BLASTX nr result
ID: Rauwolfia21_contig00045597
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00045597
(472 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 146 2e-33
gb|AFB73911.1| polyprotein [Citrus sinensis] 142 6e-32
gb|AFB73912.1| polyprotein [Citrus sinensis] 139 3e-31
gb|AFK47227.1| unknown [Lotus japonicus] 134 9e-30
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 134 9e-30
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 134 9e-30
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 132 5e-29
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 130 1e-28
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 129 3e-28
emb|CAJ76058.1| gag protein [Cucumis melo] 113 2e-23
gb|AFK43115.1| unknown [Lotus japonicus] 75 5e-14
gb|EXB99767.1| hypothetical protein L484_023298 [Morus notabilis] 68 1e-09
gb|ABA94368.2| retrotransposon protein, putative, Ty1-copia subc... 68 1e-09
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc... 67 2e-09
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc... 67 2e-09
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc... 67 3e-09
gb|EOY01184.1| Peroxidase 30 [Theobroma cacao] 65 9e-09
emb|CAN81534.1| hypothetical protein VITISV_010602 [Vitis vinifera] 57 3e-06
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 56 6e-06
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 146 bits (369), Expect = 2e-33
Identities = 68/91 (74%), Positives = 82/91 (90%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLH 379
M AKFEI+KFNG NFSL KLK+KA+LRKDNCLAAIS+RP FTDD KW+EM+ +A+A+L+
Sbjct: 1 MAAKFEIEKFNGKNFSLWKLKVKAILRKDNCLAAISERPVDFTDDKKWSEMNEDAMADLY 60
Query: 380 LALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
L++ADG+LSSIEEKKTA EIWDHL +LYEAK
Sbjct: 61 LSIADGVLSSIEEKKTANEIWDHLNRLYEAK 91
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 142 bits (357), Expect = 6e-32
Identities = 69/91 (75%), Positives = 81/91 (89%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLH 379
M AK+EI+KFNG+NFSL K+K+KAVLRK+NCLAAI +RP TDD KWNE+DGNAI++LH
Sbjct: 1 MAAKYEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEITDD-KWNEVDGNAISDLH 59
Query: 380 LALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
LALADG+LSS+ EK TAKEIWD LTKLYEAK
Sbjct: 60 LALADGVLSSVAEKNTAKEIWDTLTKLYEAK 90
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 139 bits (351), Expect = 3e-31
Identities = 68/91 (74%), Positives = 80/91 (87%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLH 379
M AK+EI+KFNG+NFSL K+K+KAVLRK+NCLAAI +RP TDD KWNE+D NAI++LH
Sbjct: 1 MAAKYEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEITDD-KWNEVDSNAISDLH 59
Query: 380 LALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
LALADG+LSS+ EK TAKEIWD LTKLYEAK
Sbjct: 60 LALADGVLSSVAEKNTAKEIWDTLTKLYEAK 90
>gb|AFK47227.1| unknown [Lotus japonicus]
Length = 107
Score = 134 bits (338), Expect = 9e-30
Identities = 68/91 (74%), Positives = 74/91 (81%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLH 379
M AKFEI KF+GSNFSL KLKIKA+LRKDNCL AI RP TDD KW EMD NA+ANLH
Sbjct: 1 MAAKFEIPKFSGSNFSLWKLKIKAILRKDNCLPAIDGRPADITDD-KWKEMDDNAVANLH 59
Query: 380 LALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
LA+AD +LSSI EKKTAKEIWD L +LYE K
Sbjct: 60 LAVADSVLSSIAEKKTAKEIWDTLIQLYEVK 90
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 134 bits (338), Expect = 9e-30
