BLASTX nr result

ID: Rauwolfia21_contig00048373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00048373
         (241 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ25607.1| hypothetical protein PRUPE_ppa021166mg [Prunus pe...    75   1e-11
gb|EOY06100.1| Ubiquitin 4, putative isoform 1 [Theobroma cacao]...    69   8e-10
ref|XP_002305847.2| hypothetical protein POPTR_0004s09300g [Popu...    68   1e-09
ref|XP_006489698.1| PREDICTED: polyubiquitin-C-like isoform X2 [...    65   7e-09
ref|XP_006489697.1| PREDICTED: polyubiquitin-C-like isoform X1 [...    65   7e-09
ref|XP_006420267.1| hypothetical protein CICLE_v10006421mg [Citr...    64   2e-08
ref|XP_006344864.1| PREDICTED: polyubiquitin-like [Solanum tuber...    59   5e-07
gb|EMJ28502.1| hypothetical protein PRUPE_ppa016783mg, partial [...    55   7e-06

>gb|EMJ25607.1| hypothetical protein PRUPE_ppa021166mg [Prunus persica]
          Length = 296

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 32/76 (42%), Positives = 58/76 (76%)
 Frame = -3

Query: 233 QEIFFGGDWLQDDKKLVDCGIKQNSTLKIFVQNSEPLTLNIKIPSNKKVIAVQANIYDSI 54
           QE+F GGD L D + LVDCG++++ST+ + +QN+  + L +K+PS+++ I ++A  +D+I
Sbjct: 32  QELFLGGDMLVDCQSLVDCGVQRDSTVHLVLQNTVGIKLFVKLPSSQRTIEIEAKAHDTI 91

Query: 53  QDVKSLISAKQGIHSD 6
           +++K++I AK+ I SD
Sbjct: 92  RNIKAMIQAKKMIPSD 107


>gb|EOY06100.1| Ubiquitin 4, putative isoform 1 [Theobroma cacao]
           gi|508714204|gb|EOY06101.1| Ubiquitin 4, putative
           isoform 1 [Theobroma cacao] gi|508714205|gb|EOY06102.1|
           Ubiquitin 4, putative isoform 1 [Theobroma cacao]
          Length = 380

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 32/77 (41%), Positives = 53/77 (68%)
 Frame = -3

Query: 236 LQEIFFGGDWLQDDKKLVDCGIKQNSTLKIFVQNSEPLTLNIKIPSNKKVIAVQANIYDS 57
           +Q++F+ G  L+D ++LVD GI +NSTL + +Q+   + L +KIPS ++ I V+A   ++
Sbjct: 55  IQDLFYAGQLLKDGERLVDHGIMRNSTLHLVLQDFIGVKLFVKIPSEQRTILVEARANET 114

Query: 56  IQDVKSLISAKQGIHSD 6
           +Q +KSLI   +GI SD
Sbjct: 115 VQSIKSLIQVTEGIESD 131


>ref|XP_002305847.2| hypothetical protein POPTR_0004s09300g [Populus trichocarpa]
           gi|550340656|gb|EEE86358.2| hypothetical protein
           POPTR_0004s09300g [Populus trichocarpa]
          Length = 388

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 31/73 (42%), Positives = 53/73 (72%)
 Frame = -3

Query: 233 QEIFFGGDWLQDDKKLVDCGIKQNSTLKIFVQNSEPLTLNIKIPSNKKVIAVQANIYDSI 54
           QE+FF GD L+DD+++VD GI +++TL + +Q+S  + L + IPS +K + V+A  YD++
Sbjct: 58  QELFFNGDRLKDDQRVVDYGIPKDATLHMILQSSVGVKLLVVIPSRQKSVVVEARTYDTV 117

Query: 53  QDVKSLISAKQGI 15
           Q +K++I  K+ I
Sbjct: 118 QKIKAVILEKEQI 130


>ref|XP_006489698.1| PREDICTED: polyubiquitin-C-like isoform X2 [Citrus sinensis]
          Length = 426

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 33/75 (44%), Positives = 49/75 (65%)
 Frame = -3

Query: 230 EIFFGGDWLQDDKKLVDCGIKQNSTLKIFVQNSEPLTLNIKIPSNKKVIAVQANIYDSIQ 51
           ++FF GD L+  + LVD GI+ NSTL    QN   + L +KIP+N+    V+A  Y ++Q
Sbjct: 28  DLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQ 86

Query: 50  DVKSLISAKQGIHSD 6
           ++KS+I  K+GI SD
Sbjct: 87  NIKSMIQVKEGIQSD 101


>ref|XP_006489697.1| PREDICTED: polyubiquitin-C-like isoform X1 [Citrus sinensis]
          Length = 457

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 33/75 (44%), Positives = 49/75 (65%)
 Frame = -3

Query: 230 EIFFGGDWLQDDKKLVDCGIKQNSTLKIFVQNSEPLTLNIKIPSNKKVIAVQANIYDSIQ 51
           ++FF GD L+  + LVD GI+ NSTL    QN   + L +KIP+N+    V+A  Y ++Q
Sbjct: 59  DLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQ 117

Query: 50  DVKSLISAKQGIHSD 6
           ++KS+I  K+GI SD
Sbjct: 118 NIKSMIQVKEGIQSD 132


>ref|XP_006420267.1| hypothetical protein CICLE_v10006421mg [Citrus clementina]
           gi|557522140|gb|ESR33507.1| hypothetical protein
           CICLE_v10006421mg [Citrus clementina]
          Length = 426

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/75 (42%), Positives = 49/75 (65%)
 Frame = -3

Query: 230 EIFFGGDWLQDDKKLVDCGIKQNSTLKIFVQNSEPLTLNIKIPSNKKVIAVQANIYDSIQ 51
           ++FF GD L+  + LVD GI+ NSTL    QN   + L +KIP+N+    V+A  Y ++Q
Sbjct: 28  DLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQ 86

Query: 50  DVKSLISAKQGIHSD 6
           ++K++I  K+GI SD
Sbjct: 87  NIKTMIQVKEGIQSD 101


>ref|XP_006344864.1| PREDICTED: polyubiquitin-like [Solanum tuberosum]
          Length = 134

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -3

Query: 239 CLQEIFFGGDWLQDDK-KLVDCGIKQNSTLKIFVQNSEPLTLNIKIPSNKKVIAVQANIY 63
           CLQ++F     L DD+ KL+DCGI +NSTL  ++ NS P    +K P     I V +  +
Sbjct: 56  CLQQLFSKDVRLTDDEQKLMDCGIIENSTLHAYIDNSVPKVFLVKRPHANVTITVYSRTF 115

Query: 62  DSIQDVKSLISAK 24
           D+IQDVK  I  K
Sbjct: 116 DTIQDVKCRIGVK 128


>gb|EMJ28502.1| hypothetical protein PRUPE_ppa016783mg, partial [Prunus persica]
          Length = 351

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/69 (40%), Positives = 42/69 (60%)
 Frame = -3

Query: 212 DWLQDDKKLVDCGIKQNSTLKIFVQNSEPLTLNIKIPSNKKVIAVQANIYDSIQDVKSLI 33
           +WL D +   D GI++  +  I  QNS  + + +KIPSN+K I  +A  Y +I D+KS+I
Sbjct: 40  NWLHDGQIPADQGIQREPSYHIRHQNSMRMKIYVKIPSNQKTIVFEAKGYYTINDIKSMI 99

Query: 32  SAKQGIHSD 6
             K+GI  D
Sbjct: 100 QLKEGIQLD 108


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