNKVETLQTGTN-AKVISMALSSNEDLLVIGTSDGKIQ 144
GG VE+W +KK + +ETLQTGT A+++ MAL SNE++LVIGTSDG+IQ
Sbjct: 1204 GGNVEIWDQKKLSIIETLQTGTEGARILCMALDSNEEMLVIGTSDGRIQ 1252
>ref|XP_003565524.1| PREDICTED: uncharacterized protein LOC100836629 [Brachypodium
distachyon]
Length = 1418
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = +1
Query: 4 GLVEVWCKKKHNKVETLQTG-TNAKVISMALSSNEDLLVIGTSDGKIQAWGST 159
G VE+W ++K K+ TLQ G T +V MA+ ++ D+LV+GTSDG+IQAWG T
Sbjct: 1366 GAVEIWSREKLIKIGTLQAGGTGCRVQCMAVDADGDVLVVGTSDGRIQAWGLT 1418
>ref|XP_004971473.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Setaria
italica]
Length = 1374
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +1
Query: 4 GLVEVWCKKKHNKVETLQTG-TNAKVISMALSSNEDLLVIGTSDGKIQAWGST 159
G VE+W ++K ++ TLQ G + +V MA+ + D+LV+GTSDG+IQAWG T
Sbjct: 1322 GAVEIWSREKLTRIGTLQAGGPSCRVQCMAVDGDGDVLVVGTSDGRIQAWGLT 1374
>dbj|BAJ95654.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1375
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +1
Query: 4 GLVEVWCKKKHNKVETLQTG-TNAKVISMALSSNEDLLVIGTSDGKIQAWGST 159
G VE+W ++K K+ LQ G +V MA+ ++ D+LV+GTSDGKIQAWG T
Sbjct: 1323 GAVEIWSREKLIKIGALQAGGAGCRVQCMAVDADGDVLVVGTSDGKIQAWGLT 1375