BLASTX nr result

ID: Rauwolfia21_contig00047179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00047179
         (272 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006371305.1| hypothetical protein POPTR_0019s08910g [Popu...   119   4e-25
gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP bindin...   119   4e-25
gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP bindin...   119   4e-25
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...   119   4e-25
gb|AFU82534.1| DNA-dependent ATPase, partial [Artemisia tridentata]   117   2e-24
ref|XP_004490508.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   116   4e-24
ref|XP_006356480.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   115   6e-24
ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat...   115   6e-24
ref|XP_004252490.1| PREDICTED: uncharacterized protein LOC101252...   115   8e-24
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   113   3e-23
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              113   3e-23
ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   112   4e-23
ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   112   4e-23
gb|EMJ21511.1| hypothetical protein PRUPE_ppa000129mg [Prunus pe...   111   9e-23
ref|XP_006435949.1| hypothetical protein CICLE_v10030489mg [Citr...   110   2e-22
ref|XP_006435948.1| hypothetical protein CICLE_v10030489mg [Citr...   110   2e-22
ref|XP_006575381.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   108   6e-22
ref|XP_006575379.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   108   6e-22
ref|XP_004235225.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   108   6e-22
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   108   7e-22

>ref|XP_006371305.1| hypothetical protein POPTR_0019s08910g [Populus trichocarpa]
           gi|550317057|gb|ERP49102.1| hypothetical protein
           POPTR_0019s08910g [Populus trichocarpa]
          Length = 1680

 Score =  119 bits (298), Expect = 4e-25
 Identities = 58/90 (64%), Positives = 72/90 (80%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           AWLRPEVMTSEARY ++ +T+M  + +A   DD S  + KRAQFDV+G YEAI+PSK  P
Sbjct: 224 AWLRPEVMTSEARYRHAKSTEMEVNMAAEIGDDTS-NSGKRAQFDVAGLYEAIKPSKSDP 282

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREKG 3
           ML+D  P+LLP LRPYQRRAA+WM+Q+EKG
Sbjct: 283 MLEDDLPDLLPTLRPYQRRAAHWMVQQEKG 312


>gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
           binding isoform 2 [Theobroma cacao]
          Length = 1666

 Score =  119 bits (298), Expect = 4e-25
 Identities = 59/90 (65%), Positives = 70/90 (77%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           AWLRPEVMTSEA+YG S + +M  D    KE++ S    KRA+FDVSGFYEAI+PSK   
Sbjct: 219 AWLRPEVMTSEAKYGISESMNMEVDVYPVKEEETS-RPGKRARFDVSGFYEAIKPSKENS 277

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREKG 3
           ML+D  P+L+P LRPYQRRAAYWM+QREKG
Sbjct: 278 MLEDEIPDLVPVLRPYQRRAAYWMVQREKG 307


>gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
           binding isoform 1 [Theobroma cacao]
          Length = 1682

 Score =  119 bits (298), Expect = 4e-25
 Identities = 59/90 (65%), Positives = 70/90 (77%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           AWLRPEVMTSEA+YG S + +M  D    KE++ S    KRA+FDVSGFYEAI+PSK   
Sbjct: 219 AWLRPEVMTSEAKYGISESMNMEVDVYPVKEEETS-RPGKRARFDVSGFYEAIKPSKENS 277

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREKG 3
           ML+D  P+L+P LRPYQRRAAYWM+QREKG
Sbjct: 278 MLEDEIPDLVPVLRPYQRRAAYWMVQREKG 307


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 1320

 Score =  119 bits (298), Expect = 4e-25
 Identities = 58/90 (64%), Positives = 72/90 (80%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           AWLRPEVMTSEARY ++ +T+M  + +A   DD S  + KRAQFDV+G YEAI+PSK  P
Sbjct: 224 AWLRPEVMTSEARYRHAKSTEMEVNMAAEIGDDTS-NSGKRAQFDVAGLYEAIKPSKSDP 282

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREKG 3
           ML+D  P+LLP LRPYQRRAA+WM+Q+EKG
Sbjct: 283 MLEDDLPDLLPTLRPYQRRAAHWMVQQEKG 312


