BLASTX nr result
ID: Rauwolfia21_contig00043904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00043904
(705 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 93 9e-17
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 91 3e-16
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 91 3e-16
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar... 67 4e-09
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar... 62 2e-07
gb|EOX93867.1| Uncharacterized protein TCM_002850 [Theobroma cacao] 59 2e-06
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 57 6e-06
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
[petunia vein clearing virus]
Length = 2179
Score = 92.8 bits (229), Expect = 9e-17
Identities = 84/260 (32%), Positives = 118/260 (45%), Gaps = 30/260 (11%)
Frame = -2
Query: 704 SPTPQYSAFGTLIHTPYIPSSNTFNIAQWLKEQKAKRSAAAKTKEKQQEPHTSDASS-PP 528
+P PQ S F P P NTF++A+ + E+K +A + K+K Q+ +S PP
Sbjct: 664 TPQPQPSLFSQYPIQPKSP--NTFDLAKLVWEKKDAIAAEKRAKKKLQKDEVKQKTSLPP 721
Query: 527 ESK------------QAMIQNPFTPM---LRQVVSPSGSVPNISVIQDVNSQED-DSVS- 399
ESK Q MI +P P L + PS + S I S ED DS S
Sbjct: 722 ESKRPDPQSSSHLGDQFMISDPALPKVYALNEPSVPSEDTSSQSYISTEESVEDTDSFSV 781
Query: 398 ---DSTSKEALTNSTSESSQEDEFDVAIPQINMTR----EEREVSDNEGS*PNEPXXXXX 240
+ST L++S+++S + +E +PQ M R E EV D EP
Sbjct: 782 VSEESTQLSQLSSSSNDSPENNEN--TLPQTFMVRPTEPEISEVEDEVDGMTEEPIPERR 839
Query: 239 XXXXXXXTF-----TFQLDDILPK*WAKRFQQFHVWMSTRELSGISAEDILAEFTSRLTS 75
TF LDDI W +R Q FH WM T++L IL+EFT+RL+
Sbjct: 840 PEITPPKMVGTGFHTFSLDDISITKWPERIQDFHTWMLTKQLVEREPFLILSEFTARLSG 899
Query: 74 TLKHWFTTLNYVDKTTFLNA 15
TL+ W+ ++ DK FL +
Sbjct: 900 TLREWWNSVGPDDKNRFLTS 919
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 91.3 bits (225), Expect = 3e-16
Identities = 80/260 (30%), Positives = 117/260 (45%), Gaps = 30/260 (11%)
Frame = -2
Query: 704 SPTPQYSAFGTLIHTPYIPSSNTFNIAQWLKEQKAKRSAAAKTKEKQQEPHTSDASS-PP 528
+P PQ S F P P NTF++A+ + E+K + + K+K Q+ +S PP
Sbjct: 665 TPQPQPSLFSQYPIQPKSP--NTFDLAKLVWEKKDAIAEEKRAKKKLQKDEVKQKTSLPP 722
Query: 527 ESK------------QAMIQNPFTPMLRQVVSPS------GSVPNISVIQDVNSQEDDSV 402
ESK Q MI +P P + ++ PS S IS + V + SV
Sbjct: 723 ESKRPDPQSSSHLGDQFMISDPTLPKVYELNEPSVPSEDTSSQSYISTEESVEDTDSFSV 782
