BLASTX nr result
ID: Rauwolfia21_contig00043945
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00043945
(837 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containi... 166 1e-38
ref|XP_006351208.1| PREDICTED: pentatricopeptide repeat-containi... 160 4e-37
ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citr... 154 5e-35
ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containi... 153 8e-35
gb|EXB53573.1| hypothetical protein L484_009313 [Morus notabilis] 149 9e-34
ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Popu... 146 8e-33
gb|EOX93207.1| Tetratricopeptide repeat (TPR)-like superfamily p... 146 8e-33
gb|EMJ17708.1| hypothetical protein PRUPE_ppa025580mg, partial [... 146 1e-32
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi... 146 1e-32
ref|XP_006406206.1| hypothetical protein EUTSA_v10020073mg [Eutr... 142 2e-31
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ... 139 1e-30
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi... 139 1e-30
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera] 139 1e-30
ref|NP_188854.1| pentatricopeptide repeat-containing protein [Ar... 138 3e-30
ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ... 137 5e-30
ref|XP_006296991.1| hypothetical protein CARUB_v10012985mg [Caps... 135 1e-29
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi... 133 7e-29
gb|ESW14542.1| hypothetical protein PHAVU_008G290100g [Phaseolus... 130 4e-28
gb|EPS60569.1| hypothetical protein M569_14234, partial [Genlise... 126 1e-26
ref|XP_006576131.1| PREDICTED: pentatricopeptide repeat-containi... 123 7e-26
>ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Solanum lycopersicum]
Length = 835
Score = 166 bits (420), Expect = 1e-38
Identities = 92/180 (51%), Positives = 116/180 (64%)
Frame = +3
Query: 297 HHPCVSAVPSTSPYSQIDPQCSSKDSSPCYFQLSSAQKPKTIRYRLSQLCRKGQLDLARQ 476
H P S++P T D QC+ DS KP+TIR+RLS+LCR+GQ LARQ
Sbjct: 31 HLPNFSSLPLT------DQQCTLTDS-----------KPRTIRFRLSELCRQGQPHLARQ 73
Query: 477 LFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTFSSVLKACA 656
LFD IP+P+TV+WN +IIG++CNN+ +EAI+ YS++K + D YT+SSVLKACA
Sbjct: 74 LFDTIPQPSTVLWNTIIIGFVCNNMPHEAISFYSRLK---HVGSSVCDQYTYSSVLKACA 130
Query: 657 EMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYAXXXXXXXXXXXXXXVERVFNLMPKR 836
E +R+GKAVHCHILRS +P RIV NSLLNMY+ VERVF M KR
Sbjct: 131 ETKLIRVGKAVHCHILRSGIHPSRIVSNSLLNMYSATCLTLNNGSECDLVERVFRTMRKR 190
>ref|XP_006351208.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like, partial [Solanum tuberosum]
Length = 831
Score = 160 bits (406), Expect = 4e-37
Identities = 90/180 (50%), Positives = 114/180 (63%)
Frame = +3
Query: 297 HHPCVSAVPSTSPYSQIDPQCSSKDSSPCYFQLSSAQKPKTIRYRLSQLCRKGQLDLARQ 476
H P S++P T D QC+ DS KP+TIR+RLS+LCR+GQ LARQ
Sbjct: 29 HLPNYSSLPLT------DQQCTLADS-----------KPRTIRFRLSELCRQGQPHLARQ 71
Query: 477 LFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTFSSVLKACA 656
LFD IP+P+TV+WN +IIG++CNN+ +EAI+ YS++K + D Y++SSVLKACA
Sbjct: 72 LFDTIPQPSTVLWNTIIIGFVCNNMPHEAISFYSRLK---HVGSSVCDQYSYSSVLKACA 128
Query: 657 EMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYAXXXXXXXXXXXXXXVERVFNLMPKR 836
E + GKAVHCHILRS +P RIV NSLLNMY+ VERVF M KR
