BLASTX nr result
ID: Rauwolfia21_contig00046695
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00046695
(709 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containi... 192 9e-47
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi... 192 9e-47
ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi... 191 2e-46
gb|EXB73287.1| hypothetical protein L484_009366 [Morus notabilis] 186 6e-45
emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera] 182 9e-44
gb|EOX94157.1| Pentatricopeptide repeat-containing protein, puta... 181 2e-43
ref|XP_004301045.1| PREDICTED: pentatricopeptide repeat-containi... 177 4e-42
ref|XP_002512699.1| pentatricopeptide repeat-containing protein,... 169 6e-40
ref|XP_002303738.2| hypothetical protein POPTR_0003s15840g, part... 167 2e-39
gb|EMJ28376.1| hypothetical protein PRUPE_ppa020455mg [Prunus pe... 164 3e-38
ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containi... 118 2e-24
gb|EOX94627.1| Tetratricopeptide repeat-like superfamily protein... 115 2e-23
ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containi... 114 4e-23
ref|XP_006423843.1| hypothetical protein CICLE_v10029811mg [Citr... 112 1e-22
ref|XP_006427149.1| hypothetical protein CICLE_v10024866mg [Citr... 107 3e-21
ref|XP_006839028.1| hypothetical protein AMTR_s03531p00004900 [A... 107 4e-21
emb|CBI36352.3| unnamed protein product [Vitis vinifera] 107 4e-21
ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat... 107 4e-21
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,... 107 5e-21
ref|XP_006465408.1| PREDICTED: pentatricopeptide repeat-containi... 106 6e-21
>ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 429
Score = 192 bits (488), Expect = 9e-47
Identities = 94/174 (54%), Positives = 123/174 (70%)
Frame = -2
Query: 525 HQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRIL 346
HQ FD IP+ DTFAWNNLIQT+L++G+ V S Y++ML GV+PD HTLPR++ A+R
Sbjct: 13 HQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQY 72
Query: 345 GNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTL 166
G+L +GKQLH K GFSS+ YV +SL+ELYG+LD D AKW + N+V+WT+
Sbjct: 73 GDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTC--RNSVSWTV 130
Query: 165 LAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
LA LY++ KP LA+DLF++M+E + + ID VA AT I AC LK L GR IH
Sbjct: 131 LAKLYLREDKPSLALDLFYQMVELADD-IDAVALATAIGACGALKMLHHGRNIH 183
Score = 77.8 bits (190), Expect = 3e-12
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
Frame = -2
Query: 549 DKQTQKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLG-VKPDSHTLP 373
D + K FFD +P +D +W LI Y+ G + ++++M + G +KPD T+
Sbjct: 207 DCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTIS 266
Query: 372 RVLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFD 193
+L A + GK++H +VVK F + V ++L+++Y I +A F +
Sbjct: 267 SILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTF--SMMK 324
Query: 192 KNNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREG 16
+ + V+W+++ Y + + +L + LF EM ++ D + + V+ AC + EG
Sbjct: 325 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEG 383
Score = 62.4 bits (150), Expect = 1e-07
Identities = 41/165 (24%), Positives = 76/165 (46%)
Frame = -2
Query: 498 RDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLSLGKQL 319
R++ +W L + YL +P+ ++ +M+ L D+ L + A L L G+ +
Sbjct: 123 RNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNI 182
Query: 318 HCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKNS 139
H G + V++SLL++Y D I A+ +F + + ++WT L +YVK
Sbjct: 183 HHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFD--QMPSKDIISWTELIHMYVKKG 240
Query: 138 KPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
A LF +M D ++++ AC + + + G+ IH
Sbjct: 241 GINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIH 285
>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 629
Score = 192 bits (488), Expect = 9e-47
Identities = 94/174 (54%), Positives = 123/174 (70%)
Frame = -2
Query: 525 HQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRIL 346
HQ FD IP+ DTFAWNNLIQT+L++G+ V S Y++ML GV+PD HTLPR++ A+R
Sbjct: 13 HQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQY 72
Query: 345 GNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTL 166
G+L +GKQLH K GFSS+ YV +SL+ELYG+LD D AKW + N+V+WT+
Sbjct: 73 GDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTC--RNSVSWTV 130
Query: 165 LAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
LA LY++ KP LA+DLF++M+E + + ID VA AT I AC LK L GR IH
Sbjct: 131 LAKLYLREDKPSLALDLFYQMVELADD-IDAVALATAIGACGALKMLHHGRNIH 183
Score = 77.8 bits (190), Expect = 3e-12
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
Frame = -2
Query: 549 DKQTQKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLG-VKPDSHTLP 373
D + K FFD +P +D +W LI Y+ G + ++++M + G +KPD T+
Sbjct: 207 DCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTIS 266
Query: 372 RVLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFD 193
+L A + GK++H +VVK F + V ++L+++Y I +A F +
Sbjct: 267 SILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTF--SMMK 324
Query: 192 KNNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREG 16
+ + V+W+++ Y + + +L + LF EM ++ D + + V+ AC + EG
Sbjct: 325 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEG 383
Score = 62.4 bits (150), Expect = 1e-07
Identities = 41/165 (24%), Positives = 76/165 (46%)
Frame = -2
Query: 498 RDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLSLGKQL 319
R++ +W L + YL +P+ ++ +M+ L D+ L + A L L G+ +
Sbjct: 123 RNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNI 182
