BLASTX nr result

ID: Rauwolfia21_contig00047388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00047388
         (508 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004295495.1| PREDICTED: uncharacterized protein LOC101304...    60   2e-07
ref|XP_006374389.1| hypothetical protein POPTR_0015s06730g, part...    55   1e-05

>ref|XP_004295495.1| PREDICTED: uncharacterized protein LOC101304264 [Fragaria vesca
           subsp. vesca]
          Length = 465

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
 Frame = +3

Query: 228 SVLRCILSSPTQQGEDWGXXXXXXXLVNV---TWKLNIDGGSSCVNVVSETTIEKVKLTI 398
           SV+R IL++P  + EDW        LV       KL IDGGS C+NVVS +T+E++KL  
Sbjct: 386 SVVRRILAAPKVEEEDWRRTAIFQMLVRCGDKAHKLIIDGGS-CMNVVSSSTVERLKLPT 444

Query: 399 ELHLEL*KVVWINGTFIPVTK 461
           + H +  +V WI+ T IPVT+
Sbjct: 445 QPHPQPYRVAWIDSTQIPVTQ 465


>ref|XP_006374389.1| hypothetical protein POPTR_0015s06730g, partial [Populus
           trichocarpa] gi|550322151|gb|ERP52186.1| hypothetical
           protein POPTR_0015s06730g, partial [Populus trichocarpa]
          Length = 180

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = +3

Query: 231 VLRCILSSPTQQGEDWGXXXXXXXLVNVTWKLNIDGGSSCVNVVSETTIEKVKLTIELHL 410
           V+RCIL++     EDW        L     KL IDGGS C+NVVS  T+ +VKL  + H 
Sbjct: 103 VVRCILATHKHGKEDWRTTAIFQMLGKELHKLVIDGGS-CMNVVSAPTVGRVKLPAKPHP 161

Query: 411 EL*KVVWINGTFIPVTK 461
           +  +V WI+ T I VT+
Sbjct: 162 QPYQVAWIDNTIILVTE 178


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