Sbjct: 129 ETKRILEGKAVHCHILRSGIHPSRIVSNSLLNMYSATCFTLDNGSDCDLVERVFRTMRKR 188
>ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citrus clementina]
gi|557531841|gb|ESR43024.1| hypothetical protein
CICLE_v10011066mg [Citrus clementina]
Length = 833
Score = 154 bits (388), Expect = 5e-35
Identities = 85/156 (54%), Positives = 102/156 (65%), Gaps = 10/156 (6%)
Frame = +3
Query: 324 STSPYSQIDPQCSSKDSSPCYFQLSSAQKP------KTIRYRLSQLCRKGQLDLARQLFD 485
S+ P PQ ++ P Q+ S P TIR RLS++C++G+ LARQLFD
Sbjct: 4 SSVPLPLPPPQPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFD 63
Query: 486 EIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEP----DPYTFSSVLKAC 653
I RPTTV+WN +IIG++CNNL YEAI LYSQMK K P D YT+SSVLKAC
Sbjct: 64 SITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK------KSSPYTSCDNYTYSSVLKAC 117
Query: 654 AEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
AE LRIGKAVHCH +R +NP R VYNSLLNMY+
Sbjct: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
Score = 62.0 bits (149), Expect = 3e-07
Identities = 38/103 (36%), Positives = 56/103 (54%)
Frame = +3
Query: 453 GQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTF 632
G D AR++FD T VWN MI GY+ NN EAI L+ Q L + D TF
Sbjct: 277 GCFDFARKIFDICLERNTEVWNTMIGGYVQNNRPVEAIELFIQ---ALELDEIVFDDVTF 333
Query: 633 SSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
S L A + + EL +G+ +H +I+++ IV N+++ MY+
Sbjct: 334 LSALSAVSHLQELDLGQQLHAYIIKNFVALPVIVLNAVIVMYS 376
>ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Citrus sinensis]
Length = 833
Score = 153 bits (386), Expect = 8e-35
Identities = 78/122 (63%), Positives = 91/122 (74%), Gaps = 4/122 (3%)
Frame = +3
Query: 408 KPKTIRYRLSQLCRKGQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMK 587
K TIR RLS++C++G+ LARQLFD I RPTTV+WN +IIG++CNNL YEAI LYSQMK
Sbjct: 38 KTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK 97
Query: 588 CGNILHKFEP----DPYTFSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNM 755
K P D YT+SSVLKACAE LRIGKAVHCH +R +NP R VYNSLLNM
Sbjct: 98 ------KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNM 151
Query: 756 YA 761
Y+
Sbjct: 152 YS 153
Score = 60.1 bits (144), Expect = 1e-06
Identities = 37/103 (35%), Positives = 56/103 (54%)
Frame = +3
Query: 453 GQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTF 632
G D AR++FD T VWN MI GY+ N+ EAI L+ Q L + D TF
Sbjct: 277 GCFDFARKIFDICLERNTEVWNTMIGGYVQNHRPVEAIELFIQ---ALELDEIVFDDVTF 333
Query: 633 SSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
S L A + + EL +G+ +H +I+++ IV N+++ MY+
Sbjct: 334 LSALSAVSHLQELDLGQQLHAYIIKNFVALPVIVLNAVIVMYS 376
Score = 59.3 bits (142), Expect = 2e-06
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +3
Query: 426 YRLSQLCRKGQLDLARQLFDEIPRPTT--VVWNAMIIGYICNNLHYEAIALYSQMKCGNI 599
Y + + G + ARQ+F++ WNAMI GY N L EA + QM +
Sbjct: 470 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM----L 525
Query: 600 LHKFEPDPYTFSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
H P+ T +SVL AC M + +GK +H +R + V SL++MY+
Sbjct: 526 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 579
>gb|EXB53573.1| hypothetical protein L484_009313 [Morus notabilis]
Length = 820
Score = 149 bits (377), Expect = 9e-34