Query: 401 --SDSTSKEALTNSTSESSQEDEFDVAIPQINMTR----EEREVSDNEGS*PNEPXXXXX 240
+ST L++S+++S + +E +PQ M R E EV D EP
Sbjct: 783 VSEESTQLSQLSSSSNDSPENNEN--TLPQTFMVRPTEPEISEVEDEVDGMTEEPIPERR 840
Query: 239 XXXXXXXTF-----TFQLDDILPK*WAKRFQQFHVWMSTRELSGISAEDILAEFTSRLTS 75
TF LDDI W +R Q FH WM T++L IL+EFT+RL+
Sbjct: 841 PEITPPKMVGTGFHTFSLDDISITKWPERIQDFHTWMLTKQLVEREPFLILSEFTARLSG 900
Query: 74 TLKHWFTTLNYVDKTTFLNA 15
TL+ W+ ++ DK FL +
Sbjct: 901 TLREWWNSVGPDDKNRFLTS 920
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 91.3 bits (225), Expect = 3e-16
Identities = 80/260 (30%), Positives = 117/260 (45%), Gaps = 30/260 (11%)
Frame = -2
Query: 704 SPTPQYSAFGTLIHTPYIPSSNTFNIAQWLKEQKAKRSAAAKTKEKQQEPHTSDASS-PP 528
+P PQ S F P P NTF++A+ + E+K + + K+K Q+ +S PP
Sbjct: 665 TPQPQPSLFSQYPIQPKSP--NTFDLAKLVWEKKDAIAEEKRAKKKLQKDEVKQKTSLPP 722
Query: 527 ESK------------QAMIQNPFTPMLRQVVSPS------GSVPNISVIQDVNSQEDDSV 402
ESK Q MI +P P + ++ PS S IS + V + SV
Sbjct: 723 ESKRPDPQSSSHLGDQFMISDPTLPKVYELNEPSVPSEDTSSQSYISTEESVEDTDSFSV 782
Query: 401 --SDSTSKEALTNSTSESSQEDEFDVAIPQINMTR----EEREVSDNEGS*PNEPXXXXX 240
+ST L++S+++S + +E +PQ M R E EV D EP
Sbjct: 783 VSEESTQLSQLSSSSNDSPENNEN--TLPQTFMVRPTEPEISEVEDEVDGMTEEPIPERR 840
Query: 239 XXXXXXXTF-----TFQLDDILPK*WAKRFQQFHVWMSTRELSGISAEDILAEFTSRLTS 75
TF LDDI W +R Q FH WM T++L IL+EFT+RL+
Sbjct: 841 PEITPPKMVGTGFHTFSLDDISITKWPERIQDFHTWMLTKQLVEREPFLILSEFTARLSG 900
Query: 74 TLKHWFTTLNYVDKTTFLNA 15
TL+ W+ ++ DK FL +
Sbjct: 901 TLREWWNSVGPDDKNRFLTS 920
>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1645
Score = 67.4 bits (163), Expect = 4e-09
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Frame = -2
Query: 701 PTPQYSAFGTLI--HTPYIPSSNTFNIAQWLKEQKAKRSAAAKTKEKQQ--EPHTSDASS 534
P+P Y + + + YIP+S K + ++++ +++KEK +SD+
Sbjct: 619 PSPFYPTYASSPPDYAKYIPTSYR------PKPARTEKASTSRSKEKTTCLSLSSSDSQD 672
Query: 533 PPESKQAMIQNPFTPML----------RQVVSPSGSVPNISVIQDVNS-QEDDSVSDSTS 387
PE+ IQ P ++ S S+P S +D +S +E+DS D+++
Sbjct: 673 VPETPPPKIQKEEIPEKSFQAMTITENQKFPQESNSLPQSSKGEDSSSFEENDSSKDAST 732
Query: 386 KEALTNSTSESSQEDEFD---VAIPQINMTREEREVSDNEGS*PNEPXXXXXXXXXXXXT 216
E + +S S QE E + I ++ M + E S E S P
Sbjct: 733 DERSESFSSASEQESESERNYANISRLFMVNVKEEGSFYEDSFEENPVSGKTKINNGTW- 791
Query: 215 FTFQLDDILPK*WAKRFQQFHVWMSTREL-SGISAEDILAEFTSRLTSTLKHWFTTL 48