Query: 318 HCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKNS 139
H G + V++SLL++Y D I A+ +F + + ++WT L +YVK
Sbjct: 183 HHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFD--QMPSKDIISWTELIHMYVKKG 240
Query: 138 KPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
A LF +M D ++++ AC + + + G+ IH
Sbjct: 241 GINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIH 285
>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 662
Score = 191 bits (486), Expect = 2e-46
Identities = 95/176 (53%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Frame = -2
Query: 525 HQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRIL 346
HQ FD IP+ +TFAWNNLIQT+L++G+ +V S Y++MLL GV+PD HT+PR+L A+R
Sbjct: 47 HQLFDEIPVSNTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAARHT 106
Query: 345 GNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYF-KNARFDKNNTVAWT 169
+ S GKQ+H H +K G SS++YV S+LLE+YG LDG +AAK F K+AR N+V+WT
Sbjct: 107 SSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGANAAKLVFCKSAR---RNSVSWT 163
Query: 168 LLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIHQ 1
L++ LY+ KP LA+D+F +M+E S + ID +A T I AC MLKSL+EGR +H+
Sbjct: 164 LISRLYIMEDKPGLAVDMFKQMVE-SKSEIDPLALVTAIVACGMLKSLQEGRYVHE 218
Score = 84.3 bits (207), Expect = 3e-14
Identities = 45/174 (25%), Positives = 92/174 (52%)
Frame = -2
Query: 534 KQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAAS 355
K FD +P +D +W + + Y+ +G + ++++M + GVKPDS + +L A
Sbjct: 246 KDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPDSLAISSILPAC 305
Query: 354 RILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVA 175
GK++H ++++ G + V +++L++Y I++A F A + ++
Sbjct: 306 GRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIF--AGMKDRDAIS 363
Query: 174 WTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGR 13
WT++ Y + + +L +DLF +M ++S ID +A+A + AC + + +GR
Sbjct: 364 WTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGR 417
Score = 61.2 bits (147), Expect = 3e-07
Identities = 41/165 (24%), Positives = 80/165 (48%)
Frame = -2
Query: 498 RDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLSLGKQL 319
R++ +W + + Y+ +P ++++M+ + D L + A +L +L G+ +
Sbjct: 157 RNSVSWTLISRLYIMEDKPGLAVDMFKQMVESKSEIDPLALVTAIVACGMLKSLQEGRYV 216
Query: 318 HCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKNS 139
H K G +D V++SLL++Y I A+ F R + ++WT + YVKN
Sbjct: 217 HEIAKKCGLEADVLVSNSLLKMYIDCGSIKDARAVFD--RMPSKDVISWTEIFRGYVKNG 274
Query: 138 KPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
+ LF +M G D +A ++++ AC + ++G+ IH
Sbjct: 275 GFNEGLKLFRQM-SMEGVKPDSLAISSILPACGRGAAHKQGKEIH 318
>gb|EXB73287.1| hypothetical protein L484_009366 [Morus notabilis]
Length = 676
Score = 186 bits (472), Expect = 6e-45
Identities = 100/176 (56%), Positives = 126/176 (71%), Gaps = 1/176 (0%)
Frame = -2
Query: 525 HQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAA-SRI 349
H+ FD + L DTFAWN+LIQ+YL+S + V YQ+ML GV PD HTLPRVLAA S +
Sbjct: 58 HKMFDEMSLSDTFAWNSLIQSYLTSRDLHHVLFTYQQMLRRGVCPDRHTLPRVLAAVSGL 117
Query: 348 LGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWT 169
G L +GKQ+H H +K GFS D YV S+LLE+YG LD ID AK + + + N V+WT
Sbjct: 118 SGGLFVGKQVHGHAIKLGFSHDQYVISALLEMYGKLDDIDRAKCLILD-KSPRTNAVSWT 176
Query: 168 LLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIHQ 1
LLA LY++ KP LAIDLF++M++ SG ID VA AT ISA AMLKSL++GR +HQ
Sbjct: 177 LLARLYIREGKPSLAIDLFYQMLD-SGAEIDSVALATAISAAAMLKSLKDGRILHQ 231
Score = 80.5 bits (197), Expect = 5e-13
Identities = 46/170 (27%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVL-AASRILGN 340
FD +P RD +W +I Y+ G ++ +++RM+ G+KPD ++ +L A +R+ N
Sbjct: 265 FDRMPSRDIISWTEIIHAYVKKGGYSEGLKLFRRMITNGLKPDPFSISSILPACARVTAN 324
Query: 339 LSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLA 160
GK++H ++++ + V ++L+++Y I+ A F A+ + ++WT++
Sbjct: 325 -KQGKEIHGYLLRNRIDMNLTVLNALIDMYAKSGCIELASRMF--AQLKHKDVISWTVMI 381
Query: 159 GLYVKNSKPQLAIDLFFEM-IEHSGNAIDVVAFATVISACAMLKSLREGR 13
Y + + LA+DL E+ E S +D + +A V+ AC+ + + EG+
Sbjct: 382 LGYSLHGRGDLAVDLCRELENELSAVRLDQLRYADVLRACSSARKIEEGK 431
Score = 69.7 bits (169), Expect = 9e-10
Identities = 46/170 (27%), Positives = 84/170 (49%)
Frame = -2
Query: 513 DGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLS 334
D P + +W L + Y+ G+P+ ++ +ML G + DS L ++A+ +L +L
Sbjct: 165 DKSPRTNAVSWTLLARLYIREGKPSLAIDLFYQMLDSGAEIDSVALATAISAAAMLKSLK 224
Query: 333 LGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGL 154
G+ LH + G V++SLL++Y I A+ F R + ++WT +
Sbjct: 225 DGRILHQIARQRGLEFKVLVSNSLLKMYIDCGSIQDARAGFD--RMPSRDIISWTEIIHA 282
Query: 153 YVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
YVK + LF MI +G D + ++++ ACA + + ++G+ IH
Sbjct: 283 YVKKGGYSEGLKLFRRMIT-NGLKPDPFSISSILPACARVTANKQGKEIH 331
>emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
Length = 734
Score = 182 bits (462), Expect = 9e-44
Identities = 92/171 (53%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = -2
Query: 525 HQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRIL 346
HQ FD IP+ +TFAWNNLIQT+L++G+ +V S Y++MLL GV+PD HT+PR+L A+R
Sbjct: 142 HQLFDEIPVSNTFAWNNLIQTHLTNGDSGRVVSTYRQMLLRGVRPDKHTIPRILTAARHT 201
Query: 345 GNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYF-KNARFDKNNTVAWT 169
+ S GKQ+H H +K G SS++YV S+LLE+YG LDG +AAK F K+AR N+V+WT
Sbjct: 202 SSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGABAAKLVFCKSAR---RNSVSWT 258
Query: 168 LLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREG 16
L++ LY+ KP LA+D+F +M+E S + ID +A T I AC MLKSL G
Sbjct: 259 LISRLYIMEDKPGLAVDMFKQMVE-SKSEIDPLALVTAIVACGMLKSLPGG 308