Identities = 83/172 (48%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Frame = +3
Query: 327 TSPYSQIDPQCSSKDSSPCYFQLSSAQKPKT--IRYRLSQLCRKGQLDLARQLFDEIPRP 500
+SP +Q +++ SP S KPKT IR RLS+LC++G+ LARQLFD +PRP
Sbjct: 13 SSPATQTPTTTTTQPPSPTI----SLPKPKTPTIRSRLSKLCQEGKPHLARQLFDTLPRP 68
Query: 501 TTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTFSSVLKACAEMMELRIG 680
TTV+WN +IIG+ICNN +A+ Y+QMK + D YT+SS LKACA+ R+G
Sbjct: 69 TTVLWNTIIIGFICNNFPDDALLFYAQMK--KSAPDTKCDSYTYSSTLKACADTCNARVG 126
Query: 681 KAVHCHILRSETNPGRIVYNSLLNMYAXXXXXXXXXXXXXXVERVFNLMPKR 836
+AVHCH+LR +NP RI+YNSLLNMY+ V +VF+ MPKR
Sbjct: 127 RAVHCHVLRCLSNPSRILYNSLLNMYS-TCLCGCDYSKGDLVRKVFDSMPKR 177
>ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Populus trichocarpa]
gi|550335185|gb|EEE92296.2| hypothetical protein
POPTR_0006s00960g [Populus trichocarpa]
Length = 820
Score = 146 bits (369), Expect = 8e-33
Identities = 76/147 (51%), Positives = 99/147 (67%), Gaps = 4/147 (2%)
Frame = +3
Query: 333 PYSQIDPQCSSKDSSPCYFQLSSAQKPK----TIRYRLSQLCRKGQLDLARQLFDEIPRP 500
P S S+K F++S P +IR RLS+LC++GQ +A QLFD PRP
Sbjct: 12 PLSTPSHDPSNKTQKTSLFRISPPPSPSLKTPSIRSRLSKLCQEGQPHIALQLFDTFPRP 71
Query: 501 TTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTFSSVLKACAEMMELRIG 680
TTV+ N +IIG+ICNNL EAI YS++K ++ KF D YT+SS LKACAE L+IG
Sbjct: 72 TTVICNTIIIGFICNNLPLEAILFYSKLKSSSLGTKF--DSYTYSSTLKACAETRSLKIG 129
Query: 681 KAVHCHILRSETNPGRIVYNSLLNMYA 761
+A+HCH++R +NP RIVYNSLLNMY+
Sbjct: 130 RAIHCHLIRCLSNPSRIVYNSLLNMYS 156
>gb|EOX93207.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 923
Score = 146 bits (369), Expect = 8e-33
Identities = 76/151 (50%), Positives = 99/151 (65%)
Frame = +3
Query: 309 VSAVPSTSPYSQIDPQCSSKDSSPCYFQLSSAQKPKTIRYRLSQLCRKGQLDLARQLFDE 488
++A P+ +P+ + + SSP + + TIR RLSQLC++G LARQ+FD
Sbjct: 115 IAAAPNNNPFHALSHSSQTIISSP---PPNPTLRTPTIRSRLSQLCQQGHPHLARQIFDT 171
Query: 489 IPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTFSSVLKACAEMME 668
I P TV+WN ++IG+ICNN+ EA+ YS MK N + D YT+SSVLKACA +
Sbjct: 172 IAEPKTVLWNTIVIGFICNNMPQEALLFYSHMK--NSSPHTKCDSYTYSSVLKACALLRN 229
Query: 669 LRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
LRIGKAVHCH +R TNP RIVYN+LLN YA
Sbjct: 230 LRIGKAVHCHFIRGLTNPSRIVYNALLNFYA 260
Score = 58.9 bits (141), Expect = 2e-06
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +3
Query: 453 GQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQ-MKCGNILHKFEPDPYT 629
G LD AR++FD + +WN MI GY+ NN E I L+ Q M+ + D T
Sbjct: 384 GCLDFARKIFDNCSQGNIEIWNTMIGGYLQNNCPVEGIKLFLQAMESETVF-----DDVT 438
Query: 630 FSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
F S L A +++ L + + +H +I+++ + IV N++L MY+
Sbjct: 439 FLSALSAVSQLQWLDLAQQLHAYIIKNLSKLPVIVANAILVMYS 482
>gb|EMJ17708.1| hypothetical protein PRUPE_ppa025580mg, partial [Prunus persica]
Length = 804
Score = 146 bits (368), Expect = 1e-32
Identities = 86/180 (47%), Positives = 110/180 (61%), Gaps = 5/180 (2%)
Frame = +3
Query: 312 SAVPSTSPYSQIDPQCSSKDSSPCYFQLSSAQ-----KPKTIRYRLSQLCRKGQLDLARQ 476
SA+P P S P + ++P SSA K TIR RLS+LC++GQ LARQ
Sbjct: 4 SALPL--PLSTPSPSTQTSIANPPENLSSSALPLPKLKTPTIRSRLSKLCQEGQPLLARQ 61
Query: 477 LFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTFSSVLKACA 656
LFD +PRPTTV+WN +IIG+ICNN+ EA+ Y+QMK + + D YT+SS LKACA