>gb|AFU82534.1| DNA-dependent ATPase, partial [Artemisia tridentata]
          Length = 163

 Score =  117 bits (292), Expect = 2e-24
 Identities = 58/90 (64%), Positives = 69/90 (76%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           AWLRPEV TSEARYGY+   D+       ++D+ S   RKRA+FDVSGFYEAI+PSK   
Sbjct: 65  AWLRPEVTTSEARYGYNLPKDIEIGL---EKDEESPDCRKRARFDVSGFYEAIKPSKDKQ 121

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREKG 3
           ML D  P+LLPELRPYQ+RAA+WM+QREKG
Sbjct: 122 MLIDDMPDLLPELRPYQKRAAFWMVQREKG 151


>ref|XP_004490508.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like isoform X1 [Cicer
           arietinum] gi|502095669|ref|XP_004490509.1| PREDICTED:
           E3 ubiquitin-protein ligase SHPRH-like isoform X2 [Cicer
           arietinum]
          Length = 1670

 Score =  116 bits (290), Expect = 4e-24
 Identities = 53/89 (59%), Positives = 68/89 (76%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           +WLRPE+MTSE RYG+S+  DM  DS   + DD    + K ++FD +GFYEAI+PSK  P
Sbjct: 218 SWLRPEIMTSEVRYGFSSYIDMEVDSQTERVDDGGYAS-KCSRFDPAGFYEAIKPSKAEP 276

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREK 6
           M++D  P LLPELRPYQRRAA+WM++REK
Sbjct: 277 MIEDDIPELLPELRPYQRRAAFWMVKREK 305


>ref|XP_006356480.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Solanum
           tuberosum]
          Length = 1677

 Score =  115 bits (288), Expect = 6e-24
 Identities = 55/89 (61%), Positives = 67/89 (75%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           AWLRPEV+T+EARYGY      +   ++G  D+ S   RK ++FDV+ FYEAI+PSK  P
Sbjct: 211 AWLRPEVVTAEARYGYQVAAPADIGLASGL-DESSSAARKLSRFDVASFYEAIKPSKEEP 269

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREK 6
           MLDD  P LLP+LRPYQRRAAYWM+QREK
Sbjct: 270 MLDDDLPGLLPKLRPYQRRAAYWMVQREK 298


>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
           gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
           helicase, putative [Ricinus communis]
          Length = 1588

 Score =  115 bits (288), Expect = 6e-24
 Identities = 55/90 (61%), Positives = 71/90 (78%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           AWLRPEV+TSEARYG + +T+++     G +   S   RKR +FDV+GFYEAI+PSK +P
Sbjct: 217 AWLRPEVVTSEARYGVTKSTEVDLVGEMGNDISYS---RKRPRFDVAGFYEAIKPSKSSP 273

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREKG 3
           +L+D  P+LLP LRPYQRRAAYWM+Q+EKG
Sbjct: 274 ILNDDLPDLLPVLRPYQRRAAYWMLQQEKG 303


>ref|XP_004252490.1| PREDICTED: uncharacterized protein LOC101252370 [Solanum
           lycopersicum]
          Length = 343

 Score =  115 bits (287), Expect = 8e-24
 Identities = 55/89 (61%), Positives = 67/89 (75%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           AWLRPEV+T+EARYGY      +   ++G  D+ S   RK ++FDV+ FYEAI+PSK  P
Sbjct: 211 AWLRPEVVTAEARYGYQVEAHADIGLASGL-DESSSSARKLSRFDVASFYEAIKPSKEEP 269

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREK 6
           MLDD  P LLP+LRPYQRRAAYWM+QREK
Sbjct: 270 MLDDDLPGLLPKLRPYQRRAAYWMVQREK 298


>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/88 (62%), Positives = 67/88 (76%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           AWLRPEV TSEARYG + + +M+ DS+ G  D   L ++K   FD +GFYEAI+PSK  P
Sbjct: 218 AWLRPEVTTSEARYGVAKSKEMDIDSNMGM-DVGDLDSKKHQNFDAAGFYEAIKPSKEDP 276

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQRE 9
           +LD   P+LLPELRPYQRRAAYWM+QRE
Sbjct: 277 LLDYDMPDLLPELRPYQRRAAYWMVQRE 304


