BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00045637
         (314 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
emb|CBI27235.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...   101   1e-19
ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
ref|XP_002299387.2| pentatricopeptide repeat-containing family p...    99   6e-19
gb|EMJ25188.1| hypothetical protein PRUPE_ppa014757mg [Prunus pe...    98   1e-18
ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citr...    96   6e-18
ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_004487896.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab...    91   2e-16
gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis]      89   6e-16
gb|EOX96826.1| Tetratricopeptide repeat (TPR)-like superfamily p...    89   6e-16
ref|XP_006290586.1| hypothetical protein CARUB_v10016675mg [Caps...    89   6e-16
ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago t...    85   1e-14
gb|ESW10852.1| hypothetical protein PHAVU_009G243400g [Phaseolus...    84   3e-14
ref|XP_006597752.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Ara...    83   4e-14
gb|AAP40452.1| unknown protein [Arabidopsis thaliana]                  83   4e-14

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6   PPFQRQTPP-IQPAAATSATIYVVNTKNPSKPTSEKHSSTSWILELRTQARSNRFQEAIS 182
           P  Q Q PP IQ   A+  T     +K P KPTS   S+ SW+  LR++ RSN F+EAIS
Sbjct: 24  PSLQTQPPPSIQKPTASPLT-----SKTPPKPTSPSRSTASWVDALRSRTRSNDFREAIS 78

Query: 183 TYVQMTAAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
           TY++MT +G +PDNFAFPAVLKA +GL+DL  G QIH + VK G
Sbjct: 79  TYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFG 122


>emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6   PPFQRQTPP-IQPAAATSATIYVVNTKNPSKPTSEKHSSTSWILELRTQARSNRFQEAIS 182
           P  Q Q PP IQ   A+  T     +K P KPTS   S+ SW+  LR++ RSN F+EAIS
Sbjct: 24  PSLQTQPPPSIQKPTASPLT-----SKTPPKPTSPSRSTASWVDALRSRTRSNDFREAIS 78

Query: 183 TYVQMTAAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
           TY++MT +G +PDNFAFPAVLKA +GL+DL  G QIH + VK G
Sbjct: 79  TYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFG 122


>ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Solanum lycopersicum]
          Length = 889

 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/98 (54%), Positives = 72/98 (73%)
 Frame = +3

Query: 21  QTPPIQPAAATSATIYVVNTKNPSKPTSEKHSSTSWILELRTQARSNRFQEAISTYVQMT 200
           Q PP +  + +S T  ++  K   + TSE  SS SWI  LR+Q R N F+EAI TY+QMT
Sbjct: 26  QNPPRKLLSTSSPTSTLIFKKFQQEHTSETPSSASWIDTLRSQVRLNCFKEAIFTYIQMT 85

Query: 201 AAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
           + G++PDNF FPAVLKAATGL+DL++G+QI+G++VK G
Sbjct: 86  SEGVRPDNFVFPAVLKAATGLQDLNLGKQIYGAVVKFG 123


>ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Solanum tuberosum]
          Length = 889

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/98 (52%), Positives = 71/98 (72%)
 Frame = +3

Query: 21  QTPPIQPAAATSATIYVVNTKNPSKPTSEKHSSTSWILELRTQARSNRFQEAISTYVQMT 200
           Q  P +  + +S T  ++      +PTSE  S+ SWI  LR+Q R N F+EAI TY+QMT
Sbjct: 26  QNSPRKLLSTSSPTSTLIFKNFQQEPTSETPSAASWIDALRSQVRLNCFKEAIFTYIQMT 85

Query: 201 AAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
           + G++PDNF FPAVLKAATGL+DL++G+QI+G++VK G
Sbjct: 86  SEGVRPDNFVFPAVLKAATGLQDLNLGKQIYGAVVKFG 123


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score =  101 bits (251), Expect = 1e-19
 Identities = 50/100 (50%), Positives = 66/100 (66%), Gaps = 5/100 (5%)
 Frame = +3

