BLASTX nr result
ID: Rauwolfia21_contig00046616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00046616
(373 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004244340.1| PREDICTED: uncharacterized protein LOC101262... 48 1e-11
ref|XP_004240295.1| PREDICTED: uncharacterized protein LOC101259... 46 7e-09
ref|XP_004251351.1| PREDICTED: uncharacterized protein LOC101255... 44 2e-08
gb|ABF96902.1| retrotransposon protein, putative, Ty1-copia subc... 54 5e-08
gb|AAT85780.1| zinc knuckle domain containing protein [Oryza sat... 54 5e-08
gb|AAT77826.1| putative Zinc knuckle containing protein [Oryza s... 54 6e-08
emb|CAE01490.1| P0041A24.2 [Oryza sativa Japonica Group] 52 9e-08
ref|XP_004237325.1| PREDICTED: uncharacterized protein LOC101252... 49 9e-08
ref|XP_004246800.1| PREDICTED: uncharacterized protein LOC101267... 62 1e-07
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera] 60 2e-07
emb|CAN82314.1| hypothetical protein VITISV_015643 [Vitis vinifera] 60 2e-07
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 60 2e-07
gb|EOY13645.1| Uncharacterized protein TCM_032267 [Theobroma cacao] 48 3e-07
gb|AAK91877.1|AC091665_3 Putative copia-type polyprotein [Oryza ... 50 4e-07
emb|CAN77289.1| hypothetical protein VITISV_031729 [Vitis vinifera] 60 4e-07
emb|CAE05263.2| OSJNBb0115I09.25 [Oryza sativa Japonica Group] g... 52 4e-07
dbj|BAD45248.1| Zinc knuckle containing protein-like [Oryza sati... 49 6e-07
emb|CAN77859.1| hypothetical protein VITISV_005455 [Vitis vinifera] 59 7e-07
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera] 59 7e-07
emb|CAN75894.1| hypothetical protein VITISV_024509 [Vitis vinifera] 59 7e-07
>ref|XP_004244340.1| PREDICTED: uncharacterized protein LOC101262834 [Solanum
lycopersicum]
Length = 5610
Score = 47.8 bits (112), Expect(2) = 1e-11
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 137 FSLLISPKRIIFSWKLDCHIHLDAMGLTDTIVENNMSSSQERSKVIFF 280
F+ L S R SW LD IHLDAMGL DTI E N +S+Q ++ + F
Sbjct: 2288 FTALQSSGRNYLSWVLDAEIHLDAMGLGDTIKEENKASNQNCARAMIF 2335
Score = 47.4 bits (111), Expect(2) = 1e-11
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +1
Query: 265 KSHFFLRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
++ FLR+H E LK EYLTV +PL+LW L++RFD
Sbjct: 2331 RAMIFLRHHLDEILKIEYLTVKDPLVLWKTLKERFD 2366
>ref|XP_004240295.1| PREDICTED: uncharacterized protein LOC101259752 [Solanum
lycopersicum]
Length = 222
Score = 46.2 bits (108), Expect(2) = 7e-09
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1
Query: 262 LKSHFFLRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
+K+ FLR+H E LK EYLTV +PL LW L++R+D
Sbjct: 44 VKAMIFLRHHLDEGLKIEYLTVKDPLELWTDLKERYD 80
Score = 39.3 bits (90), Expect(2) = 7e-09
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 173 SWKLDCHIHLDAMGLTDTIVENNMSSSQERSKVIFF 280
SW LD IHL A GL TI + N +SSQ++ K + F
Sbjct: 14 SWVLDAEIHLAAKGLDATITQGNEASSQDKVKAMIF 49
>ref|XP_004251351.1| PREDICTED: uncharacterized protein LOC101255763 [Solanum
lycopersicum]
Length = 325
Score = 43.5 bits (101), Expect(2) = 2e-08