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/88 (62%), Positives = 67/88 (76%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           AWLRPEV TSEARYG + + +M+ DS+ G  D   L ++K   FD +GFYEAI+PSK  P
Sbjct: 218 AWLRPEVTTSEARYGVAKSKEMDIDSNMGM-DVGDLDSKKHQNFDAAGFYEAIKPSKEDP 276

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQRE 9
           +LD   P+LLPELRPYQRRAAYWM+QRE
Sbjct: 277 LLDYDMPDLLPELRPYQRRAAYWMVQRE 304


>ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           SHPRH-like [Cucumis sativus]
          Length = 1520

 Score =  112 bits (281), Expect = 4e-23
 Identities = 55/89 (61%), Positives = 66/89 (74%)
 Frame = -1

Query: 269 WLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAPM 90
           WLRPEV+ SE +YG   +++M+T       DD S  +RK A FD  GFY+AI+PSK  PM
Sbjct: 222 WLRPEVVLSEVKYGVVKSSNMDTHLHHEAGDDTS-NSRKHANFDTIGFYDAIKPSKDEPM 280

Query: 89  LDDHFPNLLPELRPYQRRAAYWMIQREKG 3
           LD+  PNLLP+LRPYQRRAAYWMIQREKG
Sbjct: 281 LDEDIPNLLPKLRPYQRRAAYWMIQREKG 309


>ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Cucumis sativus]
          Length = 1520

 Score =  112 bits (281), Expect = 4e-23
 Identities = 55/89 (61%), Positives = 66/89 (74%)
 Frame = -1

Query: 269 WLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAPM 90
           WLRPEV+ SE +YG   +++M+T       DD S  +RK A FD  GFY+AI+PSK  PM
Sbjct: 222 WLRPEVVLSEVKYGVVKSSNMDTHLHHEAGDDTS-NSRKHANFDTIGFYDAIKPSKDEPM 280

Query: 89  LDDHFPNLLPELRPYQRRAAYWMIQREKG 3
           LD+  PNLLP+LRPYQRRAAYWMIQREKG
Sbjct: 281 LDEDIPNLLPKLRPYQRRAAYWMIQREKG 309


>gb|EMJ21511.1| hypothetical protein PRUPE_ppa000129mg [Prunus persica]
          Length = 1710

 Score =  111 bits (278), Expect = 9e-23
 Identities = 54/90 (60%), Positives = 66/90 (73%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           AWL PEVMTSEARYG S +T+M  D    +  + +    K  +FDV+GFYEAI+PSK   
Sbjct: 220 AWLHPEVMTSEARYGVSKSTEMEADLHT-QTGEANSGPGKHGRFDVAGFYEAIKPSKADA 278

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREKG 3
           ML D  P+LLPEL+PYQRRAAYWM++REKG
Sbjct: 279 MLQDDMPDLLPELKPYQRRAAYWMVRREKG 308


>ref|XP_006435949.1| hypothetical protein CICLE_v10030489mg [Citrus clementina]
           gi|568865570|ref|XP_006486147.1| PREDICTED: E3
           ubiquitin-protein ligase SHPRH-like isoform X3 [Citrus
           sinensis] gi|557538145|gb|ESR49189.1| hypothetical
           protein CICLE_v10030489mg [Citrus clementina]
          Length = 1236

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/90 (58%), Positives = 69/90 (76%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           +WLRPEV+TSEARYG S + +M+ +     ++D S  ++K A FDV+ FYEAI+ SK  P
Sbjct: 219 SWLRPEVLTSEARYGVSKSMEMDVELMTRTKNDVSA-SQKHASFDVARFYEAIKRSKAEP 277

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREKG 3
           ML++  P+LLP LRPYQRRAAYWM+QREKG
Sbjct: 278 MLEEDLPDLLPLLRPYQRRAAYWMVQREKG 307


