BLASTX nr result
ID: Rauwolfia21_contig00045649
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00045649
(351 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19924.3| unnamed protein product [Vitis vinifera] 116 3e-24
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi... 116 3e-24
gb|EMJ02994.1| hypothetical protein PRUPE_ppa003245mg [Prunus pe... 103 2e-20
ref|XP_006356336.1| PREDICTED: pentatricopeptide repeat-containi... 96 6e-18
ref|XP_002302207.1| pentatricopeptide repeat-containing family p... 95 8e-18
ref|XP_004237749.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
gb|EOY16503.1| Tetratricopeptide repeat (TPR)-like superfamily p... 94 1e-17
ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_004298070.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,... 88 1e-15
ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_006434326.1| hypothetical protein CICLE_v10000445mg [Citr... 87 2e-15
ref|XP_004502560.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_006395548.1| hypothetical protein EUTSA_v10003744mg [Eutr... 86 5e-15
ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
gb|ESW09498.1| hypothetical protein PHAVU_009G132500g [Phaseolus... 85 9e-15
ref|XP_006290673.1| hypothetical protein CARUB_v10016766mg [Caps... 83 4e-14
ref|NP_189286.1| pentatricopeptide repeat-containing protein [Ar... 80 4e-13
ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group] g... 79 6e-13
ref|XP_004978003.1| PREDICTED: pentatricopeptide repeat-containi... 79 6e-13
>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 116 bits (291), Expect = 3e-24
Identities = 54/87 (62%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+S+KY IIPRLEHY+SMIELYGR+GF+D+LE+F+K+MPFEPT MLTRV C +HGH
Sbjct: 621 SMSNKYCIIPRLEHYESMIELYGRHGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHS 680
Query: 183 RLGQWAANHPNRSN-I*AFHFKFMCKS 260
RLG+WAA N N FHF+ + +S
Sbjct: 681 RLGKWAAEQLNELNPSTPFHFQILDRS 707
>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 116 bits (291), Expect = 3e-24
Identities = 54/87 (62%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+S+KY IIPRLEHY+SMIELYGR+GF+D+LE+F+K+MPFEPT MLTRV C +HGH
Sbjct: 621 SMSNKYCIIPRLEHYESMIELYGRHGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHS 680
Query: 183 RLGQWAANHPNRSN-I*AFHFKFMCKS 260
RLG+WAA N N FHF+ + +S
Sbjct: 681 RLGKWAAEQLNELNPSTPFHFQILDRS 707
>gb|EMJ02994.1| hypothetical protein PRUPE_ppa003245mg [Prunus persica]
Length = 589
Score = 103 bits (258), Expect = 2e-20
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S++++Y IIPRLEHY+ MIELY ++G++D+LENF+K MPF+PT MLTRVL+ C++HG L
Sbjct: 518 SMTNEYGIIPRLEHYECMIELYSQWGYMDELENFVKNMPFDPTVPMLTRVLDACRRHGCL 577
Query: 183 RLGQWAANHPN 215
RLGQWAA N
Sbjct: 578 RLGQWAAQRLN 588
>ref|XP_006356336.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Solanum tuberosum]
Length = 698
Score = 95.5 bits (236), Expect = 6e-18
Identities = 41/71 (57%), Positives = 57/71 (80%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
SLS Y+IIP+LEHY+SMI+LYG +GF D+LE+F++KMPF+PTA ML RV + +++ +
Sbjct: 624 SLSQDYFIIPQLEHYESMIKLYGLHGFFDELEDFVEKMPFQPTAPMLARVFDSSKEYNNT 683
Query: 183 RLGQWAANHPN 215
RLG+WA H N
Sbjct: 684 RLGKWAVRHLN 694
>ref|XP_002302207.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222843933|gb|EEE81480.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 709
Score = 95.1 bits (235), Expect = 8e-18
Identities = 43/67 (64%), Positives = 55/67 (82%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+SSKY IIPRLEHY+ +IEL RYG + +LENF+K MPF+PTA MLTRV++ C++H
Sbjct: 618 SMSSKYCIIPRLEHYECIIELLSRYGCMKELENFIKDMPFDPTAPMLTRVVDACKEHQCW 677