Query: 30  PIQPAAATSATIYVVNTK-----NPSKPTSEKHSSTSWILELRTQARSNRFQEAISTYVQ 194
           P  P  ++SA  + + TK     +P KP S+  S  SWI  LR   RSN F+EAISTYV 
Sbjct: 8   PFSPILSSSAQTHELPTKKFLSHSPPKPISQSRSQASWIESLRFNTRSNLFREAISTYVD 67

Query: 195 MTAAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
           M  +G+ PD++AFP VLKA TGL+DL++G+QIH  +VK G
Sbjct: 68  MILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYG 107


>ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 893

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 49/100 (49%), Positives = 62/100 (62%)
 Frame = +3

Query: 15  QRQTPPIQPAAATSATIYVVNTKNPSKPTSEKHSSTSWILELRTQARSNRFQEAISTYVQ 194
           Q Q PP  P       I +  T +  KP S+   S +WI  +RTQ RS  + EAISTY+ 
Sbjct: 23  QIQQPPTTPKTTPPKPITITTTTSTPKPISD---SRTWIDTIRTQTRSGHYNEAISTYIN 79

Query: 195 MTAAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
           MT +GI+PDNFAFPAVLKA   L DL +G+Q+H  +VK G
Sbjct: 80  MTRSGIRPDNFAFPAVLKAVAALHDLRLGQQVHACVVKFG 119


>ref|XP_002299387.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550347073|gb|EEE84192.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 894

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 50/104 (48%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6   PPFQRQT-PPIQPAAATSATIYVVNTKNPSKPTSEKHSSTSWILELRTQARSNRFQEAIS 182
           P  Q+ T PPI     +S++   +++ +P KP S  HS  SWI  LR+++RSN F+EAIS
Sbjct: 23  PSHQQPTKPPI-----SSSSPKPISSSSP-KPISISHSQASWIESLRSRSRSNLFREAIS 76

Query: 183 TYVQMTAAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
           TY++M  +G+ PDNFAFPAVLKA  G+++L++G+QIH  + K G
Sbjct: 77  TYIEMIGSGVSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFG 120


>gb|EMJ25188.1| hypothetical protein PRUPE_ppa014757mg [Prunus persica]
          Length = 901

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = +3

Query: 78  TKNPSKPTSEKHSSTSWILELRTQARSNRFQEAISTYVQMTAAGIQPDNFAFPAVLKAAT 257
           T +P K  S   +  SWI  LR+Q RSN F+EAI TY++MT +GI PDNFAFPAVLKA T
Sbjct: 49  TTSPPKLLSHSRTPASWIETLRSQTRSNHFREAILTYIEMTLSGIVPDNFAFPAVLKAVT 108

Query: 258 GLRDLHMGRQIHGSIVKLG 314
            L+DL++G+QIH  IVK G
Sbjct: 109 SLQDLNLGKQIHAHIVKFG 127


>ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citrus clementina]
           gi|557551206|gb|ESR61835.1| hypothetical protein
           CICLE_v10014221mg [Citrus clementina]
          Length = 882

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 47/93 (50%), Positives = 64/93 (68%)
 Frame = +3

Query: 36  QPAAATSATIYVVNTKNPSKPTSEKHSSTSWILELRTQARSNRFQEAISTYVQMTAAGIQ 215
           QP A T+ ++ +        P S+  S  SWI  LR+Q RSN+F+EAI +Y++MT + IQ
Sbjct: 23  QPPATTATSLPL--------PGSQTRSKESWIESLRSQTRSNQFREAILSYIEMTRSDIQ 74

Query: 216 PDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
           PDNFAFPAVLKA  G++DL +G+QIH  +VK G
Sbjct: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107


>ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Citrus sinensis]
          Length = 882

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/73 (57%), Positives = 56/73 (76%)
 Frame = +3