Identities = 67/91 (73%), Positives = 74/91 (81%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLH 379
M AKFEI+KFNG NFSL KLKI+A+LRKDNCL AI RP TD+ KW EMD NA+ANLH
Sbjct: 1 MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRPADITDE-KWKEMDDNAVANLH 59
Query: 380 LALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
LA+AD +LSSI EKKTAKEIWD L KLYE K
Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYEVK 90
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 134 bits (338), Expect = 9e-30
Identities = 67/91 (73%), Positives = 74/91 (81%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLH 379
M AKFEI+KFNG NFSL KLKI+A+LRKDNCL AI RP TD+ KW EMD NA+ANLH
Sbjct: 1 MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRPADITDE-KWKEMDDNAVANLH 59
Query: 380 LALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
LA+AD +LSSI EKKTAKEIWD L KLYE K
Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYEVK 90
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 132 bits (332), Expect = 5e-29
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLH 379
M AKFEI+KFNG FSL KLKI+A+LRKDNCL AI RP TD+ KW EMD NA+ANLH
Sbjct: 1 MAAKFEIEKFNGRKFSLWKLKIRAILRKDNCLDAIDGRPADITDE-KWKEMDDNAVANLH 59
Query: 380 LALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
LA+AD +LSSI EKKTAKEIWD L KLYE K
Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYEVK 90
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 130 bits (328), Expect = 1e-28
Identities = 66/91 (72%), Positives = 73/91 (80%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLH 379
M AKFEI+KFNG NFSL KLKI+A+LRKDNCL AI R TD+ KW EMD NA+ANLH
Sbjct: 1 MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRLADITDE-KWKEMDDNAVANLH 59
Query: 380 LALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
LA+AD +LSSI EKKTAKEIWD L KLYE K
Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYEVK 90
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 129 bits (325), Expect = 3e-28
Identities = 67/91 (73%), Positives = 73/91 (80%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLH 379
M AKFEI KFNGSNFSL KLKIKA+LRKDNCL AI RP TDD K EMD NA+ANLH
Sbjct: 1 MAAKFEIPKFNGSNFSLWKLKIKAILRKDNCLPAIDGRPADITDD-KRKEMDDNAVANLH 59
Query: 380 LALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
LA+AD +LSSI EKKTAK+IWD L +LYE K
Sbjct: 60 LAVADSVLSSIAEKKTAKKIWDTLIQLYEVK 90
>emb|CAJ76058.1| gag protein [Cucumis melo]
Length = 122
Score = 113 bits (283), Expect = 2e-23
Identities = 52/67 (77%), Positives = 56/67 (83%)
Frame = +2
Query: 272 VLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLHLALADGILSSIEEKKTAKEIWDHL 451
+ RKDNCL AI RP TDDNKWNEMDGNA+AN+HLAL D +LSSIEEKK AKEIWDHL
Sbjct: 1 ISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHL 60
Query: 452 TKLYEAK 472
KLYEAK
Sbjct: 61 IKLYEAK 67
>gb|AFK43115.1| unknown [Lotus japonicus]
Length = 97
Score = 74.7 bits (182), Expect(2) = 5e-14
Identities = 41/61 (67%), Positives = 44/61 (72%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLH 379
M AKFEI KF+GSNFSL KLKIKA+LRKDNCL I RP T D K EMD NA+ NL
Sbjct: 1 MAAKFEIPKFSGSNFSLWKLKIKAILRKDNCLPEIDGRPDDTTYD-KRKEMDDNAVTNLP 59
Query: 380 L 382
L
Sbjct: 60 L 60
Score = 28.5 bits (62), Expect(2) = 5e-14
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 381 WHLQMGSCPA*KKRKRQRRFGTTSPNCTR 467
W +Q C +KRK+QRR G S CTR
Sbjct: 62 WQIQF--CRVLQKRKQQRRPGILSSKCTR 88
>gb|EXB99767.1| hypothetical protein L484_023298 [Morus notabilis]
Length = 329
