BLASTX nr result
ID: Rauwolfia21_contig00048317
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00048317
(238 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
gb|EOY30922.1| Tetratricopeptide repeat (TPR)-like superfamily p... 94 2e-17
emb|CBI28135.3| unnamed protein product [Vitis vinifera] 92 9e-17
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi... 92 9e-17
gb|EOY30923.1| Tetratricopeptide repeat (TPR)-like superfamily p... 90 4e-16
ref|XP_006352207.1| PREDICTED: pentatricopeptide repeat-containi... 86 4e-15
ref|XP_006475767.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_006475766.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_006451033.1| hypothetical protein CICLE_v10010814mg, part... 84 3e-14
gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiol... 84 3e-14
gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiol... 84 3e-14
gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiol... 83 3e-14
gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihim... 82 6e-14
ref|NP_200385.1| pentatricopeptide repeat-containing protein CRR... 81 2e-13
ref|XP_006401418.1| hypothetical protein EUTSA_v10012692mg [Eutr... 81 2e-13
ref|XP_006280016.1| hypothetical protein CARUB_v10025890mg [Caps... 81 2e-13
gb|AEP33742.1| chlororespiratory reduction 21 [Barbarea verna] 81 2e-13
gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella... 81 2e-13
ref|XP_002866111.1| pentatricopeptide repeat-containing protein ... 81 2e-13
ref|XP_004244817.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
>ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = -3
Query: 233 YEHPLFANFPENAKSNPVLYKSYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGE 54
Y FA+F + A + + YKSYL H+SSLCK G L EA+D +T +E E++ IGPD+YGE
Sbjct: 24 YSPTHFASFSQIASNVQISYKSYLNHISSLCKQGHLLEALDLVTDLELEDITIGPDVYGE 83
Query: 53 LLQGCVYERDLFLGQQ 6
LLQGCVYER L LGQQ
Sbjct: 84 LLQGCVYERALSLGQQ 99
>gb|EOY30922.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao]
Length = 836
Score = 93.6 bits (231), Expect = 2e-17
Identities = 41/71 (57%), Positives = 54/71 (76%)
Frame = -3
Query: 218 FANFPENAKSNPVLYKSYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGC 39
F F +++ L KSY +SSLCKDGQ+Q+AVD +T+M+ +N +GP+IYGE+LQGC
Sbjct: 31 FTEFNGTTRNHRTLSKSYFHSISSLCKDGQIQQAVDLLTEMDSKNFPVGPEIYGEILQGC 90
Query: 38 VYERDLFLGQQ 6
VYERDLF GQQ
Sbjct: 91 VYERDLFTGQQ 101
>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = -3
Query: 215 ANFPENAKSNPVLYKSYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCV 36
A E ++ LYKSY H+SSLCKDG LQE+V +++ME+E+ IGP+IYGELLQGCV
Sbjct: 1126 AKLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCV 1185
Query: 35 YERDLFLGQQ 6
YER L GQQ
Sbjct: 1186 YERALHTGQQ 1195
>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = -3
Query: 215 ANFPENAKSNPVLYKSYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCV 36
A E ++ LYKSY H+SSLCKDG LQE+V +++ME+E+ IGP+IYGELLQGCV
Sbjct: 31 AKLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCV 90
Query: 35 YERDLFLGQQ 6
YER L GQQ
Sbjct: 91 YERALHTGQQ 100
>gb|EOY30923.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 2 [Theobroma cacao]
Length = 779
Score = 89.7 bits (221), Expect = 4e-16
Identities = 39/69 (56%), Positives = 52/69 (75%)
Frame = -3
Query: 218 FANFPENAKSNPVLYKSYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGC 39
F F +++ L KSY +SSLCKDGQ+Q+AVD +T+M+ +N +GP+IYGE+LQGC
Sbjct: 31 FTEFNGTTRNHRTLSKSYFHSISSLCKDGQIQQAVDLLTEMDSKNFPVGPEIYGEILQGC 90
Query: 38 VYERDLFLG 12
VYERDLF G
Sbjct: 91 VYERDLFTG 99
>ref|XP_006352207.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Solanum tuberosum]
Length = 844
Score = 86.3 bits (212), Expect = 4e-15
Identities = 41/72 (56%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = -3
Query: 218 FANFPENAKSNPVLYKS-YLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQG 42
F ++ E+ + L KS Y K + SLCK+G+LQEAVDF+ +MEY NL++GP+ YGELLQG
Sbjct: 33 FISYQEDGTNEKFLNKSHYFKLLGSLCKEGKLQEAVDFLKEMEYGNLYVGPEFYGELLQG 92
Query: 41 CVYERDLFLGQQ 6
CVYER+ LG+Q
Sbjct: 93 CVYERNQKLGKQ 104
>ref|XP_006475767.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 622
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/66 (57%), Positives = 50/66 (75%)
Frame = -3
Query: 203 ENAKSNPVLYKSYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERD 24
E+ S LYKSY +SSL K+ Q++EAVD +T+M+ N IGP+IYGELLQGCVY+RD
Sbjct: 35 ESDNSYESLYKSYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRD 94
Query: 23 LFLGQQ 6
++ GQQ
Sbjct: 95 MYTGQQ 100
>ref|XP_006475766.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 840
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/66 (57%), Positives = 50/66 (75%)
Frame = -3
Query: 203 ENAKSNPVLYKSYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERD 24
E+ S LYKSY +SSL K+ Q++EAVD +T+M+ N IGP+IYGELLQGCVY+RD
Sbjct: 35 ESDNSYESLYKSYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRD 94
Query: 23 LFLGQQ 6
++ GQQ
Sbjct: 95 MYTGQQ 100
>ref|XP_006451033.1| hypothetical protein CICLE_v10010814mg, partial [Citrus clementina]
gi|557554259|gb|ESR64273.1| hypothetical protein
CICLE_v10010814mg, partial [Citrus clementina]