Score = 84.3 bits (207), Expect = 3e-14
Identities = 45/174 (25%), Positives = 92/174 (52%)
Frame = -2
Query: 534 KQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAAS 355
K FD +P +D +W + + Y+ +G + ++++M + GVKPDS + +L A
Sbjct: 318 KDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPDSLAISSILPAC 377
Query: 354 RILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVA 175
GK++H ++++ G + V +++L++Y I++A F A + ++
Sbjct: 378 GRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIF--AGMKDRDAIS 435
Query: 174 WTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGR 13
WT++ Y + + +L +DLF +M ++S ID +A+A + AC + + +GR
Sbjct: 436 WTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGR 489
>gb|EOX94157.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 656
Score = 181 bits (459), Expect = 2e-43
Identities = 94/177 (53%), Positives = 123/177 (69%), Gaps = 2/177 (1%)
Frame = -2
Query: 525 HQFFDGIPLR--DTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASR 352
HQ IPL +TFAWN LIQT+LS+ + QV SVY M+L GV+PD HTLPRVL ASR
Sbjct: 39 HQLVLEIPLSTSNTFAWNQLIQTHLSNKQLQQVLSVYHGMMLRGVRPDKHTLPRVLTASR 98
Query: 351 ILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAW 172
+ NL+ GKQ+H H K GFSSD YV ++L+E+YG L G+DAAKW NA N+VAW
Sbjct: 99 LCTNLAFGKQVHAHAFKLGFSSDLYVITALMEMYGRLHGVDAAKWVLDNA--PTTNSVAW 156
Query: 171 TLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIHQ 1
T+LA L++ ++KP LA ++F +M+ + ID V AT I AC++LKSL++ R HQ
Sbjct: 157 TILAKLHLIDNKPHLAFEIFDQMLRLKAD-IDPVGLATAIGACSLLKSLQQARNAHQ 212
Score = 87.0 bits (214), Expect = 5e-15
Identities = 47/169 (27%), Positives = 88/169 (52%)
Frame = -2
Query: 549 DKQTQKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPR 370
D + ++ FFD +P +D +W +I+ Y+ G + +++RM+ G+KPDS T+
Sbjct: 235 DCDSLEEARSFFDAMPSKDVISWTEMIRGYVKKGGYNEGLKLFRRMIRAGIKPDSLTISS 294
Query: 369 VLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDK 190
+L A + GK+LH ++ + G + V ++++++Y I+ A F +
Sbjct: 295 ILPACARVPAHKQGKELHAYLFRNGIDLNLTVQNAIMDMYVKSGFIELASTVFMCMM--E 352
Query: 189 NNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISAC 43
+ V+WT++ Y + + +DLFFEM + S ID +A V+ AC
Sbjct: 353 RDIVSWTIMILGYSLHGQGGRGLDLFFEMEKESSLEIDEFTYAAVLHAC 401
Score = 64.3 bits (155), Expect = 4e-08
Identities = 41/170 (24%), Positives = 78/170 (45%)
Frame = -2
Query: 513 DGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLS 334
D P ++ AW L + +L +P ++ +ML L D L + A +L +L
Sbjct: 146 DNAPTTNSVAWTILAKLHLIDNKPHLAFEIFDQMLRLKADIDPVGLATAIGACSLLKSLQ 205
Query: 333 LGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGL 154
+ H GF + +SLL++Y D ++ A+ +F + ++WT +
Sbjct: 206 QARNAHQIARDCGFEFHLLIGNSLLKMYIDCDSLEEARSFFD--AMPSKDVISWTEMIRG 263
Query: 153 YVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
YVK + LF MI +G D + ++++ ACA + + ++G+ +H
Sbjct: 264 YVKKGGYNEGLKLFRRMI-RAGIKPDSLTISSILPACARVPAHKQGKELH 312
>ref|XP_004301045.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 656
Score = 177 bits (448), Expect = 4e-42
Identities = 93/207 (44%), Positives = 132/207 (63%), Gaps = 3/207 (1%)
Frame = -2
Query: 612 QRGTIVSNPYFSCCKCSSQMGDKQTQKQ---NHQFFDGIPLRDTFAWNNLIQTYLSSGEP 442
QR I NP +C + QT ++ H+ FDG+ DT+AWN LIQT++++ +
Sbjct: 10 QRLLIKDNP-INCASQQRHSRNVQTPRKVALAHRAFDGMSHSDTYAWNKLIQTHIANNDF 68
Query: 441 TQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSL 262
S Y +ML GV+PD HTLPR L+ASR+ +LSLGKQLHCH VKFG ++D YV ++L
Sbjct: 69 HYAVSTYDQMLHRGVRPDRHTLPRALSASRLSDDLSLGKQLHCHAVKFGCANDRYVIAAL 128
Query: 261 LELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNA 82
+ELYG L D AK F A + V+WT++A LY+ KP++A+D+F M+E SG
Sbjct: 129 IELYGRLQSADTAKCVFDKA--SVKDLVSWTMIARLYIVEGKPRMALDMFDGMVE-SGAK 185
Query: 81 IDVVAFATVISACAMLKSLREGRRIHQ 1
+D VA AT AC M+KS+ +G ++H+
Sbjct: 186 MDAVALATAAGACGMMKSMTDGVKVHR 212
Score = 75.9 bits (185), Expect = 1e-11
Identities = 42/168 (25%), Positives = 88/168 (52%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
FD P +D +W +I+ Y+ G + ++++M G+KPD ++ VL A +
Sbjct: 246 FDQRPAKDVISWTEMIRVYVKKGGFNEGLKLFRQMAADGLKPDQLSVSSVLPACARVSAY 305
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
GK++H ++++ G + V ++L+++Y I++A F A + +++T++
Sbjct: 306 KQGKEIHGYLLRNGIHMNLTVQNALMDMYIKSGFIESALKIF--AGLKHKDVISYTVMIL 363
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGR 13
Y + + L +DLF +M + ID + +A V+ AC + ++EG+
Sbjct: 364 GYSLHGQGPLGVDLFRQMEKELSIKIDELTYAAVLHACVAARMVKEGK 411
Score = 66.2 bits (160), Expect = 1e-08
Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
FD ++D +W + + Y+ G+P ++ M+ G K D+ L A ++ ++
Sbjct: 145 FDKASVKDLVSWTMIARLYIVEGKPRMALDMFDGMVESGAKMDAVALATAAGACGMMKSM 204
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDK---NNTVAWTL 166
+ G ++H + G D V++SL ++Y ID A FD+ + ++WT
Sbjct: 205 TDGVKVHRVAKEQGLEFDVLVSNSLSKMY-----IDCGCLEDARAIFDQRPAKDVISWTE 259
Query: 165 LAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
+ +YVK + LF +M G D ++ ++V+ ACA + + ++G+ IH
Sbjct: 260 MIRVYVKKGGFNEGLKLFRQMAA-DGLKPDQLSVSSVLPACARVSAYKQGKEIH 312
>ref|XP_002512699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548660|gb|EEF50151.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 686
Score = 169 bits (429), Expect = 6e-40
Identities = 85/173 (49%), Positives = 116/173 (67%)
Frame = -2
Query: 522 QFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILG 343
Q D IPL DTFAWNNLI ++L++ +P S+Y MLL G PD T PRVL ASR+
Sbjct: 52 QPLDEIPLSDTFAWNNLIHSHLTNRDPFSALSIYLHMLLRGALPDRRTFPRVLNASRLST 111
Query: 342 NLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLL 163
NL LGKQ+H +KFGFSSD YV SSL++ YG LD DAA+ F N+ N+V+WT+L