Sbjct: 62 LFDTLPRPTTVLWNTIIIGFICNNMPNEALLFYAQMKASS--PHIKSDSYTYSSTLKACA 119
Query: 657 EMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYAXXXXXXXXXXXXXXVERVFNLMPKR 836
+ ++GKA+HCH+LR NP RIV NSLLNMY+ V RVF+ M KR
Sbjct: 120 DTRNFKMGKALHCHVLRCLPNPSRIVCNSLLNMYS-ACYNDFDYSEYDLVRRVFDTMRKR 178
Score = 57.4 bits (137), Expect = 6e-06
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Frame = +3
Query: 453 GQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIA-LYSQMKCGNILHKFEPDPYT 629
G LD AR++FD T +WN MI Y+ NNL EAI+ L+ +K + D T
Sbjct: 266 GCLDYARKIFDHCLERNTEIWNTMIGAYVQNNLPIEAISLLFQAVKSEQAI----LDEVT 321
Query: 630 FSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYAXXXXXXXXXXXXXXVE 809
F S L AC++ +L + +H I++ I+ N+ + MY+
Sbjct: 322 FLSALTACSQFQQLELAGQLHAFIIKHLRVMPVILQNATIVMYSRCNSVEMSF------- 374
Query: 810 RVFNLMPKR 836
++F+ MP+R
Sbjct: 375 KIFHKMPER 383
>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 146 bits (368), Expect = 1e-32
Identities = 76/132 (57%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
Frame = +3
Query: 375 SPCYFQL---SSAQKPKTIRYRLSQLCRKGQLDLARQLFDEIPRPTTVVWNAMIIGYICN 545
SP + L S+ K TIRYRLS+LC++GQL LARQLFD +PRP+TV+WN +IIG +CN
Sbjct: 13 SPSHLPLHTHSTNPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCN 72
Query: 546 NLHYEAIALYSQMKCGNILHKFEPDPYTFSSVLKACAEMMELRIGKAVHCHILRSETNPG 725
N EA+ YS MK + + + D YT+SSVLKACA+ L +GKAVH H LR NP
Sbjct: 73 NFPDEALLFYSNMKSSS--PQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPS 130
Query: 726 RIVYNSLLNMYA 761
RIVYNSLLNMY+
Sbjct: 131 RIVYNSLLNMYS 142
>ref|XP_006406206.1| hypothetical protein EUTSA_v10020073mg [Eutrema salsugineum]
gi|557107352|gb|ESQ47659.1| hypothetical protein
EUTSA_v10020073mg [Eutrema salsugineum]
Length = 825
Score = 142 bits (357), Expect = 2e-31
Identities = 77/148 (52%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
Frame = +3
Query: 318 VPSTSPYS-QIDPQCSSKDSSPCYFQLSSAQKPKTIRYRLSQLCRKGQLDLARQLFDEIP 494
+P P S Q PQ ++ SS + Q P +IR RLS++C+ G LARQLFD IP
Sbjct: 8 LPPPPPLSFQSPPQNQTRHSSSFSPPNLTPQTP-SIRSRLSRICQDGNPQLARQLFDAIP 66
Query: 495 RPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTFSSVLKACAEMMELR 674
+PTTV+WN +IIG+ICNNL +EA+ YS+MK K DPYT+SS LKACAE L+
Sbjct: 67 KPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKC--DPYTYSSTLKACAETRNLK 124
Query: 675 IGKAVHCHILRSETNPGRIVYNSLLNMY 758
GKAVHCH++R N R+V+NSL+NMY
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMY 152
>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329184|gb|EFH59603.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 824
Score = 139 bits (350), Expect = 1e-30
Identities = 71/147 (48%), Positives = 95/147 (64%)
Frame = +3
Query: 318 VPSTSPYSQIDPQCSSKDSSPCYFQLSSAQKPKTIRYRLSQLCRKGQLDLARQLFDEIPR 497
+P P S P + S + + + +IR RLS++C++G LARQLFD IP+
Sbjct: 8 LPPPPPLSLQSPSQNQTRHSSTFSPPTLTPQTPSIRSRLSKICQEGNPQLARQLFDAIPK 67
Query: 498 PTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTFSSVLKACAEMMELRI 677
PTTV+WN +IIG+ICNNL +EA+ YS+MK K D YT+SS LKACAE L+
Sbjct: 68 PTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKC--DAYTYSSTLKACAETKNLKA 125
Query: 678 GKAVHCHILRSETNPGRIVYNSLLNMY 758
GKAVHCH++R N R+V+NSL+NMY
