BLASTX nr result

ID: Rauwolfia21_contig00045199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00045199
         (937 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37462.3| unnamed protein product [Vitis vinifera]               77   9e-12
ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containi...    77   9e-12
gb|EXB75450.1| hypothetical protein L484_002672 [Morus notabilis]      76   2e-11
ref|XP_006354902.1| PREDICTED: pentatricopeptide repeat-containi...    75   3e-11
emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]    75   4e-11
gb|EOY18931.1| Pentatricopeptide repeat (PPR) superfamily protei...    72   2e-10
ref|XP_004238168.1| PREDICTED: pentatricopeptide repeat-containi...    72   3e-10
ref|XP_006599726.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-09
ref|XP_006587448.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-09
ref|XP_003534115.2| PREDICTED: pentatricopeptide repeat-containi...    70   1e-09
gb|ESW24604.1| hypothetical protein PHAVU_004G144600g [Phaseolus...    69   2e-09
ref|XP_004515244.1| PREDICTED: pentatricopeptide repeat-containi...    69   3e-09
gb|EMJ10294.1| hypothetical protein PRUPE_ppa003620mg [Prunus pe...    67   1e-08
gb|EPS66212.1| hypothetical protein M569_08565, partial [Genlise...    67   1e-08
ref|XP_002521864.1| pentatricopeptide repeat-containing protein,...    67   1e-08
ref|XP_004299489.1| PREDICTED: pentatricopeptide repeat-containi...    66   2e-08
ref|XP_006302075.1| hypothetical protein CARUB_v10020058mg [Caps...    65   4e-08
ref|XP_002315827.2| pentatricopeptide repeat-containing family p...    65   5e-08
ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    64   6e-08
ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containi...    64   6e-08

>emb|CBI37462.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 36/40 (90%), Positives = 40/40 (100%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           IGDLQAI++LSEHMRKFYNPAMARRFALNQKR+SM+LRGK
Sbjct: 634 IGDLQAIHKLSEHMRKFYNPAMARRFALNQKRRSMSLRGK 673


>ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Vitis vinifera]
          Length = 709

 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 36/40 (90%), Positives = 40/40 (100%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           IGDLQAI++LSEHMRKFYNPAMARRFALNQKR+SM+LRGK
Sbjct: 670 IGDLQAIHKLSEHMRKFYNPAMARRFALNQKRRSMSLRGK 709


>gb|EXB75450.1| hypothetical protein L484_002672 [Morus notabilis]
          Length = 569

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = +3

Query: 3   AIGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           A+GDL+AI+RLSEHMRKFYNPAMARRFALN+KRKSM+ RGK
Sbjct: 529 AVGDLRAIHRLSEHMRKFYNPAMARRFALNEKRKSMSFRGK 569


>ref|XP_006354902.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Solanum tuberosum]
          Length = 573

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = +3

Query: 3   AIGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           AIGDL+AI++LSEHMR FYNPAMARRFA+NQKR+SMNLRGK
Sbjct: 533 AIGDLRAIHKLSEHMRTFYNPAMARRFAINQKRQSMNLRGK 573


>emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
          Length = 708

 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 35/39 (89%), Positives = 39/39 (100%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRG 122
           IGDLQAI++LSEHMRKFYNPAMARRFALNQKR+SM+LRG
Sbjct: 643 IGDLQAIHKLSEHMRKFYNPAMARRFALNQKRRSMSLRG 681


>gb|EOY18931.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 533

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           IG+LQAI +LS+HMRKFYNPAMARRFAL+QKRKSM LRGK
Sbjct: 494 IGNLQAIQKLSDHMRKFYNPAMARRFALHQKRKSMRLRGK 533


>ref|XP_004238168.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Solanum lycopersicum]
          Length = 457

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   AIGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           AIGDL+AI++LSEHMR FYNPAMARRFA+NQ++KSM LRGK
Sbjct: 417 AIGDLRAIHKLSEHMRTFYNPAMARRFAINQRQKSMKLRGK 457


>ref|XP_006599726.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like isoform X2 [Glycine max]
           gi|571530389|ref|XP_003548320.2| PREDICTED:
           pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 591

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           IGDLQAI+R+SEHMRKFYN  MARR+AL+QKRKSM+LRGK
Sbjct: 552 IGDLQAIHRVSEHMRKFYNHGMARRYALSQKRKSMSLRGK 591


