BLASTX nr result

ID: Rauwolfia21_contig00045888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00045888
         (648 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-...    69   2e-09
ref|XP_002306546.1| hypothetical protein POPTR_0005s17720g [Popu...    69   2e-09
ref|XP_006383515.1| hypothetical protein POPTR_0005s17720g [Popu...    69   2e-09
emb|CBI19236.3| unnamed protein product [Vitis vinifera]               69   2e-09
emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera]    69   2e-09
ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223...    67   6e-09
ref|XP_006386422.1| cyclin d2 family protein [Populus trichocarp...    66   8e-09
emb|CAN88854.1| D2/4-type cyclin [Populus trichocarpa]                 66   8e-09
gb|EOY15405.1| D2/4-type cyclin [Theobroma cacao]                      64   3e-08
ref|XP_006433861.1| hypothetical protein CICLE_v10001581mg [Citr...    60   5e-07
ref|XP_004237975.1| PREDICTED: cyclin-D4-1-like [Solanum lycoper...    60   7e-07
ref|XP_006338089.1| PREDICTED: cyclin-D2-1-like [Solanum tuberosum]    59   1e-06
gb|EMJ23369.1| hypothetical protein PRUPE_ppa007754mg [Prunus pe...    58   2e-06
ref|XP_006472509.1| PREDICTED: cyclin-D2-1-like [Citrus sinensis]      57   4e-06

>ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-like [Vitis vinifera]
          Length = 325

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 32/55 (58%), Positives = 38/55 (69%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVDNVVLEEFDDGWYHRNHRTDNRNQSFFG 647
           MAPS DCA SSLLC EDNS IFDD        EEF+  W+H+NHR+ N+ +SF G
Sbjct: 1   MAPSFDCAASSLLCGEDNSSIFDDADY-GAAAEEFETAWHHQNHRSRNQEKSFNG 54


>ref|XP_002306546.1| hypothetical protein POPTR_0005s17720g [Populus trichocarpa]
           gi|222855995|gb|EEE93542.1| hypothetical protein
           POPTR_0005s17720g [Populus trichocarpa]
          Length = 337

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 29/54 (53%), Positives = 39/54 (72%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVDNVVLEEFDDGWYHRNHRTDNRNQSFF 644
           MAPS DC VSSLLCAEDN+ IFDD+   +  +EEF+  W+H NH+  N+N  ++
Sbjct: 1   MAPSFDCTVSSLLCAEDNNSIFDDNDCYDATVEEFEATWHHGNHQIQNQNSGWW 54


>ref|XP_006383515.1| hypothetical protein POPTR_0005s17720g [Populus trichocarpa]
           gi|159025709|emb|CAN88855.1| D2/4-type cyclin [Populus
           trichocarpa] gi|550339187|gb|ERP61312.1| hypothetical
           protein POPTR_0005s17720g [Populus trichocarpa]
          Length = 319

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 29/54 (53%), Positives = 39/54 (72%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVDNVVLEEFDDGWYHRNHRTDNRNQSFF 644
           MAPS DC VSSLLCAEDN+ IFDD+   +  +EEF+  W+H NH+  N+N  ++
Sbjct: 1   MAPSFDCTVSSLLCAEDNNSIFDDNDCYDATVEEFEATWHHGNHQIQNQNSGWW 54


>emb|CBI19236.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 32/55 (58%), Positives = 38/55 (69%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVDNVVLEEFDDGWYHRNHRTDNRNQSFFG 647
           MAPS DCA SSLLC EDNS IFDD        EEF+  W+H+NHR+ N+ +SF G
Sbjct: 1   MAPSFDCAASSLLCGEDNSSIFDDADY-GAAAEEFETAWHHQNHRSRNQEKSFNG 54


>emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera]
          Length = 375

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 32/55 (58%), Positives = 38/55 (69%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVDNVVLEEFDDGWYHRNHRTDNRNQSFFG 647
           MAPS DCA SSLLC EDNS IFDD        EEF+  W+H+NHR+ N+ +SF G
Sbjct: 1   MAPSFDCAASSLLCGEDNSSIFDDADY-GAAAEEFETAWHHQNHRSRNQEKSFNG 54


>ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223547100|gb|EEF48597.1|
           cyclin d, putative [Ricinus communis]
          Length = 354