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 265 KSHFFLRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
K+ FLR+H E LK EYLTV +PL LW L+ R+D
Sbjct: 59 KAMIFLRFHPDEGLKIEYLTVKDPLELWTDLKGRYD 94
Score = 40.4 bits (93), Expect(2) = 2e-08
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 173 SWKLDCHIHLDAMGLTDTIVENNMSSSQERSKVIFF 280
SW LD IHL A GL TI + N +SSQ+++K + F
Sbjct: 28 SWVLDAEIHLAAKGLDATITQGNEASSQDKAKAMIF 63
>gb|ABF96902.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1370
Score = 53.9 bits (128), Expect(2) = 5e-08
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 265 KSHFFLRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
K+ FLR+H H DLK+EY+T NPL+LW L+DRFD
Sbjct: 173 KALHFLRHHLHPDLKSEYMTEKNPLVLWQSLKDRFD 208
Score = 28.5 bits (62), Expect(2) = 5e-08
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 173 SWKLDCHIHLDAMGLTDTIVENNM----SSSQERSKVIFF 280
+W LD I LD++GL TIV + S+ E++K + F
Sbjct: 138 TWALDVEIKLDSIGLDHTIVLPELGTVESTKAEKAKALHF 177
>gb|AAT85780.1| zinc knuckle domain containing protein [Oryza sativa Japonica
Group]
Length = 1329
Score = 53.9 bits (128), Expect(2) = 5e-08
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 265 KSHFFLRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
K+ FLR+H H DLK+EY+T NPL+LW L+DRFD
Sbjct: 173 KALHFLRHHLHPDLKSEYMTEKNPLVLWQSLKDRFD 208
Score = 28.5 bits (62), Expect(2) = 5e-08
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 173 SWKLDCHIHLDAMGLTDTIVENNM----SSSQERSKVIFF 280
+W LD I LD++GL TIV + S+ E++K + F
Sbjct: 138 TWALDVEIKLDSIGLDHTIVLPELGTVESTKAEKAKALHF 177
>gb|AAT77826.1| putative Zinc knuckle containing protein [Oryza sativa Japonica
Group]
Length = 460
Score = 53.9 bits (128), Expect(2) = 6e-08
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 265 KSHFFLRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
K+ FLR+H H DLK+EY+T NPL+LW L+DRFD
Sbjct: 173 KALHFLRHHLHPDLKSEYMTEKNPLVLWQSLKDRFD 208
Score = 28.5 bits (62), Expect(2) = 6e-08
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 173 SWKLDCHIHLDAMGLTDTIVENNM----SSSQERSKVIFF 280
+W LD I LD++GL TIV + S+ E++K + F
Sbjct: 138 TWALDVEIKLDSIGLDHTIVLPELGTVESTKAEKAKALHF 177
>emb|CAE01490.1| P0041A24.2 [Oryza sativa Japonica Group]
Length = 1376
Score = 52.0 bits (123), Expect(2) = 9e-08
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +1
Query: 265 KSHFFLRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
K+ FLR+H H DLK+EY+T +PL+LW L+DRFD
Sbjct: 56 KALHFLRHHLHPDLKSEYMTEKDPLVLWQSLKDRFD 91
Score = 29.6 bits (65), Expect(2) = 9e-08
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 173 SWKLDCHIHLDAMGLTDTIVENNM----SSSQERSKVIFF 280
+W LD I LD+MGL TIV + S+ E++K + F
Sbjct: 21 TWALDVEIKLDSMGLDHTIVLPKVGTVESTKAEKAKALHF 60
>ref|XP_004237325.1| PREDICTED: uncharacterized protein LOC101252169 [Solanum
lycopersicum]
Length = 255
Score = 48.5 bits (114), Expect(2) = 9e-08
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +1
Query: 265 KSHFFLRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
K+ FL +H E LK EYLTV +PL+LW L+DR+D
Sbjct: 20 KAMIFLLHHLDESLKMEYLTVKDPLVLWNNLKDRYD 55
Score = 33.1 bits (74), Expect(2) = 9e-08
