BLASTX nr result
ID: Rauwolfia21_contig00046894
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00046894
(257 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 99 7e-19
gb|ABA98827.2| retrotransposon protein, putative, Ty1-copia subc... 89 6e-16
ref|XP_004237696.1| PREDICTED: uncharacterized protein LOC101247... 87 2e-15
ref|NP_001060934.2| Os08g0133100 [Oryza sativa Japonica Group] g... 87 3e-15
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 87 3e-15
emb|CAH67713.1| H0512B01.8 [Oryza sativa Indica Group] 87 3e-15
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera] 86 4e-15
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 86 7e-15
gb|AFK88552.1| reverse transcriptase, partial [Arabidopsis halle... 86 7e-15
gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halle... 86 7e-15
gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis c... 85 1e-14
gb|AGH20666.1| reverse transcriptase, partial [Arabis hirsuta] 84 1e-14
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 84 1e-14
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle... 83 3e-14
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 83 3e-14
emb|CAH67708.1| H0512B01.3 [Oryza sativa Indica Group] 83 3e-14
gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group] 83 3e-14
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa] 83 4e-14
gb|ABR16288.1| unknown [Picea sitchensis] 82 6e-14
emb|CAB75932.1| putative protein [Arabidopsis thaliana] 82 6e-14
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 98.6 bits (244), Expect = 7e-19
Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
GSIQKHKA LVAKGY Q VDF+E FSPV E VR++L +A+QL LPV+Q DVK AFL
Sbjct: 874 GSIQKHKARLVAKGYSQQQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFL 933
Query: 77 -GELGEEAYVEQR*GYQVCGEEERVY 3
G+L EE YV Q G+ + G E +VY
Sbjct: 934 NGDLEEEVYVSQPQGFMITGNENKVY 959
>gb|ABA98827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1269
Score = 89.0 bits (219), Expect = 6e-16
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G I KHKA LVAKGY+ QP VDFNE+F+PV +E VR++L A+Q+ PV +DVK AFL
Sbjct: 825 GMITKHKARLVAKGYMQQPGVDFNEVFAPVARLESVRMLLARAAQVGWPVHHMDVKSAFL 884
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
GEL EE YV+Q G+ V G E +V
Sbjct: 885 NGELTEEVYVKQPPGFIVDGREHQV 909
>ref|XP_004237696.1| PREDICTED: uncharacterized protein LOC101247717 [Solanum
lycopersicum]
Length = 527
Score = 87.4 bits (215), Expect = 2e-15
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
GSIQKHKA LVAKGY Q +DF+E FSPV E VR L +A+ L P++Q DVK AFL
Sbjct: 418 GSIQKHKARLVAKGYSQQQGIDFDETFSPVARFETVRTFLALAANLNWPMYQFDVKSAFL 477
Query: 77 -GELGEEAYVEQR*GYQVCGEEERVY 3
G+L EE YV Q G+ V +E++VY
Sbjct: 478 NGDLEEEVYVSQPEGFVVNDKEDKVY 503
>ref|NP_001060934.2| Os08g0133100 [Oryza sativa Japonica Group]
gi|255678127|dbj|BAF22848.2| Os08g0133100 [Oryza sativa
Japonica Group]
Length = 495
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G + KHKA LVA+G++ QP +DF+E+F+PV ME +R++L VA+Q V +DVK AFL
Sbjct: 40 GKVVKHKARLVARGFVQQPGIDFDEVFAPVARMESIRLLLAVAAQKGWHVHHMDVKSAFL 99
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