Sbjct: 112 NLFLGKQIHAQALKFGFSSDPYVISSLIDFYGHLDSTDAARSLFDNS--PSKNSVSWTVL 169
Query: 162 AGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
A LY+ +KP + + LF++M++ + + D VA AT + AC ML+S+ G+ +H
Sbjct: 170 ARLYLMQNKPDVVLSLFYQMLDFN-SLFDPVALATALRACGMLRSMHHGKILH 221
Score = 75.5 bits (184), Expect = 2e-11
Identities = 37/168 (22%), Positives = 87/168 (51%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
F +P +D +W +I Y+ GE + ++++M + G++PDS +L +L A
Sbjct: 256 FHQMPTKDIISWTEIINGYVKIGEFNEALKLFRQMNIAGIRPDSLSLSTILPACARPAAH 315
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
LG+++H ++++ G + + ++L+++Y +++A F R + + ++WT++
Sbjct: 316 KLGREIHAYLLRNGIELNLMLQNALIDMYVKSGFMESASLIF--VRMKEKDVISWTVMIL 373
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGR 13
+ + + +L ++LF + + ID +A V+ C + EG+
Sbjct: 374 GFSLHGQGELGVELFRRLEKDPSIEIDQYIYAAVLRCCTTACMVEEGK 421
Score = 68.6 bits (166), Expect = 2e-09
Identities = 50/171 (29%), Positives = 84/171 (49%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
FD P +++ +W L + YL +P V S++ +ML D L L A +L ++
Sbjct: 155 FDNSPSKNSVSWTVLARLYLMQNKPDVVLSLFYQMLDFNSLFDPVALATALRACGMLRSM 214
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
GK LH K D V++SLL++Y I+ A+ F + + ++WT +
Sbjct: 215 HHGKILHGFAKKCRLEFDILVSNSLLKMYVDCHCIEDARATFH--QMPTKDIISWTEIIN 272
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
YVK + A+ LF +M +G D ++ +T++ ACA + + GR IH
Sbjct: 273 GYVKIGEFNEALKLFRQM-NIAGIRPDSLSLSTILPACARPAAHKLGREIH 322
>ref|XP_002303738.2| hypothetical protein POPTR_0003s15840g, partial [Populus
trichocarpa] gi|550343274|gb|EEE78717.2| hypothetical
protein POPTR_0003s15840g, partial [Populus trichocarpa]
Length = 566
Score = 167 bits (424), Expect = 2e-39
Identities = 81/163 (49%), Positives = 111/163 (68%)
Frame = -2
Query: 492 TFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLSLGKQLHC 313
TFAWNNLI T+LS+ +P S+Y M++ G PD TLPRVL ASRI G+L LGKQLH
Sbjct: 34 TFAWNNLIHTHLSNRDPGGALSIYHHMMMRGACPDRRTLPRVLTASRICGDLFLGKQLHG 93
Query: 312 HVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKNSKP 133
+K GF + YV ++L+E+YG LDGI+A KW F + + N+VAWT++ LY+ +KP
Sbjct: 94 QAIKLGFFDEHYVITALIEIYGRLDGIEAGKWLFDKS--PRRNSVAWTMILKLYLMENKP 151
Query: 132 QLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
LAI++F++M+E + ID V T AC +LKS+ GRR+H
Sbjct: 152 DLAINVFYQMVELNAR-IDSVVLITAAGACGLLKSVEHGRRVH 193
Score = 75.5 bits (184), Expect = 2e-11
Identities = 43/179 (24%), Positives = 87/179 (48%)
Frame = -2
Query: 549 DKQTQKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPR 370
D Q + FF+ + +D +W +I Y+ GE + ++++M + G+KPDS ++
Sbjct: 217 DCQRMEDARGFFNQMTTKDVISWTEIICGYVKKGEFNEALKLFRKMNMDGIKPDSLSVSS 276
Query: 369 VLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDK 190
VL A GK++H + ++ G ++ V ++ ++Y +D A F+ R K
Sbjct: 277 VLPACARTVAHKNGKEIHGYSLRNGMDNNLIVQNATTDMYAKSGLVDYALKVFE--RMKK 334
Query: 189 NNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGR 13
+ ++WT++ + + K +L ++LF M + D +A V+ C + EG+
Sbjct: 335 RDVISWTVMILGFSLHGKGELGVELFCRMEKDQRVEADQFTYAAVLHCCTAACMVEEGK 393
Score = 73.9 bits (180), Expect = 5e-11
Identities = 47/171 (27%), Positives = 88/171 (51%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
FD P R++ AW +++ YL +P +V+ +M+ L + DS L A +L ++
Sbjct: 127 FDKSPRRNSVAWTMILKLYLMENKPDLAINVFYQMVELNARIDSVVLITAAGACGLLKSV 186
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
G+++H KF SD V++SLL++ ++ A+ +F + + ++WT +
Sbjct: 187 EHGRRVHDVARKFRLESDILVSNSLLKMQIDCQRMEDARGFFN--QMTTKDVISWTEIIC 244
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
YVK + A+ LF +M G D ++ ++V+ ACA + + G+ IH
Sbjct: 245 GYVKKGEFNEALKLFRKM-NMDGIKPDSLSVSSVLPACARTVAHKNGKEIH 294
>gb|EMJ28376.1| hypothetical protein PRUPE_ppa020455mg [Prunus persica]
Length = 654
Score = 164 bits (415), Expect = 3e-38
Identities = 83/174 (47%), Positives = 117/174 (67%)
Frame = -2
Query: 522 QFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILG 343
+ + +P DTFAWN LIQT++++ S Y +MLL GV+PD HTLPR+L+ASR+
Sbjct: 41 KLLEKMPHSDTFAWNKLIQTHIANAHFDNALSTYHQMLLRGVRPDRHTLPRILSASRLSV 100
Query: 342 NLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLL 163
+L LGKQLH H +K G S D YV ++L+ELYG L +DAAK F + ++V+WT+L
Sbjct: 101 DLPLGKQLHGHALKLGCSDDRYVVAALIELYGRLHSVDAAKGLFDKS--PVKDSVSWTML 158
Query: 162 AGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIHQ 1
A LY+ KP +A+ +F M+E SG ID VA AT AC MLKS+ +G+++H+
Sbjct: 159 ARLYIMEGKPGMALHVFDGMVE-SGAQIDPVALATAAGACGMLKSVIDGKKVHR 211
Score = 78.2 bits (191), Expect = 2e-12
Identities = 46/168 (27%), Positives = 87/168 (51%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
FD +P +D +W +I + G + ++++M+ G KPDS ++ VL A +
Sbjct: 245 FDQMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIADGAKPDSLSVSSVLPACARMSAS 304
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
GK++H ++++ G + V ++L+++Y I++A F A + V+WT++
Sbjct: 305 KQGKEIHGYLIRNGIRMNLTVLNALMDMYVKSGFIESASKIF--AGLKDKDVVSWTVMIL 362
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGR 13
Y + + QL ++LF +M E S ID +A V+ AC + EG+
Sbjct: 363 GYSLHGQGQLGVNLFRQM-EDSSIQIDEFTYAAVLRACVAALMVEEGK 409
Score = 70.1 bits (170), Expect = 7e-10
Identities = 45/171 (26%), Positives = 84/171 (49%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
FD P++D+ +W L + Y+ G+P V+ M+ G + D L A +L ++
Sbjct: 144 FDKSPVKDSVSWTMLARLYIMEGKPGMALHVFDGMVESGAQIDPVALATAAGACGMLKSV 203
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
GK++H + G D V+++LL++Y +D A F + + ++WT +
Sbjct: 204 IDGKKVHRVAKERGLEFDVLVSNTLLKMYMDCGCVDDAWSVFD--QMPSKDVISWTGMIH 261
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