Sbjct: 126 GKAVHCHLIRCLQNSSRVVHNSLMNMY 152
>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 139 bits (350), Expect = 1e-30
Identities = 76/149 (51%), Positives = 94/149 (63%), Gaps = 6/149 (4%)
Frame = +3
Query: 408 KPKTIRYRLSQLCRKGQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMK 587
KP TIR RLS LCR+G A LFD IPRPTTV+WN +IIG+ICNN+ +A+ Y++M+
Sbjct: 36 KPPTIRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMR 95
Query: 588 CGNILHKFEPDPYTFSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA-- 761
+ KF D YTFSS LKACA+ L++GKA+HCH+LRS RIVYNSLLNMY+
Sbjct: 96 -ASPSPKF--DSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTC 152
Query: 762 ----XXXXXXXXXXXXXXVERVFNLMPKR 836
V RVF+ M KR
Sbjct: 153 LTEVPYLGTAYDFNNCDLVRRVFDTMRKR 181
Score = 67.4 bits (163), Expect = 6e-09
Identities = 38/103 (36%), Positives = 59/103 (57%)
Frame = +3
Query: 453 GQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTF 632
G +D AR++FD T VWN MI GY+ NN EAI L+ Q+ +F D TF
Sbjct: 269 GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMES---EQFVLDDVTF 325
Query: 633 SSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
S L A +++ L +G+ +H +IL+S T ++ N+++ MY+
Sbjct: 326 LSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYS 368
Score = 57.8 bits (138), Expect = 5e-06
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +3
Query: 426 YRLSQLCRKGQLDLARQLFDEIPR--PTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNI 599
Y + + G + A+QLF++ WNAMI GY N L E A++ +M N+
Sbjct: 462 YLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNV 521
Query: 600 LHKFEPDPYTFSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
P+ T +S+L AC M + +GK +H +R N V +LL+MY+
Sbjct: 522 ----RPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYS 571
>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 139 bits (350), Expect = 1e-30
Identities = 76/149 (51%), Positives = 94/149 (63%), Gaps = 6/149 (4%)
Frame = +3
Query: 408 KPKTIRYRLSQLCRKGQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMK 587
KP TIR RLS LCR+G A LFD IPRPTTV+WN +IIG+ICNN+ +A+ Y++M+
Sbjct: 36 KPPTIRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMR 95
Query: 588 CGNILHKFEPDPYTFSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA-- 761
+ KF D YTFSS LKACA+ L++GKA+HCH+LRS RIVYNSLLNMY+
Sbjct: 96 -ASPSPKF--DSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTC 152
Query: 762 ----XXXXXXXXXXXXXXVERVFNLMPKR 836
V RVF+ M KR
Sbjct: 153 LTEVPYLGTAYDFNNCDLVRRVFDTMRKR 181
Score = 67.0 bits (162), Expect = 8e-09
Identities = 38/103 (36%), Positives = 59/103 (57%)
Frame = +3
Query: 453 GQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTF 632
G +D AR++FD T VWN MI GY+ NN EAI L+ Q+ +F D TF
Sbjct: 269 GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMES---EQFXLDDVTF 325
Query: 633 SSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
S L A +++ L +G+ +H +IL+S T ++ N+++ MY+
Sbjct: 326 LSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYS 368
Score = 58.5 bits (140), Expect = 3e-06
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +3
Query: 426 YRLSQLCRKGQLDLARQLFDEIPR--PTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNI 599
Y + + G + A+QLF++ WNAMI GY N L E A++ +M N+
