BLASTX nr result

ID: Rauwolfia21_contig00045866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00045866
         (558 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25674.3| unnamed protein product [Vitis vinifera]               61   2e-07
ref|XP_002529002.1| ribosome biogenesis protein bop1, putative [...    59   8e-07

>emb|CBI25674.3| unnamed protein product [Vitis vinifera]
          Length = 706

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +2

Query: 2   HFKTVSSVEWHRKGDYFSTLMPADILFPVLFMLV 103
           HFKTVSSVEWHRKGDY ST+MPADIL  +LF ++
Sbjct: 504 HFKTVSSVEWHRKGDYLSTVMPADILLMILFSIL 537


>ref|XP_002529002.1| ribosome biogenesis protein bop1, putative [Ricinus communis]
           gi|223531542|gb|EEF33372.1| ribosome biogenesis protein
           bop1, putative [Ricinus communis]
          Length = 735

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = +2

Query: 2   HFKTVSSVEWHRKGDYFSTLMPADILFPVL 91
           HFKTVSSVEWHRKGDYF TLMPADIL  +L
Sbjct: 516 HFKTVSSVEWHRKGDYFCTLMPADILLLIL 545


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