VK + LF +MI G D ++ ++V+ ACA + + ++G+ IH
Sbjct: 262 ANVKRGGFNEGLKLFRQMIA-DGAKPDSLSVSSVLPACARMSASKQGKEIH 311
>ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 608
Score = 118 bits (295), Expect = 2e-24
Identities = 76/226 (33%), Positives = 116/226 (51%), Gaps = 7/226 (3%)
Frame = -2
Query: 660 ILHSCFSISPENPTLFQRGTIVSNPYFS-----CCKCSSQMGD--KQTQKQNHQFFDGIP 502
+L SC S+ P L Q T+V + C K S +G T + FD +P
Sbjct: 39 LLSSCHSL----PALKQLHTLVLTTGYHKNLLICTKIVS-LGCFLSPTMDYARKLFDQMP 93
Query: 501 LRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLSLGKQ 322
RD FAWN LI+ Y + G + +Y+ M L G+ PD++T P VL + +L L G++
Sbjct: 94 QRDVFAWNTLIRGYSNLGPCQESIFLYKEMHLQGILPDNYTFPFVLRSCSVLSALREGRE 153
Query: 321 LHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKN 142
+HC+++K GF SD +V SSL+ LY ++ F R N V+WT + YV+N
Sbjct: 154 IHCNIIKHGFESDVFVQSSLITLYAQSGETLDSELVFDQMRV--RNIVSWTAMIAGYVQN 211
Query: 141 SKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
P+ + +F +M++ SG + + +V+ ACA L L G IH
Sbjct: 212 GIPEKGLGVFLKMVD-SGTLPNAITLVSVLPACARLDCLDLGMLIH 256
Score = 86.3 bits (212), Expect = 9e-15
Identities = 53/172 (30%), Positives = 87/172 (50%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
FD + +R+ +W +I Y+ +G P + V+ +M+ G P++ TL VL A L L
Sbjct: 190 FDQMRVRNIVSWTAMIAGYVQNGIPEKGLGVFLKMVDSGTLPNAITLVSVLPACARLDCL 249
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
LG +H + +K G +D + ++L+ YG +D A F + +++ V+W +
Sbjct: 250 DLGMLIHGYSIKLGVETDVSLVNALVAFYGKCGLVDVAWSLFDQMK--EHSVVSWNAIIA 307
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIHQ 1
Y +N I LF M+ G D + TVISACA L +L G+ IH+
Sbjct: 308 AYEQNDVGSSPIKLFHRMLGQ-GVEFDYITVVTVISACARLGALGTGKWIHE 358
Score = 70.1 bits (170), Expect = 7e-10
Identities = 47/169 (27%), Positives = 81/169 (47%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
FD + +WN +I Y + + ++ RML GV+ D T+ V++A LG L
Sbjct: 291 FDQMKEHSVVSWNAIIAAYEQNDVGSSPIKLFHRMLGQGVEFDYITVVTVISACARLGAL 350
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
GK +H V G + +T++L+++Y I++A+ F R + V+W+ + G
Sbjct: 351 GTGKWIHELVKSKGLECNVPITNALIDMYAKCGSIESARDVFD--RLPSRSVVSWSSIIG 408
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRR 10
+ + A++LF M E G + F V++AC + EGRR
Sbjct: 409 ACASHGHGREALELFSRMKE-EGVPPNSFTFTAVLTACRHSGLVEEGRR 456
>gb|EOX94627.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 966
Score = 115 bits (287), Expect = 2e-23
Identities = 69/198 (34%), Positives = 100/198 (50%)
Frame = -2
Query: 597 VSNPYFSCCKCSSQMGDKQTQKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQ 418
VS F K G + + Q FD + R F WN +I Y+S+GEP Y+
Sbjct: 120 VSESVFLGTKLVFMYGKCGSIENAEQVFDQMGQRSIFTWNAMIGAYVSNGEPLGALETYK 179
Query: 417 RMLLLGVKPDSHTLPRVLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLD 238
+M +LGV D++T P +L ASR+L NL LG ++H VKFG SS +V +SL+ +Y D
Sbjct: 180 QMRVLGVSLDAYTFPSLLKASRLLKNLRLGTEIHGLAVKFGCSSTVFVANSLVAMYAKCD 239
Query: 237 GIDAAKWYFKNARFDKNNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFAT 58
+ A+ F+ KN+ V+W + Y N K A+ LF EM + +G + F
Sbjct: 240 DLYGARRLFERMA-QKNDVVSWNSIVSAYAANGKSMEALKLFREM-QKAGLDRNTYTFVA 297
Query: 57 VISACAMLKSLREGRRIH 4
+ ACA + G IH
Sbjct: 298 SLQACADYSFRKLGMEIH 315
Score = 82.4 bits (202), Expect = 1e-13
Identities = 50/174 (28%), Positives = 88/174 (50%)
Frame = -2
Query: 522 QFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILG 343
Q F+ I +D +W ++I + +G + ++ M G++PDS L +L+ + L
Sbjct: 549 QTFELIKFKDVVSWTSMISACVRNGLANEALKLFHIMNKTGIQPDSVALISLLSGASNLS 608
Query: 342 NLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLL 163
L GK++H V++ GF + + SSL+++Y ++ A FK+ + V WT +
Sbjct: 609 GLKNGKEIHSFVIRKGFILEGSIASSLVDMYSHCGMVENAYKVFKSVQ--NKGLVLWTSM 666
Query: 162 AGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIHQ 1
Y + + AIDLF +M E+ D V F V+ AC+ + EGRR+ +
Sbjct: 667 INAYGMHGHGKAAIDLFNKMKENL--TPDHVTFLAVLYACSHSGLIDEGRRVFE 718
Score = 75.9 bits (185), Expect = 1e-11
Identities = 50/218 (22%), Positives = 103/218 (47%)
Frame = -2
Query: 657 LHSCFSISPENPTLFQRGTIVSNPYFSCCKCSSQMGDKQTQKQNHQFFDGIPLRDTFAWN 478
+H+ S ++ ++ ++S Y CCK S + + F+ + +D + N
Sbjct: 314 IHAAVLKSTQHLDVYVANALISM-YVRCCKMSEAV----------RIFNELDEKDKVSRN 362
Query: 477 NLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLSLGKQLHCHVVKF 298
+++ ++ +G + + L G KPD T+ +L A LG L G++LH H +K+
Sbjct: 363 SMLTGFIQNGMYHEAMYFFHDFLNAGQKPDQVTIISILVACGRLGYLLNGRELHAHAIKY 422
Query: 297 GFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKNSKPQLAID 118
GF D V ++L+++Y ++ F R + ++WT + Y +N+ A +
Sbjct: 423 GFDFDLQVGNTLIDMYAKCGCVNHMGRAFD--RMPYKDIISWTTIIAGYAQNNYGLKAFE 480
Query: 117 LFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
F E ++ G D + +++ AC+ +K + + + IH
Sbjct: 481 SFRE-VQLVGMDADPMMIGSLLLACSEVKCVSQVKEIH 517
Score = 60.1 bits (144), Expect = 7e-07
Identities = 39/164 (23%), Positives = 78/164 (47%)
Frame = -2
Query: 495 DTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLSLGKQLH 316
D +WN+++ Y ++G+ + +++ M G+ +++T L A LG ++H
Sbjct: 256 DVVSWNSIVSAYAANGKSMEALKLFREMQKAGLDRNTYTFVASLQACADYSFRKLGMEIH 315
Query: 315 CHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKNSK 136
V+K D YV ++L+ +Y + A F N +K+ ++L G +++N
Sbjct: 316 AAVLKSTQHLDVYVANALISMYVRCCKMSEAVRIF-NELDEKDKVSRNSMLTG-FIQNGM 373
Query: 135 PQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
A+ F + + ++G D V +++ AC L L GR +H
Sbjct: 374 YHEAMYFFHDFL-NAGQKPDQVTIISILVACGRLGYLLNGRELH 416
Score = 58.9 bits (141), Expect = 2e-06
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = -2
Query: 339 LSLGKQLHCHVVK-FGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLL 163