Sbjct: 462 YLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNV 521
Query: 600 LHKFEPDPYTFSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
P+ T +S+L AC M + +GK +H +R N V +LL+MY+
Sbjct: 522 ----RPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYS 571
>ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein
[Arabidopsis thaliana] gi|332643073|gb|AEE76594.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 820
Score = 138 bits (347), Expect = 3e-30
Identities = 72/151 (47%), Positives = 95/151 (62%), Gaps = 4/151 (2%)
Frame = +3
Query: 318 VPSTSPYSQIDPQCSSKDSSPCYFQLSSAQKPKTIRYRLSQLCRKGQLDLARQLFDEIPR 497
+P P S P + S + + + +IR RLS++C+ G LARQLFD IP+
Sbjct: 8 LPPPPPLSLQSPSQNQTRHSSTFSPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPK 67
Query: 498 PTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEP----DPYTFSSVLKACAEMM 665
PTTV+WN +IIG+ICNNL +EA+ YS+MK K P D YT+SS LKACAE
Sbjct: 68 PTTVLWNTIIIGFICNNLPHEALLFYSRMK------KTAPFTNCDAYTYSSTLKACAETK 121
Query: 666 ELRIGKAVHCHILRSETNPGRIVYNSLLNMY 758
L+ GKAVHCH++R N R+V+NSL+NMY
Sbjct: 122 NLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY 152
>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 828
Score = 137 bits (345), Expect = 5e-30
Identities = 69/119 (57%), Positives = 88/119 (73%), Gaps = 4/119 (3%)
Frame = +3
Query: 417 TIRYRLSQLCRKGQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGN 596
+IR RLS+LCR+GQ LA L D +PRP+TVVWN++IIG+ICNNL ++A+ LY++M+ +
Sbjct: 51 SIRSRLSKLCREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNS 110
Query: 597 ILHKFEPDPYTFSSVLKACAEMMELRIGKAVHCHILRSETN----PGRIVYNSLLNMYA 761
F DPYTFSS LKACA ++ GKA+H H LRS +N P RIVYNSLLNMYA
Sbjct: 111 SCSTF--DPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYA 167
>ref|XP_006296991.1| hypothetical protein CARUB_v10012985mg [Capsella rubella]
gi|565478704|ref|XP_006296992.1| hypothetical protein
CARUB_v10012985mg [Capsella rubella]
gi|482565700|gb|EOA29889.1| hypothetical protein
CARUB_v10012985mg [Capsella rubella]
gi|482565701|gb|EOA29890.1| hypothetical protein
CARUB_v10012985mg [Capsella rubella]
Length = 824
Score = 135 bits (341), Expect = 1e-29
Identities = 70/147 (47%), Positives = 93/147 (63%)
Frame = +3
Query: 318 VPSTSPYSQIDPQCSSKDSSPCYFQLSSAQKPKTIRYRLSQLCRKGQLDLARQLFDEIPR 497
+P P S P + S + + + +IR RLS++C+ G LARQLFD IP+
Sbjct: 8 LPPPPPLSLQSPSQNQTRHSSTFSPPTLPPQTPSIRSRLSKICQDGNPQLARQLFDAIPK 67
Query: 498 PTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEPDPYTFSSVLKACAEMMELRI 677
PTTV+WN +IIG+ICN++ EA+ YS+MK K D YT+SS LKACAE LR
Sbjct: 68 PTTVLWNTIIIGFICNSMSQEALLFYSRMKKTAPFTKC--DAYTYSSTLKACAETKNLRA 125
Query: 678 GKAVHCHILRSETNPGRIVYNSLLNMY 758
GKAVHCH++R N R+V+NSL+NMY
Sbjct: 126 GKAVHCHLIRCLQNSSRVVHNSLMNMY 152
>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 133 bits (335), Expect = 7e-29
Identities = 65/112 (58%), Positives = 82/112 (73%)
Frame = +3
Query: 426 YRLSQLCRKGQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILH 605
+ L +LC++GQL LARQLFD +PRP+TV+WN +IIG +CNN EA+ YS MK +
Sbjct: 9 HELCRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSS--P 66
Query: 606 KFEPDPYTFSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
+ + D YT+SSVLKACA+ L +GKAVH H LR NP RIVYNSLLNMY+