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 209 MGLTDTIVENNMSSSQERSKVIFF 280
MGL DTI ENN +S+Q R+K + F
Sbjct: 1 MGLADTIQENNQASNQNRAKAMIF 24
>ref|XP_004246800.1| PREDICTED: uncharacterized protein LOC101267551 [Solanum
lycopersicum]
Length = 405
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Frame = +1
Query: 112 MANLTNLQFLTFDISEKNYLF----VETRLSHSSRCNGPDRHYCGE*YVFITRTLKSHFF 279
M+N++ L+FL DIS KNYL E L + + + KS F
Sbjct: 1 MSNISKLEFLALDISGKNYLSWALDAEIHLDSVGLADTIQENNQASNH----NRAKSMIF 56
Query: 280 LRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
LR+H E L+ EYLTV +PL+LW KL+DR+D
Sbjct: 57 LRHHLDEGLQIEYLTVKDPLVLWNKLKDRYD 87
>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
Length = 1360
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 112 MANLTNLQFLTFDISEKNYL--FVETRLSHSSRCNGPDRHYCGE*YVFITRTLKSHFFLR 285
M+N+T L+F+ DIS KNYL ++ L + G + + K+ FLR
Sbjct: 1 MSNITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQ--ASLQDRAKALIFLR 58
Query: 286 YHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
+H HE LK EYLTV +P LW L++R+D
Sbjct: 59 HHLHEGLKNEYLTVKDPFTLWSNLKERYD 87
>emb|CAN82314.1| hypothetical protein VITISV_015643 [Vitis vinifera]
Length = 330
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 112 MANLTNLQFLTFDISEKNYL--FVETRLSHSSRCNGPDRHYCGE*YVFITRTLKSHFFLR 285
M+N+T L+F+ DIS KNYL ++ L H N G + K+ FLR
Sbjct: 1 MSNITKLEFVALDISGKNYLSWILDAEL-HLDAMNLXATIKQGN-QASLQDRAKALIFLR 58
Query: 286 YHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
+H HE LK EYLTV +P LW L++R+D
Sbjct: 59 HHLHEGLKNEYLTVKDPFTLWSNLKERYD 87
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 112 MANLTNLQFLTFDISEKNYL--FVETRLSHSSRCNGPDRHYCGE*YVFITRTLKSHFFLR 285
M+N+T L+F+ DIS KNYL ++ L + G + + K+ FLR
Sbjct: 1 MSNITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQ--ASLQDRAKALIFLR 58
Query: 286 YHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
+H HE LK EYLTV +P LW L++R+D
Sbjct: 59 HHLHEGLKNEYLTVKDPFTLWSNLKERYD 87
>gb|EOY13645.1| Uncharacterized protein TCM_032267 [Theobroma cacao]
Length = 247
Score = 47.8 bits (112), Expect(2) = 3e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +2
Query: 173 SWKLDCHIHLDAMGLTDTIVENNMSSSQERSKVIFF 280
SW LD IHLDAMGL DTI E N +S+Q+++K + F
Sbjct: 204 SWILDAEIHLDAMGLGDTIKEENKASNQDKAKAMIF 239
Score = 32.3 bits (72), Expect(2) = 3e-07
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 112 MANLTNLQFLTFDISEKNYL 171
M+NLT L+F+T DI+ KNYL
Sbjct: 184 MSNLTKLEFVTLDITSKNYL 203
>gb|AAK91877.1|AC091665_3 Putative copia-type polyprotein [Oryza sativa]
gi|110288607|gb|ABB46746.2| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 183
Score = 50.1 bits (118), Expect(2) = 4e-07
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +1
Query: 265 KSHFFLRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
K+ FLR+H H +LK+EY+T +PL+LW L+DRFD
Sbjct: 56 KALHFLRHHLHPNLKSEYMTEKDPLVLWQSLKDRFD 91
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 173 SWKLDCHIHLDAMGLTDTIVENNM----SSSQERSKVIFF 280
+W LD I LD+MGL TIV + S+ E++K + F
Sbjct: 21 TWALDVEIKLDSMGLDHTIVLPEVGTVESTKAEKAKALHF 60
>emb|CAN77289.1| hypothetical protein VITISV_031729 [Vitis vinifera]