LS G Q+H HV+K + S ++ + L+ +YG I+ A+ F + + + W +
Sbjct: 104 LSQGLQIHAHVIKSWSVSESVFLGTKLVFMYGKCGSIENAEQVFD--QMGQRSIFTWNAM 161
Query: 162 AGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
G YV N +P A++ + +M G ++D F +++ A +LK+LR G IH
Sbjct: 162 IGAYVSNGEPLGALETYKQM-RVLGVSLDAYTFPSLLKASRLLKNLRLGTEIH 213
>ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 617
Score = 114 bits (284), Expect = 4e-23
Identities = 61/173 (35%), Positives = 96/173 (55%)
Frame = -2
Query: 522 QFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILG 343
+ FD +P RD FAWN LI+ Y + G + +Y+ + L GV PD++T P VL + +L
Sbjct: 6 KLFDQMPQRDVFAWNTLIRGYSNLGPCQESIFLYKELHLQGVLPDNYTFPFVLRSCSVLS 65
Query: 342 NLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLL 163
L G+++HC+++K GF SD +V SSL+ LY ++ F R N V+WT +
Sbjct: 66 ALKEGREIHCNIIKHGFESDVFVQSSLISLYAQSGETLDSELVFDQMRV--RNIVSWTAM 123
Query: 162 AGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
YV+N + + +F +M++ SG + + +V+ ACA L L G IH
Sbjct: 124 IAGYVQNGIHEKGLGVFLKMVD-SGTLPNAITLVSVLPACARLDCLDLGMLIH 175
Score = 81.3 bits (199), Expect = 3e-13
Identities = 52/172 (30%), Positives = 87/172 (50%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
FD + +R+ +W +I Y+ +G + V+ +M+ G P++ TL VL A L L
Sbjct: 109 FDQMRVRNIVSWTAMIAGYVQNGIHEKGLGVFLKMVDSGTLPNAITLVSVLPACARLDCL 168
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
LG +H + +K G +D + ++L+ YG +D A F + +++ V+W +
Sbjct: 169 DLGMLIHGYSIKLGVETDVSLVNALVAFYGKCGLVDVAWSLFDQMK--EHSVVSWNAIIA 226
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIHQ 1
Y +N I LF M++ G D + TVISACA L +L G+ IH+
Sbjct: 227 AYEQNDVSS-TIKLFHRMLDQ-GVEFDYITVVTVISACARLGALGTGKWIHE 276
>ref|XP_006423843.1| hypothetical protein CICLE_v10029811mg [Citrus clementina]
gi|557525777|gb|ESR37083.1| hypothetical protein
CICLE_v10029811mg [Citrus clementina]
Length = 593
Score = 112 bits (280), Expect = 1e-22
Identities = 57/122 (46%), Positives = 78/122 (63%)
Frame = -2
Query: 369 VLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDK 190
VL A R GNL G Q+H K FS+D V S+LL+LYG LD ID+AKW F +
Sbjct: 62 VLTAPRFSGNLFFGNQVHGQAFKLAFSADHCVISALLDLYGRLDSIDSAKWVFVKSVKST 121
Query: 189 NNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRR 10
+N+V WT+LA LY+ ++ LA+DLF +M+ +D VA AT + AC +LKS++EGR+
Sbjct: 122 SNSVCWTILARLYLMQNQRSLALDLFHQMVNLDA-YVDRVALATAVGACRLLKSMQEGRK 180
Query: 9 IH 4
H
Sbjct: 181 AH 182
>ref|XP_006427149.1| hypothetical protein CICLE_v10024866mg [Citrus clementina]
gi|557529139|gb|ESR40389.1| hypothetical protein
CICLE_v10024866mg [Citrus clementina]
Length = 877
Score = 107 bits (268), Expect = 3e-21
Identities = 58/172 (33%), Positives = 99/172 (57%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
FDG+P RD +WN +I Y +GE + ++ M + V PD TL V++AS +LG+
Sbjct: 253 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELLGDE 312
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
LG+++H +V+K GFS D V + L+++Y + + F +R + + V+WT +
Sbjct: 313 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF--SRMESKDVVSWTTMIS 370
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIHQ 1
Y + P A++ ++M+E G+ D + A+V+SACA L +L G ++HQ
Sbjct: 371 CYEGSVLPDKAVET-YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 421
Score = 89.0 bits (219), Expect = 1e-15
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Frame = -2
Query: 498 RDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLG-VKPDSHTLPRVLAASRILGNLSLGKQ 322
RD F+WN LI Y +G + S+YQRM +G VKPD +T P VL + +L GK+
Sbjct: 157 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 216
Query: 321 LHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKN 142
+H HV++FG+ +D V ++L+ +Y + A+ F K + ++W + Y +N
Sbjct: 217 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG--MPKRDRISWNAMISGYFEN 274
Query: 141 SKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
+ + LF M E + D + ++VISA +L + GR +H
Sbjct: 275 GEYMKGLMLFIMMREVLVDP-DFMTLSSVISASELLGDEKLGREVH 319
Score = 80.1 bits (196), Expect = 6e-13
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Frame = -2
Query: 537 QKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAA 358
+++ + F + +D +W +I Y S P + YQ M G PD T+ VL+A
Sbjct: 347 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 406
Query: 357 SRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTV 178
LGNL LG +LH ++ G S + ++L+++Y ID A F + N +
Sbjct: 407 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH--QIPDKNVI 464
Query: 177 AWT-LLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
+WT ++ GL + N + I M+ N++ +V +++SACA + +L G+ IH
Sbjct: 465 SWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLV---SILSACARIGALMCGKEIH 520
Score = 73.6 bits (179), Expect = 6e-11
Identities = 50/189 (26%), Positives = 94/189 (49%)
Frame = -2
Query: 582 FSCCKCSSQMGDKQTQKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLL 403
+S CKC DK + F IP ++ +W ++I + + ++ R ++L
Sbjct: 442 YSKCKCI----DKALE-----VFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMML 491
Query: 402 GVKPDSHTLPRVLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAA 223
+KP+S TL +L+A +G L GK++H H ++ G + D ++ ++LL++Y + A
Sbjct: 492 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 551
Query: 222 KWYFKNARFDKNNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISAC 43
F + ++ + AW +L Y + + LA + F +MI+ N D V F ++ AC
Sbjct: 552 WNQFNS---NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKVNP-DEVTFIALLCAC 607
Query: 42 AMLKSLREG 16
+ + EG
Sbjct: 608 SRSGMVTEG 616
>ref|XP_006839028.1| hypothetical protein AMTR_s03531p00004900 [Amborella trichopoda]