F LDDI W KR +F VW+ T+ + +G I+ EF R+T TLK W+ L
Sbjct: 792 --FTLDDIPSSLWRKRLLEFGVWLDTQMMKTGADTYKIIEEFCCRMTGTLKEWYHNL 846
>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1170
Score = 62.0 bits (149), Expect = 2e-07
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Frame = -2
Query: 656 YIPSSNTFNIAQWLKEQKAKRSAAAKTKEKQQEPHTSDASSPPESKQAMIQNPFTPMLRQ 477
YIPS A ++ +A +++ +++KEK T+ S Q + + P P +++
Sbjct: 101 YIPS------AYRPRQDRATKTSTSRSKEK-----TTCLSVSSSDSQDVAETP-PPKIQK 148
Query: 476 VVSPSGSVPNISVIQDV------NSQEDDSVS---DSTSKEALTNSTSES-----SQEDE 339
P S +++ +D NS DDS S D +S+EA ++ SES QE E
Sbjct: 149 EEVPEKSFQAMTITEDQTFPQENNSLPDDSSSFEQDDSSQEASSDERSESFSSVPEQESE 208
Query: 338 FDV---AIPQINMTREEREVSDNEGS*PNEPXXXXXXXXXXXXTFTFQLDDILPK*WAKR 168
+ +I + M + E S E S E FT LDDI P W KR
Sbjct: 209 SEKNYGSISKFFMVNVKEEGSTYEES-LEENLVSGKSKINSEPWFT--LDDIPPSMWRKR 265
Query: 167 FQQFHVWMSTREL-SGISAEDILAEFTSRLTSTLKHWFTTL 48
+F W+ T+ + +G +I+ EF R+T TLK W+ L
Sbjct: 266 LLEFGAWLDTQMMKTGADTYNIIEEFCCRMTGTLKEWYHNL 306
>gb|EOX93867.1| Uncharacterized protein TCM_002850 [Theobroma cacao]
Length = 183
Score = 58.9 bits (141), Expect = 2e-06
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = -2
Query: 212 TFQLDDILPK*WAKRFQQFHVWMSTRELSGISAEDILAEFTSRLTSTLKHW 60
TF +DDI P WA+RFQ+FH W+ T+ LS S I +F SR T TL++W
Sbjct: 133 TFTIDDIPPSRWAERFQEFHSWLETKRLSKNSYYTIRMKFVSRFTGTLRNW 183
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 57.0 bits (136), Expect = 6e-06
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 17/220 (7%)
Frame = -2
Query: 656 YIPSSNTFNIAQWLKEQKAKRSAAAKTKEKQQ--EPHTSDASSPPESKQAMIQNPFTP-- 489
YIPS A + + +++ +++KEK +SD+ E+ IQ P
Sbjct: 661 YIPS------AYRPRHDRTTKTSTSRSKEKTTCLSISSSDSQDVAETPPPKIQKEEVPEK 714
Query: 488 -MLRQVVSPSGSVPNISVIQDVNSQEDDSVS---DSTSKEALTNSTSES-----SQEDEF 336
++ + P Q+ NS DDS S D +S+EA ++ SES QE E
Sbjct: 715 GFQAMTITEDQTFP-----QENNSLPDDSSSFGQDDSSQEASSDERSESFSSVPEQESES 769
Query: 335 DV---AIPQINMTREEREVSDNEGS*PNEPXXXXXXXXXXXXTFTFQLDDILPK*WAKRF 165
+ I + M + E S E S E FT LDDI P W KR
Sbjct: 770 EKNYGGISKFFMVNVKEEGSTYEES-LEENLVSGKSKINSGPWFT--LDDIPPSLWRKRL 826
Query: 164 QQFHVWMSTREL-SGISAEDILAEFTSRLTSTLKHWFTTL 48
+F W+ T+ + +G I+ EF R+T TLK W+ L
Sbjct: 827 LEFGAWLDTQMMKTGADTYKIIEEFCCRMTGTLKEWYHNL 866