Query: 96  PTSEKHSSTSWILELRTQARSNRFQEAISTYVQMTAAGIQPDNFAFPAVLKAATGLRDLH 275
           P S+  S  SWI  LR+Q RSN+F+EAI +Y++MT + IQPDNFAFP+VLKA  G++DL 
Sbjct: 35  PGSQTRSKESWIESLRSQTRSNQFREAILSYIEMTRSDIQPDNFAFPSVLKAVAGIQDLS 94

Query: 276 MGRQIHGSIVKLG 314
           +G+QIH  +VK G
Sbjct: 95  LGKQIHAHVVKYG 107


>ref|XP_004487896.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X1 [Cicer arietinum]
           gi|502085351|ref|XP_004487897.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 872

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 40/77 (51%), Positives = 55/77 (71%)
 Frame = +3

Query: 84  NPSKPTSEKHSSTSWILELRTQARSNRFQEAISTYVQMTAAGIQPDNFAFPAVLKAATGL 263
           +P   ++E HS ++WI  LR+Q +S+ F +AISTY  M  AG+ PDNFAFPAVLKA    
Sbjct: 21  HPPSTSAEPHSPSAWIDRLRSQVQSSSFHQAISTYTNMVTAGVPPDNFAFPAVLKATAAT 80

Query: 264 RDLHMGRQIHGSIVKLG 314
           +DL++G+QIHG + K G
Sbjct: 81  QDLNLGKQIHGHVFKFG 97


>ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein
           ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata]
          Length = 886

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
 Frame = +3

Query: 9   PFQRQTPP-IQPAAATSATIYVVNTKN--PSKPTSEKHSSTSWILELRTQARSNRFQEAI 179
           PF RQ  P +  A  TS T  V +T    PSK  S+ HS   WI  LR++ RSN  +EA+
Sbjct: 19  PFSRQKHPYLLRATPTSVTDDVASTVYGAPSKFISQSHSPEWWIDLLRSKVRSNLLREAV 78

Query: 180 STYVQMTAAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
            TY+ M   GI+PDNFAFPA+LKA   L+D+ +G+QIH  + K G
Sbjct: 79  LTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123


>gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis]
          Length = 877

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
 Frame = +3

Query: 24  TPPIQPAAA--TSATIYVVNTKNPSKPTSEKHSS---TSWILELRTQARSNRFQEAISTY 188
           T P+ P AA   S    VV  +  S+  S+  ++   +SWI  LR+Q R+N F++A+STY
Sbjct: 5   THPLYPLAALPVSPQKQVVERQTESRTQSQSQTNNPQSSWIESLRSQVRNNLFRDAVSTY 64

Query: 189 VQMTAAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
             MT A I PDNFAFP +LKAAT LRDL +GRQIH  + K G
Sbjct: 65  TSMTMA-IPPDNFAFPPILKAATSLRDLSLGRQIHAHVFKFG 105


>gb|EOX96826.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 955

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
 Frame = +3

Query: 30  PIQPAAATS---ATIYVVNTKNPSKPTSEKHSSTSWILELRTQARSNRFQEAISTYVQMT 200
           P+ P++A +     I  + T  P    +   S  SW   LR+  RSNRF +AI TYV M+
Sbjct: 84  PVLPSSAIAPPPTPIPSIQTHQPIPTKTRSLSQGSWTESLRSNTRSNRFHQAILTYVSMS 143

Query: 201 AAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
           ++GI PD+FAFPAVLKA T L DL +G+QIH  ++K G
Sbjct: 144 SSGIPPDHFAFPAVLKAVTALHDLALGKQIHAQVLKFG 181


>ref|XP_006290586.1| hypothetical protein CARUB_v10016675mg [Capsella rubella]
           gi|482559293|gb|EOA23484.1| hypothetical protein
           CARUB_v10016675mg [Capsella rubella]
          Length = 882