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMD 355
M FEIDKFNGSNF+L K+ ++A+L+KDNC A I +RP T+D K NEMD
Sbjct: 1 MDENFEIDKFNGSNFTLWKMNMQAILQKDNCQAVIEERPQEITNDGKKNEMD 52
>gb|ABA94368.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 375
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +2
Query: 200 MTAKFEIDKFNGS-NFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANL 376
+ +KFE+ KF+G+ NF L ++++K +L + A+ + DD+KW+EM A A +
Sbjct: 5 VVSKFEVVKFDGTRNFVLSQMRLKDLLAQQGISKALEETMPEKMDDDKWDEMKAQAAATI 64
Query: 377 HLALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
L L+D ++ + ++K+ KEIWD L LY +K
Sbjct: 65 RLRLSDFVMYQVMDEKSPKEIWDKLASLYMSK 96
>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 425
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 200 MTAKFEIDKFNGS-NFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANL 376
+ +KFE+ KF+G+ NF L ++++K +L + A+ + D KW EM A A +
Sbjct: 5 VVSKFEVVKFDGTGNFILWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATI 64
Query: 377 HLALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
L+L+D ++ + ++KT KEIWD L LY +K
Sbjct: 65 RLSLSDSVMYPVMDEKTPKEIWDKLASLYMSK 96
>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 424
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +2
Query: 200 MTAKFEIDKFNGS-NFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANL 376
+ +KFE+ KF+G+ NF L ++++K +L + A+ + D KW EM A A +
Sbjct: 5 VVSKFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATI 64
Query: 377 HLALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
L+L+D ++ + ++KT+KEIW LT LY +K
Sbjct: 65 RLSLSDSVMYQVMDEKTSKEIWVKLTSLYMSK 96
>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 415
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +2
Query: 206 AKFEIDKFNGS-NFSL*KLKIKAVLRKDNCLAAISDRPTTFTDDNKWNEMDGNAIANLHL 382
+KFE+ KF+G+ NF L ++++K +L + A+ + D +KWNEM A A + L
Sbjct: 7 SKFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALQETMPEKIDADKWNEMKAQAAATIRL 66
Query: 383 ALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
+L+D ++ + ++K+ KEIWD L L+ +K
Sbjct: 67 SLSDSVMYQVMDEKSPKEIWDKLASLHMSK 96
>gb|EOY01184.1| Peroxidase 30 [Theobroma cacao]
Length = 431
Score = 65.1 bits (157), Expect = 9e-09
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Frame = +2
Query: 101 GIQSSVVVLFTALFT*NSGSSFLLTNLVFVIEAMTAKF----EIDKFNGSNFSL*KLKIK 268
G+ S +L A S ++ +FV+ M KF EI F+G+NF+L KLK+
Sbjct: 124 GVVSCADILAVAA---RDASEYVARGFLFVLIKMAGKFGTKFEIPHFDGTNFALWKLKMH 180
Query: 269 AVLRKDNCLAAIS---DRPTTFTDDNKWNEMDGNAIANLHLALADGILSSIEEKKTAKEI 439
AVL KD C A+S D+P T D ++ E A+ANL LAL D +L ++E + +AK I
Sbjct: 181 AVLVKDGCAVALSTKKDKPEGMT-DKQFAERAEIALANLQLALEDNVLFNMETETSAKGI 239
>emb|CAN81534.1| hypothetical protein VITISV_010602 [Vitis vinifera]
Length = 211
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 200 MTAKFEIDKFNGSNFSL*KLKIKAVLRKDNCLAAISDR 313
M +FEI+KFNGSNF L K+K+KA+LRK+NCL IS+R
Sbjct: 1 MAMEFEIEKFNGSNFGLWKMKMKAILRKENCLETISER 38
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 55.8 bits (133), Expect = 6e-06
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +2
Query: 209 KFEIDKFNGSN-FSL*KLKIKAVLRKDNCLAAISDR---PTTFTDDNKWNEMDGNAIANL 376
KFE++KFNGSN F+L KLK+KA+L + C AI P T K E+ A + +
Sbjct: 412 KFEVEKFNGSNDFTLWKLKMKALLVQQKCAQAIEGEEKLPVGLTAAEK-EEVVSRAHSAI 470
Query: 377 HLALADGILSSIEEKKTAKEIWDHLTKLYEAK 472
L+LAD +L + ++ TA +W L Y+ K
Sbjct: 471 LLSLADEVLREVADETTAVGLWRKLESKYQKK 502