Length = 830
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/66 (57%), Positives = 50/66 (75%)
Frame = -3
Query: 203 ENAKSNPVLYKSYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERD 24
E+ S LYKSY +SSL K+ Q++EAVD +T+M+ N IGP+IYGELLQGCVY+RD
Sbjct: 35 ESDNSYESLYKSYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRD 94
Query: 23 LFLGQQ 6
++ GQQ
Sbjct: 95 MYTGQQ 100
>gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 83.6 bits (205), Expect = 3e-14
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = -3
Query: 179 LYKSYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERDLFLGQQ 6
L SY VSSLCK+G+++EA+ +T+M+Y N+ IGP+IYGE+LQGCVYERDL GQQ
Sbjct: 10 LSTSYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQ 67
>gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
Length = 784
Score = 83.6 bits (205), Expect = 3e-14
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = -3
Query: 179 LYKSYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERDLFLGQQ 6
L SY VSSLCK+G+++EA+ +T+M+Y N+ IGP+IYGE+LQGCVYERDL GQQ
Sbjct: 11 LSTSYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQ 68
>gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
Length = 794
Score = 83.2 bits (204), Expect = 3e-14
Identities = 35/55 (63%), Positives = 46/55 (83%)
Frame = -3
Query: 170 SYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERDLFLGQQ 6
SY VSSLCK+G+++EA+ +T+M+Y N+ IGP+IYGE+LQGCVYERDL GQQ
Sbjct: 1 SYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQ 55
>gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
Length = 830
Score = 82.4 bits (202), Expect = 6e-14
Identities = 35/55 (63%), Positives = 46/55 (83%)
Frame = -3
Query: 170 SYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERDLFLGQQ 6
SY VSSLCK+G+++EA+ +TKM++ NL IGP+IYGE+LQGCVYERDL G+Q
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTKMDFRNLRIGPEIYGEILQGCVYERDLCTGKQ 91
>ref|NP_200385.1| pentatricopeptide repeat-containing protein CRR21 [Arabidopsis
thaliana] gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g55740, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
gi|9758608|dbj|BAB09241.1| selenium-binding protein-like
[Arabidopsis thaliana] gi|332009292|gb|AED96675.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 830
Score = 80.9 bits (198), Expect = 2e-13
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = -3
Query: 170 SYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERDLFLGQQ 6
SY VSSLCK+G+++EA+ +T+M++ NL IGP+IYGE+LQGCVYERDL G+Q
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
>ref|XP_006401418.1| hypothetical protein EUTSA_v10012692mg [Eutrema salsugineum]
gi|557102508|gb|ESQ42871.1| hypothetical protein
EUTSA_v10012692mg [Eutrema salsugineum]
Length = 832
Score = 80.9 bits (198), Expect = 2e-13
Identities = 34/55 (61%), Positives = 45/55 (81%)
Frame = -3
Query: 170 SYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERDLFLGQQ 6
SY VSSLCK+G+++EA+ +T+M++ NL IGP+IYGE+LQGCVYERD GQQ
Sbjct: 36 SYFHSVSSLCKNGEIREALSLVTEMDFRNLRIGPEIYGEILQGCVYERDFHTGQQ 90
>ref|XP_006280016.1| hypothetical protein CARUB_v10025890mg [Capsella rubella]
gi|482548720|gb|EOA12914.1| hypothetical protein
CARUB_v10025890mg [Capsella rubella]
Length = 830
Score = 80.9 bits (198), Expect = 2e-13
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = -3
Query: 170 SYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERDLFLGQQ 6
SY VSSLCK+G+++EA+ +T+M++ NL IGP+IYGE+LQGCVYERDL G+Q
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQ 91
>gb|AEP33742.1| chlororespiratory reduction 21 [Barbarea verna]
Length = 607
Score = 80.9 bits (198), Expect = 2e-13
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = -3
Query: 170 SYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERDLFLGQQ 6
SY VSSLCK+G+++EA+ +T+M++ NL IGP+IYGE+LQGCVYERDL G+Q
Sbjct: 31 SYFHRVSSLCKNGEIREALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQ 85
>gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
Length = 820
Score = 80.9 bits (198), Expect = 2e-13
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = -3
Query: 170 SYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERDLFLGQQ 6
SY VSSLCK+G+++EA+ +T+M++ NL IGP+IYGE+LQGCVYERDL G+Q
Sbjct: 26 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQ 80
>ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297311946|gb|EFH42370.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 829
Score = 80.9 bits (198), Expect = 2e-13
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = -3
Query: 170 SYLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERDLFLGQQ 6
SY VSSLCK+G+++EA+ +T+M++ NL IGP+IYGE+LQGCVYERDL G+Q
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQ 91
>ref|XP_004244817.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Solanum lycopersicum]
Length = 839
Score = 79.7 bits (195), Expect = 4e-13
Identities = 35/54 (64%), Positives = 45/54 (83%)
Frame = -3
Query: 167 YLKHVSSLCKDGQLQEAVDFITKMEYENLHIGPDIYGELLQGCVYERDLFLGQQ 6
Y K + SLCK+ +LQEAVDF+ +MEY NL++GP+ YGELLQGCVYER+ LG+Q
Sbjct: 46 YFKLLGSLCKESKLQEAVDFLKEMEYGNLYVGPEFYGELLQGCVYERNQKLGKQ 99