G+L EE YV+Q G+ V GEE++V
Sbjct: 100 NGDLAEEVYVKQPPGFVVAGEEDKV 124
>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
Length = 1109
Score = 86.7 bits (213), Expect = 3e-15
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
GSIQKHKA LVAKGY Q VD+++ FSP+ E VR +L +A+ + V+Q DVK AFL
Sbjct: 735 GSIQKHKAQLVAKGYAQQHGVDYDDTFSPIALFETVRTLLALAAHMHWCVYQFDVKSAFL 794
Query: 77 -GELGEEAYVEQR*GYQVCGEEERVY 3
GEL EE YV Q G+ V G+EE VY
Sbjct: 795 NGELVEEVYVSQPEGFIVPGKEEHVY 820
>emb|CAH67713.1| H0512B01.8 [Oryza sativa Indica Group]
Length = 1454
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G + KHKA LVA+G++ QP +DF+E+F+PV ME +R++L VA+Q V +DVK AFL
Sbjct: 994 GKVVKHKARLVARGFVQQPGIDFDEVFAPVARMESIRLLLAVAAQKGWHVHHMDVKSAFL 1053
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
G+L EE YV+Q G+ V GEE++V
Sbjct: 1054 NGDLAEEVYVKQPPGFVVAGEEDKV 1078
>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
Length = 1265
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G + K+KA LVAKGY Q VD+ E+F+PV ME +R+++ +A+Q + ++QLDVK AFL
Sbjct: 837 GEVDKYKARLVAKGYTQQHGVDYTEVFAPVARMETIRLVVALAAQRKWTIYQLDVKSAFL 896
Query: 77 -GELGEEAYVEQR*GYQVCGEEERVY 3
GEL EE +VEQ GY G E++VY
Sbjct: 897 HGELNEEVFVEQPCGYVQKGHEQKVY 922
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/85 (49%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G I+++KA LVAKGY + +D++E+F+PV ME +R+++ A+Q + P+FQ+DVK AFL
Sbjct: 892 GEIERYKARLVAKGYKQKEGIDYDEVFAPVVRMETIRLLISQAAQFKWPIFQMDVKSAFL 951
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
G L EE Y+EQ GY GEE++V
Sbjct: 952 NGVLEEEVYIEQPPGYMKIGEEKKV 976
>gb|AFK88552.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/85 (49%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G ++++KA LVAKGY + +D++E+F+PV C+E VR+I+ +A+Q + + Q+DVK AFL
Sbjct: 54 GEVERYKARLVAKGYSQRAGIDYDEVFAPVACLETVRLIISLAAQNKWKIHQMDVKSAFL 113
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
G+L EE Y+EQ GY V GEE +V
Sbjct: 114 NGDLEEEVYIEQPQGYIVKGEENKV 138
>gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/85 (49%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G ++++KA LVAKGY + +D++E+F+PV C+E VR+I+ +A+Q + + Q+DVK AFL
Sbjct: 54 GEVERYKARLVAKGYSQRAGIDYDEVFAPVACLETVRLIISLAAQNKWKIHQMDVKSAFL 113
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
G+L EE Y+EQ GY V GEE +V
Sbjct: 114 NGDLEEEVYIEQPQGYIVKGEENKV 138
>gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 315
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G +++HKA LVAKGY + +D++E+F+PV +E VR+I+ +A+Q + Q+DVK AFL
Sbjct: 54 GEVERHKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNVWKIHQMDVKSAFL 113
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
GEL EE Y+EQ GY V GEE++V
Sbjct: 114 NGELDEEVYIEQPQGYVVKGEEDKV 138
>gb|AGH20666.1| reverse transcriptase, partial [Arabis hirsuta]
Length = 315
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/85 (48%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G ++++KA LVAKGY + +D++E+F+PV C+E VR+I+ +A+Q + Q+DVK FL
Sbjct: 54 GEVERYKARLVAKGYSQRAGIDYDEVFAPVACLETVRLIISLAAQNNWRIHQIDVKSTFL 113
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
G+L EE Y+EQ GY V GEE++V
Sbjct: 114 NGDLEEEVYIEQTQGYIVKGEEDKV 138
