BLASTX nr result
ID: Rauwolfia21_contig00048176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00048176
(424 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531110.1| conserved hypothetical protein [Ricinus comm... 74 1e-19
emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera] 61 2e-14
ref|XP_006363394.1| PREDICTED: RING-H2 finger protein ATL1-like ... 74 2e-11
ref|XP_004295948.1| PREDICTED: RING-H2 finger protein ATL52-like... 68 1e-09
gb|EXC35066.1| RING-H2 finger protein ATL16 [Morus notabilis] 67 2e-09
gb|EOY34153.1| RING/U-box superfamily protein, putative [Theobro... 67 3e-09
ref|XP_006595461.1| PREDICTED: RING-H2 finger protein ATL54-like... 50 3e-08
gb|EMJ08982.1| hypothetical protein PRUPE_ppa026068mg, partial [... 63 5e-08
ref|XP_006369507.1| hypothetical protein POPTR_0001s24180g, part... 43 6e-07
>ref|XP_002531110.1| conserved hypothetical protein [Ricinus communis]
gi|223529306|gb|EEF31275.1| conserved hypothetical
protein [Ricinus communis]
Length = 199
Score = 74.3 bits (181), Expect(2) = 1e-19
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = -2
Query: 423 PAQSQHLNENNLDSPSLQFQSRGLDSFVMHSLPITQIKKIREEELCQGNTDCAVCLGEFE 244
P Q + LNE+N+ SLQ S GL+S +MHSLPITQ K +EEE N +CAVCLGE+E
Sbjct: 41 PVQMRRLNESNIQDSSLQIHSHGLESTIMHSLPITQFKNKKEEEPRVSNNECAVCLGEYE 100
Query: 243 D 241
+
Sbjct: 101 E 101
Score = 47.4 bits (111), Expect(2) = 1e-19
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = -1
Query: 238 CPLCRSSVCNLTMDQYSLSIYALLEALGREETHQETAEQFSVLRPQILQSSALTTETQVA 59
CPLCRS V +L+ +YS+SI LLE RE+ E++E + +LR +IL +S E A
Sbjct: 130 CPLCRSHVYDLS-HEYSMSINILLETPRREDFFHESSEDYQILRAEILCNSMFRPEEIGA 188
Query: 58 SDVTR 44
TR
Sbjct: 189 EVSTR 193
>emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera]
Length = 209
Score = 60.8 bits (146), Expect(2) = 2e-14
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = -2
Query: 390 LDSPSLQFQSRGLDSFVMHSLPITQIKKIREEELCQGNTDCAVCLGEFED 241
L+ PS QF SRGLDS ++SLPI Q KK E NTDCAVCLGEFE+
Sbjct: 22 LNDPSQQFHSRGLDSSTVYSLPIAQFKK--NEGPSHSNTDCAVCLGEFEE 69
Score = 43.5 bits (101), Expect(2) = 2e-14
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = -1
Query: 238 CPLCRSSVCNLTMD-QYSLSIYALLEALGREETHQETAEQF 119
CPLCRS V + TMD ++S S+Y LLE L RE+ QE ++F
Sbjct: 98 CPLCRSHVYDFTMDNEFSGSMYTLLETLRREDFFQEWIQRF 138
>ref|XP_006363394.1| PREDICTED: RING-H2 finger protein ATL1-like [Solanum tuberosum]
Length = 197
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Frame = -2
Query: 423 PAQSQHLNENNLDSPSLQFQSRGLDSFVMHSLPITQIKKIREEELCQGNTDCAVCLGEFE 244
P Q LN++ L+ Q QSRGLDS++MHSLPITQ KK E+ N+DCAVCLGEF+
Sbjct: 55 PIQRHQLNDHILEDHDSQLQSRGLDSYIMHSLPITQFKKNDEQTTRPNNSDCAVCLGEFQ 114
Query: 243 DA--------VRSADHLSVISQWINI 190
+ H++ I W I
Sbjct: 115 EGEWLKHLPYCSHVFHVACIDTWFQI 140
>ref|XP_004295948.1| PREDICTED: RING-H2 finger protein ATL52-like [Fragaria vesca subsp.
