BLASTX nr result

ID: Rauwolfia21_contig00048081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00048081
         (391 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348819.1| PREDICTED: reticulon-like protein B17-like [...    84   2e-14
ref|XP_004243816.1| PREDICTED: reticulon-like protein B17-like [...    81   2e-13
ref|XP_006372740.1| reticulon family protein [Populus trichocarp...    55   1e-05
ref|XP_006372739.1| hypothetical protein POPTR_0017s04610g [Popu...    55   1e-05
ref|XP_002328044.1| predicted protein [Populus trichocarpa]            55   1e-05

>ref|XP_006348819.1| PREDICTED: reticulon-like protein B17-like [Solanum tuberosum]
          Length = 418

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 46/92 (50%), Positives = 58/92 (63%)
 Frame = +3

Query: 114 MDSTPPYHKSEPRNRTKSASRLSKLRYYNEENEVVTPNLSLEIXXXXXXXXXXXXXXXXX 293
           MD+TPP H+SE R+RTKSASRLS+LR Y+EE+E +TP +SLEI                 
Sbjct: 1   MDTTPPSHRSETRSRTKSASRLSRLRRYDEESESLTPRVSLEIVPSPRIEVSPYGN---- 56

Query: 294 YGLPVHEXXXXXXXXXRKSKARLADRLEMSDD 389
            GLP+HE         R+SK RLAD+LE+ DD
Sbjct: 57  -GLPLHELLLLSPSPLRRSKTRLADKLELVDD 87


>ref|XP_004243816.1| PREDICTED: reticulon-like protein B17-like [Solanum lycopersicum]
          Length = 415

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
 Frame = +3

Query: 114 MDSTPPYHKSEPRNRTKSASRLSKLRYYNEENEVVTPNLSLEIXXXXXXXXXXXXXXXXX 293
           MD+TPP H+SE R+RTKSASRLS+LR Y+EE+E  TP +SLEI                 
Sbjct: 1   MDTTPPSHRSETRSRTKSASRLSRLRRYDEESESPTPRVSLEI-------VPSPRIEVSP 53

Query: 294 YG--LPVHEXXXXXXXXXRKSKARLADRLEMSDD 389
           YG  LP+HE         R+SK RLAD+LE+ DD
Sbjct: 54  YGNALPLHELLLLSPSPLRRSKTRLADKLELVDD 87


>ref|XP_006372740.1| reticulon family protein [Populus trichocarpa]
           gi|550319388|gb|ERP50537.1| reticulon family protein
           [Populus trichocarpa]
          Length = 439

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +3

Query: 114 MDSTPPYHKSEPRNRTKSASRLSKLRYYNEENEVVTPNLSLE-IXXXXXXXXXXXXXXXX 290
           MD+TPP H+S P ++ KSASRLS++  Y+ E E   P LSL+ I                
Sbjct: 1   MDTTPPSHRSNPNSQAKSASRLSRIT-YSIEPEAKPPQLSLDLIPSSEKKTPSSLSLKSS 59

Query: 291 XYGLPVHEXXXXXXXXXRKSKARLADRLEMSDD 389
              LP+ E         RKS+ RL DR EM ++
Sbjct: 60  TNSLPLQEQLLLSPSPLRKSRNRLVDRYEMPEE 92


>ref|XP_006372739.1| hypothetical protein POPTR_0017s04610g [Populus trichocarpa]
           gi|550319387|gb|ERP50536.1| hypothetical protein
           POPTR_0017s04610g [Populus trichocarpa]
          Length = 356

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +3

Query: 114 MDSTPPYHKSEPRNRTKSASRLSKLRYYNEENEVVTPNLSLE-IXXXXXXXXXXXXXXXX 290
           MD+TPP H+S P ++ KSASRLS++  Y+ E E   P LSL+ I                
Sbjct: 1   MDTTPPSHRSNPNSQAKSASRLSRIT-YSIEPEAKPPQLSLDLIPSSEKKTPSSLSLKSS 59

Query: 291 XYGLPVHEXXXXXXXXXRKSKARLADRLEMSDD 389
              LP+ E         RKS+ RL DR EM ++
Sbjct: 60  TNSLPLQEQLLLSPSPLRKSRNRLVDRYEMPEE 92


>ref|XP_002328044.1| predicted protein [Populus trichocarpa]
          Length = 404

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +3

Query: 114 MDSTPPYHKSEPRNRTKSASRLSKLRYYNEENEVVTPNLSLE-IXXXXXXXXXXXXXXXX 290
           MD+TPP H+S P ++ KSASRLS++  Y+ E E   P LSL+ I                
Sbjct: 1   MDTTPPSHRSNPNSQAKSASRLSRIT-YSIEPEAKPPQLSLDLIPSSEKKTPSSLSLKSS 59

Query: 291 XYGLPVHEXXXXXXXXXRKSKARLADRLEMSDD 389
              LP+ E         RKS+ RL DR EM ++
Sbjct: 60  TNSLPLQEQLLLSPSPLRKSRNRLVDRYEMPEE 92


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