>ref|XP_006435948.1| hypothetical protein CICLE_v10030489mg [Citrus clementina]
           gi|568865566|ref|XP_006486145.1| PREDICTED: E3
           ubiquitin-protein ligase SHPRH-like isoform X1 [Citrus
           sinensis] gi|568865568|ref|XP_006486146.1| PREDICTED: E3
           ubiquitin-protein ligase SHPRH-like isoform X2 [Citrus
           sinensis] gi|557538144|gb|ESR49188.1| hypothetical
           protein CICLE_v10030489mg [Citrus clementina]
          Length = 1685

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/90 (58%), Positives = 69/90 (76%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           +WLRPEV+TSEARYG S + +M+ +     ++D S  ++K A FDV+ FYEAI+ SK  P
Sbjct: 219 SWLRPEVLTSEARYGVSKSMEMDVELMTRTKNDVSA-SQKHASFDVARFYEAIKRSKAEP 277

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREKG 3
           ML++  P+LLP LRPYQRRAAYWM+QREKG
Sbjct: 278 MLEEDLPDLLPLLRPYQRRAAYWMVQREKG 307


>ref|XP_006575381.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like isoform X3
           [Glycine max]
          Length = 1503

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/89 (57%), Positives = 62/89 (69%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           +WLRPE+MTSE RYG+     M  D      DD +   RK A+FD +GF EAI+PSK  P
Sbjct: 218 SWLRPEIMTSEVRYGFGTCMKMEVDPQIEMADD-TCKARKHARFDPAGFCEAIKPSKSEP 276

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREK 6
           ML D  P LLP+LRPYQRRAA+WM++REK
Sbjct: 277 MLKDDIPELLPKLRPYQRRAAFWMVEREK 305


>ref|XP_006575379.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like isoform X1
           [Glycine max] gi|571441227|ref|XP_006575380.1|
           PREDICTED: E3 ubiquitin-protein ligase SHPRH-like
           isoform X2 [Glycine max]
          Length = 1671

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/89 (57%), Positives = 62/89 (69%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           +WLRPE+MTSE RYG+     M  D      DD +   RK A+FD +GF EAI+PSK  P
Sbjct: 218 SWLRPEIMTSEVRYGFGTCMKMEVDPQIEMADD-TCKARKHARFDPAGFCEAIKPSKSEP 276

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREK 6
           ML D  P LLP+LRPYQRRAA+WM++REK
Sbjct: 277 MLKDDIPELLPKLRPYQRRAAFWMVEREK 305


>ref|XP_004235225.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           SHPRH-like [Solanum lycopersicum]
          Length = 1681

 Score =  108 bits (271), Expect = 6e-22
 Identities = 55/95 (57%), Positives = 67/95 (70%), Gaps = 6/95 (6%)
 Frame = -1

Query: 272 AWLRPEVMT------SEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIR 111
           AWLRPEV+T      +EARYGY      +   ++G  D+ S   RK ++FDV+ FYEAI+
Sbjct: 211 AWLRPEVVTXXXXXXAEARYGYQVAAHADIGLASGL-DESSSSARKLSRFDVASFYEAIK 269

Query: 110 PSKGAPMLDDHFPNLLPELRPYQRRAAYWMIQREK 6
           PSK  PMLDD  P LLP+LRPYQRRAAYWM+QREK
Sbjct: 270 PSKEEPMLDDDLPGLLPKLRPYQRRAAYWMVQREK 304


>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
           gi|355516770|gb|AES98393.1| ATP-dependent helicase,
           putative [Medicago truncatula]
          Length = 1764

 Score =  108 bits (270), Expect = 7e-22
 Identities = 51/89 (57%), Positives = 64/89 (71%)
 Frame = -1

Query: 272 AWLRPEVMTSEARYGYSATTDMNTDSSAGKEDDPSLMTRKRAQFDVSGFYEAIRPSKGAP 93
           +WLRPE+MTSE +YG+S+  +M  D      DD      K ++FD +GFYEAI+PSK  P
Sbjct: 212 SWLRPEIMTSEVKYGFSSYMEMEVDLQTDMADDGGY-AGKCSRFDPAGFYEAIKPSKTEP 270

Query: 92  MLDDHFPNLLPELRPYQRRAAYWMIQREK 6
           ML+D  P LLPELRPYQRRAA WM++REK
Sbjct: 271 MLEDDIPELLPELRPYQRRAALWMVKREK 299


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