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = +3

Query: 9   PFQRQTPP-IQPAAATSATIYVVNTKNPSKPTSEKHSSTSWILELRTQARSNRFQEAIST 185
           PF R  PP +  A +TSATI V     PSK  S+  S   WI  LR++ R++  +EA+ T
Sbjct: 19  PFSRHNPPYLLRATSTSATIAVDGV--PSKLISQSRSPEWWIDSLRSKVRASLLREAVLT 76

Query: 186 YVQMTAAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
           Y+ M   GI+PD FAFPA+LKA   L+D+ +G+QIH  + K G
Sbjct: 77  YIDMIVLGIKPDKFAFPALLKAVADLQDMDLGKQIHAHVYKFG 119


>ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355483916|gb|AES65119.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 874

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = +3

Query: 9   PFQRQTPPIQPAAATSATIYVVNTKNPSKPTSEKHSSTSWILELRTQARSNR-FQEAIST 185
           P    TP    +  TS++     T   +   +E    + W+  LR+Q +S+  F +AIST
Sbjct: 13  PSSIHTPNKHHSPPTSSSAITTTTTTTTTVAAEPRLPSEWVSHLRSQTQSSSTFHQAIST 72

Query: 186 YVQMTAAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
           Y  M  AG+ PDNFAFPAVLKA  G++DL++G+Q+H  + K G
Sbjct: 73  YTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFG 115


>gb|ESW10852.1| hypothetical protein PHAVU_009G243400g [Phaseolus vulgaris]
          Length = 882

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
 Frame = +3

Query: 60  TIYVVNTKNPSKPTS--EKHSSTSWILELRTQARSNRFQEAISTYVQMTAAGIQPDNFAF 233
           T+ +   K+   PT+  E+ S + WI  LR+Q +S+ F++AI+TY  M AA   PDNFAF
Sbjct: 24  TLTIPTPKHSPPPTAAVERRSPSQWIDLLRSQTQSSSFRDAIATYAAMLAAAAAPDNFAF 83

Query: 234 PAVLKAATGLRDLHMGRQIHGSIVKLG 314
           PAVLKAAT + DL +G+Q+H  + K G
Sbjct: 84  PAVLKAATAVHDLSLGKQLHAHVFKFG 110


>ref|XP_006597752.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 880

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 42/96 (43%), Positives = 56/96 (58%)
 Frame = +3

Query: 27  PPIQPAAATSATIYVVNTKNPSKPTSEKHSSTSWILELRTQARSNRFQEAISTYVQMTAA 206
           PP+   ++       +    P   T E+ S + WI  LR+Q  S+ F++AISTY  M AA
Sbjct: 10  PPLPYPSSLQTHPLTLTLPTPPPTTVERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAA 69

Query: 207 GIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
              PDNFAFPAVLKAA  + DL +G+QIH  + K G
Sbjct: 70  PAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFG 105


>ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Arabidopsis thaliana]
           gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
           gi|332646133|gb|AEE79654.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 47/105 (44%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
 Frame = +3

Query: 9   PFQRQTPP-IQPAAATSATIYVVNTKN--PSKPTSEKHSSTSWILELRTQARSNRFQEAI 179
           PF R   P +  A  TSAT  V +  +  PS   S+  S   WI  LR++ RSN  +EA+
Sbjct: 23  PFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAV 82

Query: 180 STYVQMTAAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
            TYV M   GI+PDN+AFPA+LKA   L+D+ +G+QIH  + K G
Sbjct: 83  LTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127


>gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 47/105 (44%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
 Frame = +3

Query: 9   PFQRQTPP-IQPAAATSATIYVVNTKN--PSKPTSEKHSSTSWILELRTQARSNRFQEAI 179
           PF R   P +  A  TSAT  V +  +  PS   S+  S   WI  LR++ RSN  +EA+
Sbjct: 23  PFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAV 82

Query: 180 STYVQMTAAGIQPDNFAFPAVLKAATGLRDLHMGRQIHGSIVKLG 314
            TYV M   GI+PDN+AFPA+LKA   L+D+ +G+QIH  + K G
Sbjct: 83  LTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127