Length = 193
Score = 59.7 bits (143), Expect = 4e-07
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 112 MANLTNLQFLTFDISEKNYL--FVETRLSHSSRCNGPDRHYCGE*YVFITRTLKSHFFLR 285
M+N+T L+F+T DIS K+YL ++ L + G + + K+ F R
Sbjct: 1 MSNITKLEFMTLDISGKSYLSWILDAELHFDAMNLGATIKQGNQ--ASLQDRAKALIFFR 58
Query: 286 YHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
+H HE LK EYLT+ +P LW L++R+D
Sbjct: 59 HHLHEGLKNEYLTIKDPFTLWSNLKERYD 87
>emb|CAE05263.2| OSJNBb0115I09.25 [Oryza sativa Japonica Group]
gi|38347029|emb|CAD39881.2| OSJNBb0067G11.4 [Oryza
sativa Japonica Group]
Length = 986
Score = 51.6 bits (122), Expect(2) = 4e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 265 KSHFFLRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
K+ FLR+H H DLK EY+T +PL+LW L+DRFD
Sbjct: 56 KAFHFLRHHLHPDLKFEYMTEKDPLVLWQSLKDRFD 91
Score = 27.7 bits (60), Expect(2) = 4e-07
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +2
Query: 173 SWKLDCHIHLDAMGLTDTIVENNM----SSSQERSKVIFF 280
+W LD I LD MGL TIV + S+ E++K F
Sbjct: 21 TWALDVEIKLDYMGLDHTIVLPEVGTVESTKAEKAKAFHF 60
>dbj|BAD45248.1| Zinc knuckle containing protein-like [Oryza sativa Japonica Group]
gi|52076470|dbj|BAD45350.1| Zinc knuckle containing
protein-like [Oryza sativa Japonica Group]
Length = 356
Score = 49.3 bits (116), Expect(2) = 6e-07
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +1
Query: 265 KSHFFLRYHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
K+ FLR+H H DLK+EY+ +PL+LW L+DRFD
Sbjct: 69 KALHFLRHHLHPDLKSEYMFEKDPLVLWQSLKDRFD 104
Score = 29.6 bits (65), Expect(2) = 6e-07
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 173 SWKLDCHIHLDAMGLTDTIVENNM----SSSQERSKVIFF 280
+W LD I LD+MGL TIV + S+ E++K + F
Sbjct: 34 TWALDVEIKLDSMGLDHTIVLPEVGTVESTKAEKAKALHF 73
>emb|CAN77859.1| hypothetical protein VITISV_005455 [Vitis vinifera]
Length = 343
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 112 MANLTNLQFLTFDISEKNYL--FVETRLSHSSRCNGPDRHYCGE*YVFITRTLKSHFFLR 285
M+N+T L+F+ DIS KNYL ++T L H N G RT K+ FL
Sbjct: 1 MSNITKLEFVALDISGKNYLSWILDTEL-HLDAMNLGATIKQGNQASLQDRT-KALIFLL 58
Query: 286 YHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
+H HE LK EYLTV +P LW L++R D
Sbjct: 59 HHLHESLKNEYLTVKDPSTLWSNLKERHD 87
>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
Length = 1501
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +1
Query: 112 MANLTNLQFLTFDISEKNYL--FVETRLSHSSRCNGPDRHYCGE*YVFITRTLKSHFFLR 285
M+N+T L+F+ DIS KNYL ++ L + G + + K+ FLR
Sbjct: 1 MSNITKLEFVALDISGKNYLSWILDAELHLDAMNLGATIKQGNQ--ASLQDRAKALIFLR 58
Query: 286 YHFHEDLKAEYLTVTNPLILWGKLRDRFD 372
+H HE LK EY TV +P LW L++R+D
Sbjct: 59 HHLHEGLKNEYFTVKDPFTLWSNLKERYD 87
>emb|CAN75894.1| hypothetical protein VITISV_024509 [Vitis vinifera]
Length = 265
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 112 MANLTNLQFLTFDISEKNYL-FVETRLSHSSRCNGPDRHYCGE*YVFITRTLKSHFFLRY 288
M+NLT L+F+ DIS KNYL ++ H N G RT K FLR+
Sbjct: 1 MSNLTKLKFVALDISGKNYLSWIFDVEIHLDAMNLGATIKXGNQASLQDRT-KXLIFLRH 59
Query: 289 HFHEDLKAEYLTVTNPLILWGKLRDRFD 372
H HE K EY+TV +P LW L++R+D
Sbjct: 60 HLHEGFKNEYITVKDPFTLWSNLKERYD 87