BLASTX nr result

ID: Rauwolfia21_contig00045383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00045383
         (500 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356280.1| PREDICTED: B3 domain-containing protein REM9...    57   3e-06
ref|XP_004237741.1| PREDICTED: B3 domain-containing protein REM9...    57   3e-06

>ref|XP_006356280.1| PREDICTED: B3 domain-containing protein REM9-like [Solanum
           tuberosum]
          Length = 255

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = -1

Query: 347 YLPGTICKAYHITEKTLISLRGPSRKWHEVKLRKHCNNR----ICMKTGWLQFCKSNKVK 180
           ++P   C++  + + T ++L GPS K   V LR  CN       C+  GW  F  SNK+K
Sbjct: 171 HIPTEFCQSNALFQNTTMTLTGPSGKSCPVSLRI-CNGGKTLYACITRGWHDFFSSNKLK 229

Query: 179 RGDVCFFQITRKDTRPSSENIMMDVKVI 96
            GDVC FQ+ R  ++  S +I +DV+V+
Sbjct: 230 VGDVCIFQLDR--SKSDSNSIAIDVRVL 255


>ref|XP_004237741.1| PREDICTED: B3 domain-containing protein REM9-like [Solanum
           lycopersicum]
          Length = 255

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = -1

Query: 347 YLPGTICKAYHITEKTLISLRGPSRKWHEVKLRKHCNNR----ICMKTGWLQFCKSNKVK 180
           ++P   C++  + + T ++L GPS K   V LR  CN       C+  GW  F  SNK+K
Sbjct: 171 HIPTEFCQSNALFQNTTMTLTGPSGKSCPVSLRI-CNGGKTLYACITRGWHDFFSSNKLK 229

Query: 179 RGDVCFFQITRKDTRPSSENIMMDVKVI 96
            GDVC FQ+ R  ++  S +I +DV+V+
Sbjct: 230 VGDVCLFQLDR--SKSDSNSIAIDVRVL 255


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