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVDNV----VLEEFDDGWYHRNHRTDNRNQSF 641
           MAPS DCAVSSLLCAEDN  IFDDD   +     V++EF+  W+H NHR +++++ F
Sbjct: 1   MAPSFDCAVSSLLCAEDNISIFDDDNNKDYCYGDVVDEFEGSWHHGNHRINHQDRGF 57


>ref|XP_006386422.1| cyclin d2 family protein [Populus trichocarpa]
           gi|359359232|gb|AEV41134.1| D2/4-type cyclin [Populus x
           canadensis] gi|550344699|gb|ERP64219.1| cyclin d2 family
           protein [Populus trichocarpa]
          Length = 353

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVDNVVLEEFDDGWYHRNHRTDNRN 632
           MAPS DCAVS+LLCAEDN+ IFDD+   +  +EEF+  W+H NH+  N+N
Sbjct: 1   MAPSFDCAVSNLLCAEDNNSIFDDNDHYDATVEEFEATWHHGNHQICNQN 50


>emb|CAN88854.1| D2/4-type cyclin [Populus trichocarpa]
          Length = 361

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVDNVVLEEFDDGWYHRNHRTDNRN 632
           MAPS DCAVS+LLCAEDN+ IFDD+   +  +EEF+  W+H NH+  N+N
Sbjct: 1   MAPSFDCAVSNLLCAEDNNSIFDDNDHYDATVEEFEATWHHGNHQICNQN 50


>gb|EOY15405.1| D2/4-type cyclin [Theobroma cacao]
          Length = 356

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 33/57 (57%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVD--NVVLEEFDDGWYHRNHRTDNRNQSFFG 647
           MAPS DCAVSSLLCAEDNS IFDD+        +EEF   W HR +R  N+N+ F G
Sbjct: 1   MAPSFDCAVSSLLCAEDNSSIFDDNECCGWGAEVEEFGAAWNHRYYRNSNQNRVFNG 57


>ref|XP_006433861.1| hypothetical protein CICLE_v10001581mg [Citrus clementina]
           gi|557535983|gb|ESR47101.1| hypothetical protein
           CICLE_v10001581mg [Citrus clementina]
          Length = 366

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVDNVVLEEF--DDGWYHRNHRTDNRNQSF 641
           MAPS DC VSSLLCAE++S +FDD  ++  V++EF  D  W+H N+RT +R++ F
Sbjct: 1   MAPSFDCVVSSLLCAEEDSSVFDD--INGSVVDEFENDATWHHGNNRTQHRSRRF 53


>ref|XP_004237975.1| PREDICTED: cyclin-D4-1-like [Solanum lycopersicum]
          Length = 355

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 33/58 (56%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIF--DDDGVDNVVLEEF--DDGWYHRNHRTDNRNQSFF 644
           MAPS+DCAVSSLLCAEDNS IF  +DD V    +EE   +D WY R HR    N+  F
Sbjct: 1   MAPSMDCAVSSLLCAEDNSSIFCNEDDDVGFGFVEEVVGEDIWYPRIHRNGQENRKLF 58


>ref|XP_006338089.1| PREDICTED: cyclin-D2-1-like [Solanum tuberosum]
          Length = 356

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIF--DDDGVDNVVLEEFDDGWYHRNHRTDNRNQSFF 644
           MAPS+DCA+SSLLCAEDNS IF  +DD V    +EE  D WY R HR    N+  F
Sbjct: 1   MAPSMDCAISSLLCAEDNSSIFCNEDDDVGFGFVEE--DIWYPRIHRNGQENRKLF 54


>gb|EMJ23369.1| hypothetical protein PRUPE_ppa007754mg [Prunus persica]
          Length = 356

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVDNVVLEEFDDG-WYHRNHRTDNRNQSF 641
           MAPS DC VSSLLCAEDN  IFDD+   +V LEE ++  W  RNHR  ++N+ F
Sbjct: 1   MAPSFDCTVSSLLCAEDN--IFDDNDFGSVRLEECEEAMWPLRNHRNYHQNRGF 52


>ref|XP_006472509.1| PREDICTED: cyclin-D2-1-like [Citrus sinensis]
          Length = 366

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
 Frame = +3

Query: 483 MAPSLDCAVSSLLCAEDNSVIFDDDGVDNVVLEEF--DDGWYHRNHRTDNRNQSF 641
           MAPS D AVSSLLCAE++S +FDD  ++  V++EF  D  W+H N+RT +R++ F
Sbjct: 1   MAPSFDYAVSSLLCAEEDSSVFDD--INGSVVDEFENDATWHHGNNRTQHRSRRF 53


Top