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 84.3 bits (207), Expect = 1e-14
Identities = 42/85 (49%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G +++HKA LVAKGY Q EVD++E+F+PV ME +R+++ +A+Q++ +FQ DVK AFL
Sbjct: 583 GEVERHKARLVAKGYKQQYEVDYDEVFAPVARMETIRLLISLAAQMKWRIFQFDVKSAFL 642
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
G L E+ YVEQ G+ + G+E +V
Sbjct: 643 NGYLEEDVYVEQPMGFVIEGQEGKV 667
>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/85 (48%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G ++++KA LVAKGY + +D++E+F+PV +E VR+I+++A+Q + + Q+DVK AFL
Sbjct: 54 GEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIILLAAQNKWKIHQMDVKSAFL 113
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
G+L EE Y+EQ GY V GEE++V
Sbjct: 114 NGDLEEEVYIEQPQGYIVKGEEDKV 138
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/85 (48%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G ++++KA LVAKGY+ + +D++E+F+PV +E VR+I+ +A+Q + + Q+DVK AFL
Sbjct: 893 GEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFL 952
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
G+L EE Y+EQ GY V GEE++V
Sbjct: 953 NGDLEEEVYIEQPQGYIVKGEEDKV 977
>emb|CAH67708.1| H0512B01.3 [Oryza sativa Indica Group]
Length = 1283
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G + KHKA LVA+G++ Q +DF+E+F+PV ME +R++L VA+Q V +DVK AFL
Sbjct: 925 GKVVKHKARLVARGFVQQHRIDFDEMFAPVARMESIRLLLAVAAQKGWRVHHMDVKSAFL 984
Query: 77 -GELGEEAYVEQR*GYQVCGEEERV 6
G+L EE YV+Q G+ V GEE++V
Sbjct: 985 NGDLAEEVYVKQPPGFVVAGEEDKV 1009
>gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1332
Score = 83.2 bits (204), Expect = 3e-14
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
GSI K+KA LVAKGY+ Q +DF E+F+PV +E VR +L +A+Q V +DVK AFL
Sbjct: 875 GSIVKYKARLVAKGYVQQHGIDFEEVFAPVARIETVRSLLALAAQEGWQVHHMDVKSAFL 934
Query: 77 -GELGEEAYVEQR*GYQVCGEEERVY 3
G+L EE YV Q G++V GEE +VY
Sbjct: 935 NGDLEEEVYVSQPLGFEVTGEEAKVY 960
>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
Length = 1187
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G + K KA LVAKGY Q +D+ E+++PV + +R+I+ +A+Q +FQLDVK AFL
Sbjct: 731 GKVDKCKARLVAKGYAQQFGIDYTEVYAPVARWDTIRLIVALAAQKNWTIFQLDVKSAFL 790
Query: 77 -GELGEEAYVEQR*GYQVCGEEERVY 3
GEL E+ Y+EQ G++ GEEE+VY
Sbjct: 791 HGELNEDVYIEQPQGFEQKGEEEKVY 816
>gb|ABR16288.1| unknown [Picea sitchensis]
Length = 363
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G + KHKA LVAKG+ + VD+NE F+PV ++ +R++L +A+Q V+Q+DVK AFL
Sbjct: 40 GELDKHKARLVAKGFAQEYGVDYNETFAPVARLDTIRMVLAIAAQHNWKVYQMDVKSAFL 99
Query: 77 -GELGEEAYVEQR*GYQVCGEEERVY 3
G L EE YV+Q Y+V G+E++VY
Sbjct: 100 NGYLEEEVYVQQPPRYEVRGQEDKVY 125
>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
Length = 1339
Score = 82.4 bits (202), Expect = 6e-14
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = -1
Query: 257 GSIQKHKALLVAKGYL*QPEVDFNEIFSPVTCMEIVRIILIVASQLQLPVFQLDVKLAFL 78
G + K+KA LVAKGY +D+ E+F+PV ++ VR IL ++SQ +FQLDVK AFL
Sbjct: 882 GEVDKYKARLVAKGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFL 941
Query: 77 -GELGEEAYVEQR*GYQVCGEEERVY 3
GEL EE YV Q G+ GEEE+VY
Sbjct: 942 HGELKEEVYVRQPEGFIREGEEEKVY 967