Query: 183 RLGQWAA 203
RLG+WAA
Sbjct: 678 RLGEWAA 684
>ref|XP_004237749.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Solanum lycopersicum]
Length = 698
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/71 (57%), Positives = 57/71 (80%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
SLS Y+IIP+LEHY+SMI+LYG +GF D+LE+F++KMPF+PTA ML RV + +++ +
Sbjct: 624 SLSQDYFIIPQLEHYESMIKLYGLHGFFDELEDFVEKMPFQPTAPMLGRVFDSSKEYNNT 683
Query: 183 RLGQWAANHPN 215
RLG+WA H N
Sbjct: 684 RLGKWAVRHLN 694
>gb|EOY16503.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 731
Score = 94.4 bits (233), Expect = 1e-17
Identities = 41/74 (55%), Positives = 54/74 (72%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+S+ Y IIPRLEHY MIE+Y R G + +LE F+K +PFEPT MLTRV + C++HG +
Sbjct: 641 SMSNDYCIIPRLEHYDCMIEIYSRCGCMKELEKFIKSLPFEPTVAMLTRVFDACEKHGAV 700
Query: 183 RLGQWAANHPNRSN 224
R G+WAA N+ N
Sbjct: 701 RFGEWAAEQHNQLN 714
>ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
gi|449521874|ref|XP_004167954.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
Length = 697
Score = 93.6 bits (231), Expect = 2e-17
Identities = 38/74 (51%), Positives = 53/74 (71%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+S K+ +IPRLEHY+ M+ELYG++G +D+LE F+ MPF+PT ML R+ C++HGH
Sbjct: 621 SMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPFDPTVPMLERIFNACREHGHS 680
Query: 183 RLGQWAANHPNRSN 224
RL +W A N N
Sbjct: 681 RLAEWVAIRLNEQN 694
>ref|XP_004298070.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Fragaria vesca subsp. vesca]
Length = 693
Score = 92.0 bits (227), Expect = 7e-17
Identities = 38/71 (53%), Positives = 56/71 (78%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+S+ Y I+PRLEHY+ MI+LY + G++D+LE+F++ MPF+PT MLTRV++ C++HG L
Sbjct: 622 SMSTDYGIVPRLEHYECMIDLYSQCGYMDELESFVRTMPFDPTVPMLTRVVDACKRHGCL 681
Query: 183 RLGQWAANHPN 215
R G+WA N
Sbjct: 682 RFGKWAVQRLN 692
>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 718
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+S K +IPRLEHY+ MIEL+ RY + +LENF+K MPF+PTA+ML RV + C++HG
Sbjct: 618 SMSDKCCVIPRLEHYECMIELFSRYRCMSRLENFVKGMPFDPTASMLIRVFDACKEHGPS 677
Query: 183 RLGQWAANHPNRSN 224
R +W A N+ N
Sbjct: 678 RFRKWVAEQLNKLN 691
>ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
Length = 1390
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+ KY IIP+LEHY+ MI+LY RYG++ +LE+F+ +MPF PT ML ++ + C+++G+
Sbjct: 616 SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 675
Query: 183 RLGQWAANHPNRSNI*A-FHFK 245
LG+WAA N N A F FK
Sbjct: 676 TLGEWAARRLNELNPWAPFQFK 697
>ref|XP_006434326.1| hypothetical protein CICLE_v10000445mg [Citrus clementina]
gi|557536448|gb|ESR47566.1| hypothetical protein
CICLE_v10000445mg [Citrus clementina]
Length = 706
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+ KY IIP+LEHY+ MI+LY RYG++ +LE+F+ +MPF PT ML ++ + C+++G+
Sbjct: 616 SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 675
Query: 183 RLGQWAANHPNRSNI*A-FHFK 245
LG+WAA N N A F FK
Sbjct: 676 MLGEWAARRLNELNPWAPFQFK 697
>ref|XP_004502560.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cicer arietinum]
Length = 682
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFM---KKMPFEPTATMLTRVLEFCQQH 173
S+S++Y+++PRLEHY SMIELY R+G++D+LENFM K M EPT +ML R L+ CQ+H
Sbjct: 605 SMSNEYHVVPRLEHYDSMIELYSRHGYMDELENFMKTLKTMTIEPTLSMLERALDACQKH 664
Query: 174 GHLRLGQWAANHPN 215
LG W A N
Sbjct: 665 ESPSLGSWIAEKIN 678
>ref|XP_006395548.1| hypothetical protein EUTSA_v10003744mg [Eutrema salsugineum]
gi|557092187|gb|ESQ32834.1| hypothetical protein
EUTSA_v10003744mg [Eutrema salsugineum]
Length = 690