Sbjct: 67 QVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYS 118
>gb|ESW14542.1| hypothetical protein PHAVU_008G290100g [Phaseolus vulgaris]
Length = 802
Score = 130 bits (328), Expect = 4e-28
Identities = 69/140 (49%), Positives = 90/140 (64%)
Frame = +3
Query: 417 TIRYRLSQLCRKGQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGN 596
TIR RLS+LC++GQ LAR L D +PR +T VWN +IIG+ICN + EA+ LY++MK
Sbjct: 26 TIRTRLSKLCQQGQPQLARHLLDSLPRASTAVWNTVIIGFICNKMPLEALQLYAEMKW-- 83
Query: 597 ILHKFEPDPYTFSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYAXXXXX 776
D YTFSS +KACA L GKA+HCH LRS++N R+VYNSLLNMY+
Sbjct: 84 -RRNTASDGYTFSSTMKACALTQNLIAGKALHCHFLRSQSN-SRVVYNSLLNMYSACLPP 141
Query: 777 XXXXXXXXXVERVFNLMPKR 836
V ++F++M KR
Sbjct: 142 FATQPQHDYVLKLFDVMRKR 161
Score = 57.4 bits (137), Expect = 6e-06
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +3
Query: 453 GQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHKFEP--DPY 626
G LD AR +FD T VWN MI GY+ NN + I ++ + L E D
Sbjct: 246 GCLDYARVVFDRCSGKNTEVWNTMIGGYVQNNCPLQGIDVFVR-----ALESEEAVCDDV 300
Query: 627 TFSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYA 761
TF SV+ A +++ ++++ + +H +L+S IV N+++ MY+
Sbjct: 301 TFLSVISAVSQLQQIKLAQQIHAFVLKSLAVTPIIVVNAIIVMYS 345
>gb|EPS60569.1| hypothetical protein M569_14234, partial [Genlisea aurea]
Length = 740
Score = 126 bits (316), Expect = 1e-26
Identities = 68/125 (54%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
Frame = +3
Query: 468 ARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGNILHK--FEPDPYTFSSV 641
AR LFD IP+PTTV+WN +IIGYICN + EAI+LYS+M C + + D YT SS
Sbjct: 1 ARHLFDAIPQPTTVLWNTLIIGYICNGIPLEAISLYSRMLCSGVKSHDGTKCDSYTLSSA 60
Query: 642 LKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYAXXXXXXXXXXXXXXVERVFN 821
LKACAE +L GKA+HCH+LR P RIVYNSLLNMYA V+RVF+
Sbjct: 61 LKACAETRQLLTGKALHCHVLRFCAYPSRIVYNSLLNMYA----TCLPSFECDLVKRVFS 116
Query: 822 LMPKR 836
M KR
Sbjct: 117 SMRKR 121
Score = 61.6 bits (148), Expect = 3e-07
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Frame = +3
Query: 426 YRLSQLCRKGQLDLARQLFDEIPRP---TTVVWNAMIIGYICNNLHYEAIALYSQMKCGN 596
Y + R G ++ A ++F+ VWN+MI GY N++ EA+A + +M
Sbjct: 404 YLIDMYSRSGSINAAERIFESTLGSHIGDLAVWNSMISGYARNDMIEEALASFRRM---- 459
Query: 597 ILHKFEPDPYTFSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYAXXXXX 776
+L P+ T +S+L C+ + +GK +HC LRS + V + L++MY+
Sbjct: 460 LLENMVPNSVTVASILPLCSRFGGIGLGKKLHCFALRSSLDGNLFVASGLVDMYS----- 514
Query: 777 XXXXXXXXXVERVFNLMPKR 836
ERVF P++
Sbjct: 515 --KCGAIRYAERVFESSPEK 532
>ref|XP_006576131.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Glycine max]
Length = 752
Score = 123 bits (309), Expect = 7e-26
Identities = 68/140 (48%), Positives = 88/140 (62%)
Frame = +3
Query: 417 TIRYRLSQLCRKGQLDLARQLFDEIPRPTTVVWNAMIIGYICNNLHYEAIALYSQMKCGN 596
+IR RLS+LC++GQ LAR L D +PR ++ VWN +IIG+ICN++ EA+ LY++MK
Sbjct: 27 SIRSRLSKLCQQGQPHLARHLLDTLPRASSAVWNTVIIGFICNHMPLEALHLYAEMKSS- 85
Query: 597 ILHKFEPDPYTFSSVLKACAEMMELRIGKAVHCHILRSETNPGRIVYNSLLNMYAXXXXX 776
D YTFSS LKAC+ L GKA+H H LRS++N RIVYNSLLNMY+
Sbjct: 86 --PDTPSDCYTFSSTLKACSLTQNLLAGKAIHSHFLRSQSN-SRIVYNSLLNMYSVCLPP 142
Query: 777 XXXXXXXXXVERVFNLMPKR 836
V +VF M KR
Sbjct: 143 STVQSQLDYVLKVFAFMRKR 162