gi|548841542|gb|ERN01597.1| hypothetical protein
AMTR_s03531p00004900 [Amborella trichopoda]
Length = 392
Score = 107 bits (267), Expect = 4e-21
Identities = 57/170 (33%), Positives = 95/170 (55%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
F G RD +WN LI Y G + +++ ML GV PD T P +L++ +G+L
Sbjct: 201 FVGTYHRDNISWNGLISGYSREGLSEEAMNLFIEMLKHGVAPDDFTFPSILSSCASIGSL 260
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
+LG Q+HC + G SD +V+++++++Y +++A + F NT++WT L
Sbjct: 261 ALGMQVHCKTIHCGLESDVFVSNAIIDMYAKCGSLESAMFVFNER--SNLNTISWTALIA 318
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRI 7
Y +N + AI LF M++ S D V FA+V+S+CA L +L G+++
Sbjct: 319 GYAQNGFNEEAIKLFTHMLK-SDFKPDNVTFASVLSSCAGLTALNYGKQV 367
Score = 77.4 bits (189), Expect = 4e-12
Identities = 51/186 (27%), Positives = 97/186 (52%)
Frame = -2
Query: 561 SQMGDKQTQKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSH 382
S++GD + + H F + L D ++N+LI Y G+ +Y + L G++
Sbjct: 87 SKLGDME--EAWHCFEEMGKLGDAVSFNSLIAGYARLGKGELSLVLYVQFLRTGLRISEF 144
Query: 381 TLPRVLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNA 202
T VL+A + L GKQ+H V + GF +V ++++++Y ++++ W
Sbjct: 145 TFVGVLSACAGISGLVEGKQIHALVFRTGFEGHVFVANAVMDMYAKSGELESS-WRVFVG 203
Query: 201 RFDKNNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLR 22
+ ++N ++W L Y + + A++LF EM++H G A D F +++S+CA + SL
Sbjct: 204 TYHRDN-ISWNGLISGYSREGLSEEAMNLFIEMLKH-GVAPDDFTFPSILSSCASIGSLA 261
Query: 21 EGRRIH 4
G ++H
Sbjct: 262 LGMQVH 267
Score = 71.2 bits (173), Expect = 3e-10
Identities = 46/165 (27%), Positives = 83/165 (50%)
Frame = -2
Query: 498 RDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLSLGKQL 319
++ F+W +I Y+ + ++ M G+KP L L AS + G+L+ G Q+
Sbjct: 4 KNQFSWAIMIGGYVRHEYAFEALEMFVDMNRSGLKPHPFALVGALRASVVAGSLNHGLQI 63
Query: 318 HCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKNS 139
H V+K G + V ++LL++Y L ++ A W+ + V++ L Y +
Sbjct: 64 HAVVLKIGVFMEETVRNTLLDVYSKLGDMEEA-WHCFEEMGKLGDAVSFNSLIAGYARLG 122
Query: 138 KPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
K +L++ L+ + + +G I F V+SACA + L EG++IH
Sbjct: 123 KGELSLVLYVQFL-RTGLRISEFTFVGVLSACAGISGLVEGKQIH 166
>emb|CBI36352.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 107 bits (267), Expect = 4e-21
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 6/206 (2%)
Frame = -2
Query: 600 IVSNPYFS------CCKCSSQMGDKQTQKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPT 439
++SNP CCK ++GD + + FD +P + F WNN+I+ Y G P
Sbjct: 47 LISNPIVPAQIIAFCCK--HELGDMEYARM---VFDTMPGPNHFVWNNMIKGYSRVGCPN 101
Query: 438 QVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLL 259
S+Y ML GV PD +T P +L + G++LH H+VK GFSS+ +V ++L+
Sbjct: 102 SAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALI 161
Query: 258 ELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAI 79
LY + + A+ F R K + V W ++ Y ++ + ++ LF EM E
Sbjct: 162 HLYSLSGEVSVARGVFD--RSSKGDVVTWNVMISGYNRSKQFDESMKLFDEM-ERMRVLP 218
Query: 78 DVVAFATVISACAMLKSLREGRRIHQ 1
+ +V+SAC+ LK L G+R+H+
Sbjct: 219 SSITLVSVLSACSKLKDLNVGKRVHR 244
Score = 73.6 bits (179), Expect = 6e-11
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Frame = -2
Query: 579 SCCKCSSQMGDKQTQKQNHQ-FFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLL 403
S S++ D K+ H+ +FD +P RD +W +I YL +V S+++ M
Sbjct: 225 SVLSACSKLKDLNVGKRVHRNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAA 284
Query: 402 GVKPDSHTLPRVLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAA 223
+KPD T+ +L A LG L LG+ + ++ K D++V ++L+++Y ++ A
Sbjct: 285 NIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKA 344
Query: 222 KWYFKNARFDKNNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISAC 43
F + ++WT + N + A+D+F +M++ S +V+ V
Sbjct: 345 IRIFN--AMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVIKNMPVKPNS 402
Query: 42 AMLKSLREGRRIHQ 1
+ SL R+H+
Sbjct: 403 IVWGSLLGACRVHR 416
>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 107 bits (267), Expect = 4e-21
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 6/206 (2%)
Frame = -2
Query: 600 IVSNPYFS------CCKCSSQMGDKQTQKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPT 439
++SNP CCK ++GD + + FD +P + F WNN+I+ Y G P
Sbjct: 47 LISNPIVPAQIIAFCCK--HELGDMEYARM---VFDTMPGPNHFVWNNMIKGYSRVGCPN 101
Query: 438 QVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLL 259
S+Y ML GV PD +T P +L + G++LH H+VK GFSS+ +V ++L+
Sbjct: 102 SAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALI 161
Query: 258 ELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAI 79
LY + + A+ F R K + V W ++ Y ++ + ++ LF EM E
Sbjct: 162 HLYSLSGEVSVARGVFD--RSSKGDVVTWNVMISGYNRSKQFDESMKLFDEM-ERMRVLP 218
Query: 78 DVVAFATVISACAMLKSLREGRRIHQ 1
+ +V+SAC+ LK L G+R+H+
Sbjct: 219 SSITLVSVLSACSKLKDLNVGKRVHR 244
Score = 70.9 bits (172), Expect = 4e-10
Identities = 44/170 (25%), Positives = 83/170 (48%)
Frame = -2
Query: 519 FFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGN 340
+FD +P RD +W +I YL +V S+++ M +KPD T+ +L A LG
Sbjct: 308 YFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGA 367
Query: 339 LSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLA 160
L LG+ + ++ K D++V ++L+++Y ++ A F + ++WT +
Sbjct: 368 LELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFN--AMPHRDKISWTAVI 425
Query: 159 GLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRR 10
N + A+D+F +M++ S D V V+ AC + +G++
Sbjct: 426 FGLAINGYGEEALDMFSQMLKASITP-DEVTCIGVLCACTHSGMVDKGKK 474
>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 483
Score = 107 bits (266), Expect = 5e-21
Identities = 56/176 (31%), Positives = 94/176 (53%)
Frame = -2