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/67 (55%), Positives = 50/67 (74%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+S+KY I+P++EHY M+ELY +YG L QLE F+ MPF+PT MLTR+ + CQ +G
Sbjct: 619 SMSTKYLILPQVEHYDCMVELYCKYGCLHQLEEFLLLMPFDPTIQMLTRIFDACQNYGWK 678
Query: 183 RLGQWAA 203
+LG WAA
Sbjct: 679 KLGAWAA 685
>ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Glycine max]
Length = 698
Score = 85.5 bits (210), Expect = 7e-15
Identities = 37/71 (52%), Positives = 53/71 (74%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+SS+++++PR+EHY MIELY R+ ++D+LENFM+ M EPT ML RVL+ CQ++
Sbjct: 624 SMSSEFHVLPRMEHYDCMIELYSRHRYMDELENFMRTMTMEPTLPMLKRVLDVCQKNECP 683
Query: 183 RLGQWAANHPN 215
RLG+W A N
Sbjct: 684 RLGEWIAEKIN 694
>gb|ESW09498.1| hypothetical protein PHAVU_009G132500g [Phaseolus vulgaris]
Length = 693
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
SLSSKY+++PRLEHY MIELY R+G + +L+NFM+ M EPT ML RVL+ CQ++
Sbjct: 619 SLSSKYHVLPRLEHYNCMIELYIRHGSMHELDNFMRTMTIEPTLPMLERVLDACQKNEWA 678
Query: 183 RLGQWAANHPN 215
RLG+W N
Sbjct: 679 RLGEWITEKIN 689
>ref|XP_006290673.1| hypothetical protein CARUB_v10016766mg [Capsella rubella]
gi|565465522|ref|XP_006290674.1| hypothetical protein
CARUB_v10016766mg [Capsella rubella]
gi|482559380|gb|EOA23571.1| hypothetical protein
CARUB_v10016766mg [Capsella rubella]
gi|482559381|gb|EOA23572.1| hypothetical protein
CARUB_v10016766mg [Capsella rubella]
Length = 693
Score = 82.8 bits (203), Expect = 4e-14
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+SSKY I+P++EHY M+ELY +YG L LE F+ MPF+P MLTR+ + CQ++G
Sbjct: 622 SMSSKYLILPQVEHYDCMVELYCKYGCLHHLEEFLLLMPFDPPKQMLTRIYDACQRYGWK 681
Query: 183 RLGQWAA 203
+LG WAA
Sbjct: 682 KLGAWAA 688
>ref|NP_189286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273843|sp|Q9LRV2.1|PP256_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g26540 gi|9293933|dbj|BAB01836.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332643655|gb|AEE77176.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 700
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = +3
Query: 3 SLSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHL 182
S+S+KY+I P++EHY MIELY +YG L QLE F+ MPF+P MLTR+ + CQ++
Sbjct: 622 SMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWS 681
Query: 183 RLGQWAA 203
+LG WAA
Sbjct: 682 KLGAWAA 688
>ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|38344064|emb|CAD40816.2| OSJNBa0006B20.8 [Oryza
sativa Japonica Group] gi|113564425|dbj|BAF14768.1|
Os04g0436800 [Oryza sativa Japonica Group]
gi|116310780|emb|CAH67572.1| H0315A08.2 [Oryza sativa
Indica Group] gi|215704891|dbj|BAG94919.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218194892|gb|EEC77319.1| hypothetical protein
OsI_15984 [Oryza sativa Indica Group]
Length = 717
Score = 79.0 bits (193), Expect = 6e-13
Identities = 33/73 (45%), Positives = 54/73 (73%)
Frame = +3
Query: 6 LSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHLR 185
++ +Y I+PR+EHY+ MIEL G++G++ +LE+F+ MPFEPT M R+ + C+++G+ +
Sbjct: 615 MTDEYNIVPRIEHYECMIELLGKHGYMVELEDFIGHMPFEPTTAMWLRIFDCCREYGNRK 674
Query: 186 LGQWAANHPNRSN 224
LG+ AA N SN
Sbjct: 675 LGERAAQCINDSN 687
>ref|XP_004978003.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Setaria italica]
Length = 713
Score = 79.0 bits (193), Expect = 6e-13
Identities = 32/72 (44%), Positives = 53/72 (73%)
Frame = +3
Query: 6 LSSKYYIIPRLEHYQSMIELYGRYGFLDQLENFMKKMPFEPTATMLTRVLEFCQQHGHLR 185
++ +Y I+PR+EHY+ MIEL G++G++ +LE+F+ MPFEPT M R+ + C+++G+ +
Sbjct: 612 MTDEYSIVPRMEHYECMIELLGKHGYMVELEDFVDHMPFEPTTAMWLRIFDCCREYGNKK 671
Query: 186 LGQWAANHPNRS 221
LG+ AA N S
Sbjct: 672 LGERAAQRINES 683