>ref|XP_006587448.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 589

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           IGDLQAI+RLSEHM+KFYN  MARRFAL+QKRKS++LRGK
Sbjct: 550 IGDLQAIHRLSEHMKKFYNHGMARRFALSQKRKSLSLRGK 589


>ref|XP_003534115.2| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 604

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           IGDLQAI+RLSEHM+KFYN  MARRFAL+QKRKS++LRGK
Sbjct: 565 IGDLQAIHRLSEHMKKFYNHGMARRFALSQKRKSLSLRGK 604


>gb|ESW24604.1| hypothetical protein PHAVU_004G144600g [Phaseolus vulgaris]
          Length = 597

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           +GDLQAI+RLSEHMRKFYN  MARR+AL+QKRKSM+LRG+
Sbjct: 558 LGDLQAIHRLSEHMRKFYNHGMARRYALSQKRKSMSLRGR 597


>ref|XP_004515244.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Cicer arietinum]
          Length = 614

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           IGDLQAI++LS+HMRKFYN  MARR+AL+QKRKSM+LRGK
Sbjct: 574 IGDLQAIHKLSDHMRKFYNNPMARRYALSQKRKSMSLRGK 613


>gb|EMJ10294.1| hypothetical protein PRUPE_ppa003620mg [Prunus persica]
          Length = 561

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRG 122
           IGDLQ+I+RLS HMR+FYNP+MARR ALNQKR+SM+LRG
Sbjct: 522 IGDLQSIHRLSGHMRQFYNPSMARRVALNQKRRSMSLRG 560


>gb|EPS66212.1| hypothetical protein M569_08565, partial [Genlisea aurea]
          Length = 472

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 30/40 (75%), Positives = 37/40 (92%)
 Frame = +3

Query: 3   AIGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRG 122
           A+GDL+ I RLSEHMRK YNPAMARRFA++QKR+S++LRG
Sbjct: 433 AVGDLKTIQRLSEHMRKSYNPAMARRFAVSQKRRSLSLRG 472


>ref|XP_002521864.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538902|gb|EEF40500.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 428

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRG 122
           IGDLQ I++LSEHMRK+YN +MARRFALN+KRKSM+ RG
Sbjct: 386 IGDLQTIHKLSEHMRKYYNSSMARRFALNEKRKSMSFRG 424


>ref|XP_004299489.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 492

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLR 119
           IGDLQAI+RLS HM +FYNP+MARRFALNQKR+S++LR
Sbjct: 453 IGDLQAIHRLSRHMSRFYNPSMARRFALNQKRRSVSLR 490


>ref|XP_006302075.1| hypothetical protein CARUB_v10020058mg [Capsella rubella]
           gi|482570785|gb|EOA34973.1| hypothetical protein
           CARUB_v10020058mg [Capsella rubella]
          Length = 569

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 29/40 (72%), Positives = 38/40 (95%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           +G+L+AI++LSEHM+KFYN +MARRFAL++KRKS NLRGK
Sbjct: 530 VGNLKAIHKLSEHMKKFYNHSMARRFALSEKRKSTNLRGK 569


>ref|XP_002315827.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550329540|gb|EEF01998.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 472

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 28/40 (70%), Positives = 38/40 (95%)
 Frame = +3

Query: 6   IGDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           IG+++AI+RLSEHMR F+NP+MARR+ LNQKRKSM++RG+
Sbjct: 433 IGNIRAIHRLSEHMRTFHNPSMARRYVLNQKRKSMSVRGR 472


>ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g73400, mitochondrial-like [Cucumis sativus]
          Length = 559

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +3

Query: 9   GDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           G+L+ I+RLSEHMRKFYN AMARRF+LNQKR S++LRGK
Sbjct: 521 GNLKGIHRLSEHMRKFYNRAMARRFSLNQKRMSVSLRGK 559


>ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Cucumis sativus]
          Length = 559

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +3

Query: 9   GDLQAINRLSEHMRKFYNPAMARRFALNQKRKSMNLRGK 125
           G+L+ I+RLSEHMRKFYN AMARRF+LNQKR S++LRGK
Sbjct: 521 GNLKGIHRLSEHMRKFYNRAMARRFSLNQKRMSVSLRGK 559


Top