Query: 531 QNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASR 352
+ + FDG+ RD +W ++I Y+ +P + ++ ML +GV P++ TL V+ A
Sbjct: 105 ETRRVFDGLYFRDVISWTSMITGYVKGEKPKKALDLFWEMLDVGVDPNAFTLSAVIKACT 164
Query: 351 ILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAW 172
LG L LGK HC ++ GF S+ + S+L++LYG +D A+ F + + + W
Sbjct: 165 DLGTLMLGKCFHCVIMIRGFHSNHVIGSALIDLYGRNYELDDARRLFDELL--EPDAICW 222
Query: 171 TLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
T + Y +N A+ F+ M G A D F TV++AC L+ L++G+ +H
Sbjct: 223 TSVISAYTRNDMYDKALGFFYLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGKEVH 278
Score = 90.5 bits (223), Expect = 5e-16
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Frame = -2
Query: 522 QFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLL-LGVKPDSHTLPRVLAASRIL 346
+ FD + D W ++I Y + + + M LG+ PD T VL A L
Sbjct: 209 RLFDELLEPDAICWTSVISAYTRNDMYDKALGFFYLMQRKLGLAPDGFTFGTVLTACGNL 268
Query: 345 GNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTL 166
L GK++H ++ GFS + V SSL+++YG +D ++ F R N+V+W+
Sbjct: 269 RRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGKCGLVDESQRVFD--RMSVKNSVSWSA 326
Query: 165 LAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
L G + +N + I +F EM G A D+ +F TV+ ACA L ++R+G+ +H
Sbjct: 327 LLGGFCQNGDFESVIRIFREM----GEADDLYSFGTVLRACAGLAAVRQGKEVH 376
Score = 66.2 bits (160), Expect = 1e-08
Identities = 41/164 (25%), Positives = 81/164 (49%)
Frame = -2
Query: 531 QNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASR 352
++ + FD + ++++ +W+ L+ + +G+ V +++ M G D ++ VL A
Sbjct: 308 ESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREM---GEADDLYSFGTVLRACA 364
Query: 351 ILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAW 172
L + GK++HC V+ G D + S+L++LY ID A F + N + W
Sbjct: 365 GLAAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAKCGCIDFAHRIF--TKMTVRNLITW 422
Query: 171 TLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACA 40
+ + +N + A+ +F EM++ G D + F V+ AC+
Sbjct: 423 NSMICGFAQNGWAEEALRIFDEMVK-EGTKPDYITFIGVLFACS 465
Score = 63.5 bits (153), Expect = 6e-08
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Frame = -2
Query: 330 GKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNAR-FDK---NNTVAWTLL 163
G Q+H HVVK G +D +V +SLL LY L + +F+ R FD + ++WT +
Sbjct: 70 GLQIHAHVVKSGLETDRFVGNSLLALYFKL-----STDFFETRRVFDGLYFRDVISWTSM 124
Query: 162 AGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
YVK KP+ A+DLF+EM++ G + + VI AC L +L G+ H
Sbjct: 125 ITGYVKGEKPKKALDLFWEMLD-VGVDPNAFTLSAVIKACTDLGTLMLGKCFH 176
>ref|XP_006465408.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Citrus sinensis]
Length = 879
Score = 106 bits (265), Expect = 6e-21
Identities = 57/172 (33%), Positives = 99/172 (57%)
Frame = -2
Query: 516 FDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAASRILGNL 337
FDG+P RD +WN +I Y +GE + ++ M + V PD TL V++AS ++G+
Sbjct: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
Query: 336 SLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAG 157
LG+++H +V+K GFS D V + L+++Y + + F +R + + V+WT +
Sbjct: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKMF--SRMESKDVVSWTTMIS 372
Query: 156 LYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIHQ 1
Y + P A++ ++M+E G+ D + A+V+SACA L +L G ++HQ
Sbjct: 373 CYEGSMLPDKAVET-YKMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
Score = 87.8 bits (216), Expect = 3e-15
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Frame = -2
Query: 498 RDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLG-VKPDSHTLPRVLAASRILGNLSLGKQ 322
RD F+WN LI Y +G + S+YQRM +G VKPD +T P VL + +L GK+
Sbjct: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
Query: 321 LHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTVAWTLLAGLYVKN 142
+H HV++FG+ +D V ++L+ +Y + A+ F K + ++W + Y +N
Sbjct: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG--MPKRDRISWNAMISGYFEN 276
Query: 141 SKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
+ + LF M E + D + ++VISA ++ + GR +H
Sbjct: 277 GEYMKGLMLFIMMREVLVDP-DFMTLSSVISASELVGDEKLGREVH 321
Score = 79.3 bits (194), Expect = 1e-12
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Frame = -2
Query: 537 QKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLLGVKPDSHTLPRVLAA 358
+++ + F + +D +W +I Y S P + Y+ M G PD T+ VL+A
Sbjct: 349 REEGEKMFSRMESKDVVSWTTMISCYEGSMLPDKAVETYKMMEAEGSMPDEITIASVLSA 408
Query: 357 SRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAAKWYFKNARFDKNNTV 178
LGNL LG +LH ++ G S + ++L+++Y ID A F + N +
Sbjct: 409 CACLGNLDLGIKLHQLAMRTGLISYVIIANTLIDMYSKCKCIDKALEVFH--QIPDKNVI 466
Query: 177 AWT-LLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISACAMLKSLREGRRIH 4
+WT ++ GL + N + I M+ N++ +V +++SACA + +L G+ IH
Sbjct: 467 SWTSIILGLRLNNRSFEALIFFRQMMLNLKPNSVTLV---SILSACARIGALMCGKEIH 522
Score = 73.6 bits (179), Expect = 6e-11
Identities = 49/189 (25%), Positives = 94/189 (49%)
Frame = -2
Query: 582 FSCCKCSSQMGDKQTQKQNHQFFDGIPLRDTFAWNNLIQTYLSSGEPTQVTSVYQRMLLL 403
+S CKC DK + F IP ++ +W ++I + + ++ R ++L
Sbjct: 444 YSKCKCI----DKALE-----VFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRQMML 493
Query: 402 GVKPDSHTLPRVLAASRILGNLSLGKQLHCHVVKFGFSSDAYVTSSLLELYGMLDGIDAA 223
+KP+S TL +L+A +G L GK++H H ++ G + D ++ ++LL++Y + A
Sbjct: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
Query: 222 KWYFKNARFDKNNTVAWTLLAGLYVKNSKPQLAIDLFFEMIEHSGNAIDVVAFATVISAC 43
F + ++ + AW +L Y + + LA + F +MI+ N D + F ++ AC
Sbjct: 554 WNQFNS---NERDVSAWNILLTGYAEQGQGALAEEFFRKMIDSKVNP-DEITFIALLCAC 609
Query: 42 AMLKSLREG 16
+ + EG
Sbjct: 610 SRSGMVTEG 618