BLASTX nr result

ID: Rauwolfia21_contig00047196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00047196
         (548 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70340.1| hypothetical protein VITISV_011440 [Vitis vinifera]    60   3e-07

>emb|CAN70340.1| hypothetical protein VITISV_011440 [Vitis vinifera]
          Length = 110

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
 Frame = +3

Query: 105 MVCLG-FIFGCK-PSSATSYMLSALVVVGILAGLRVLWCAVYRLLHNEETTGYGSESSDH 278
           MVC+G  IFGCK P SA +Y LSALVV+ I+ GLR+L   +YRLL+++     G    DH
Sbjct: 1   MVCIGGLIFGCKRPHSAAAYFLSALVVISIVVGLRILCYTIYRLLNSDHQQPPG----DH 56

Query: 279 VIEMXXXXXXXXXXXXXXXXRELPESKLVILAGD 380
             +                 R  P++K V L GD
Sbjct: 57  HHQSTSHDGVEMQANRFCSRRASPDTKFVALGGD 90


Top