vesca]
Length = 201
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/80 (50%), Positives = 45/80 (56%), Gaps = 11/80 (13%)
Frame = -2
Query: 405 LNENNLDSPSLQFQSRGLDSFVMHSLPITQIKKIREEELC---QGNTDCAVCLGEFED-- 241
LNE N D SL +QS+GLD V+ SLPITQ KK E E Q NTDC VCLGEFE+
Sbjct: 56 LNETNADDASLLYQSQGLDFAVIRSLPITQFKKKSEAEDAEDNQSNTDCPVCLGEFEEEE 115
Query: 240 ------AVRSADHLSVISQW 199
A H+S I W
Sbjct: 116 WLRHLPKCNHAFHISCIDTW 135
>gb|EXC35066.1| RING-H2 finger protein ATL16 [Morus notabilis]
Length = 196
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 9/80 (11%)
Frame = -2
Query: 411 QHLNENNLDSPSLQFQSRGLDSFVMHSLPITQIKKIREEELCQ-GNTDCAVCLGEFED-- 241
Q L+E+N D PSL+F S GL+ MHSLPITQ K+ E E+ + +TDCAVCLGEF++
Sbjct: 48 QLLDESNTDDPSLRFDSHGLEFSTMHSLPITQFKEESEGEMNKTRSTDCAVCLGEFKEGE 107
Query: 240 ------AVRSADHLSVISQW 199
+ + H+S I W
Sbjct: 108 WLRHLPSCSHSFHISCIDTW 127
>gb|EOY34153.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 210
Score = 66.6 bits (161), Expect = 3e-09
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Frame = -2
Query: 417 QSQHLNENNLDSPSLQFQSRGLDSFVMHSLPITQIKKIREEELCQGNTDCAVCLGEFEDA 238
Q + L++ + D P Q QS ++S V+HSLPI+Q KK +EE NTDCAVCLGEFE+
Sbjct: 60 QRRLLDDGDFDPPPSQNQSNAMESTVIHSLPISQYKKENKEEPQPSNTDCAVCLGEFEEG 119
Query: 237 --------VRSADHLSVISQW 199
A H+S I W
Sbjct: 120 DLLRHLPNCTHAFHISCIDTW 140
>ref|XP_006595461.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
Length = 164
Score = 50.4 bits (119), Expect(2) = 3e-08
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -2
Query: 417 QSQHLNENNLDSPSLQFQSRGLDSFVMHSLPITQIKKIR-EEELCQGNTDCAVCLGEFED 241
+ Q + E + S+QF S L+S V++SLP++Q KK E E N DCA+CLGEFE+
Sbjct: 22 EGQFVEETIPNEYSIQFPSVNLESCVINSLPVSQFKKDEVEGEHMPVNADCAICLGEFEE 81
Score = 33.1 bits (74), Expect(2) = 3e-08
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 238 CPLCRSSVCNLTMDQYSLSIYALLEALGREETHQETAEQF 119
CPLCR+ V + + S+S+Y LLE ++ ET F
Sbjct: 110 CPLCRAYVSHADTQECSVSLYTLLETSRSQDFSTETTAYF 149
>gb|EMJ08982.1| hypothetical protein PRUPE_ppa026068mg, partial [Prunus persica]
Length = 118
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/51 (62%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = -2
Query: 387 DSPSLQFQSRGLDSFVMHSLPITQIKKIREEELC---QGNTDCAVCLGEFE 244
+ PSLQFQSRGLD V SLP+TQ KK E E Q N DCA+CLGEFE
Sbjct: 32 NDPSLQFQSRGLDFSVKRSLPVTQFKKKDEAEAAEHSQSNADCAICLGEFE 82
>ref|XP_006369507.1| hypothetical protein POPTR_0001s24180g, partial [Populus
trichocarpa] gi|550348067|gb|ERP66076.1| hypothetical
protein POPTR_0001s24180g, partial [Populus trichocarpa]
Length = 111
Score = 42.7 bits (99), Expect(2) = 6e-07
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = -2
Query: 357 GLDSFVMHSLPITQIKKIREEELCQGNTDCAVCLGEFED 241
GL+ + +LPI Q +K +EE N +CAVCLGEF++
Sbjct: 3 GLEPSMTRALPIAQFEKKNKEESSPSNNECAVCLGEFQE 41
Score = 36.2 bits (82), Expect(2) = 6e-07
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = -1
Query: 238 CPLCRSSVCNLTMDQYSLSIYALLEALGREETHQETAEQFSVLRPQILQSSAL 80
CPLCRS V NL + REE QE + VLR QILQ+ AL
Sbjct: 70 CPLCRSHVFNLNIPT-------------REELSQEREANYLVLRSQILQNLAL 109