BLASTX nr result
ID: Rauwolfia21_contig00043878
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00043878 (404 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera] 144 9e-33 emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera] 141 8e-32 gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula] 138 7e-31 emb|CAN64628.1| hypothetical protein VITISV_039432 [Vitis vinifera] 136 2e-30 gb|ABE88097.1| Reverse transcriptase (RNA-dependent DNA polymera... 135 6e-30 ref|XP_004498133.1| PREDICTED: uncharacterized protein LOC101503... 134 1e-29 ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598... 131 1e-28 ref|NP_194047.2| cysteine-rich receptor-like protein kinase 8 [A... 130 1e-28 emb|CAA18463.1| putative protein [Arabidopsis thaliana] gi|72691... 130 1e-28 emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera] 129 4e-28 ref|XP_004509218.1| PREDICTED: uncharacterized protein LOC101501... 128 9e-28 ref|XP_003622005.1| Heat shock protein [Medicago truncatula] gi|... 127 2e-27 emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 127 2e-27 ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266... 127 2e-27 emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 127 2e-27 emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 127 2e-27 emb|CAN81494.1| hypothetical protein VITISV_031968 [Vitis vinifera] 126 3e-27 emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 126 3e-27 gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 126 3e-27 emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi... 126 3e-27 >emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera] Length = 660 Score = 144 bits (364), Expect = 9e-33 Identities = 73/135 (54%), Positives = 99/135 (73%), Gaps = 1/135 (0%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLPPG-FACRLNKSLYGFKQASRQWHSKLTAALLSQGFSSA 228 AFLHGDL EEVYM PPG+S P C+L KSLYG +QASRQW+SKL+++LL GF+ A Sbjct: 410 AFLHGDLNEEVYMQLPPGFSTPNDPQVCKLKKSLYGLRQASRQWNSKLSSSLLKFGFNQA 469 Query: 227 HSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXXXL 48 SD SLF+R+++T F+ +L+YVDD+I+A ++L +I +K FLH+SF IKD + Sbjct: 470 KSDSSLFIRQTSTSFIALLIYVDDVIIASNDLKEIDVVKRFLHESFTIKDLGELKYFLGI 529 Query: 47 EVNRSSRGINLCQRK 3 EV RS++GI L Q+K Sbjct: 530 EVARSAKGIVLSQQK 544 >emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera] Length = 1128 Score = 141 bits (356), Expect = 8e-32 Identities = 72/135 (53%), Positives = 98/135 (72%), Gaps = 1/135 (0%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLPPG-FACRLNKSLYGFKQASRQWHSKLTAALLSQGFSSA 228 AFLHGDL EEVYM P G+S P C+L KSLYG +QASRQW+SKL+++LL GFS A Sbjct: 728 AFLHGDLNEEVYMQLPLGFSTPNDPRVCKLKKSLYGLRQASRQWYSKLSSSLLKFGFSQA 787 Query: 227 HSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXXXL 48 +D SLF+++++T F+ +L+YVDD+I+A ++L +I +K FLH+SF IKD + Sbjct: 788 KTDSSLFIKQTSTSFIALLIYVDDVIIASNDLKEIDVVKKFLHESFTIKDLGELKYFVGI 847 Query: 47 EVNRSSRGINLCQRK 3 EV RS++GI L QRK Sbjct: 848 EVARSAKGIVLSQRK 862 >gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula] Length = 635 Score = 138 bits (348), Expect = 7e-31 Identities = 71/135 (52%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYS-LPPGFACRLNKSLYGFKQASRQWHSKLTAALLSQGFSSA 228 AFLHGDL E VY PPG S P C+L+KSLYG KQASR+W+ KLT L+S + A Sbjct: 212 AFLHGDLQENVYKKIPPGLSTFKPNQVCKLSKSLYGLKQASRKWYEKLTTLLISNDYKQA 271 Query: 227 HSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXXXL 48 SD SLF + ++ F ++LVYVDD+I+AG++LT+ H +K LH +FKIKD L Sbjct: 272 ASDASLFTKLTSETFTIILVYVDDIILAGNSLTEFHIIKNALHQAFKIKDLGILKYFLGL 331 Query: 47 EVNRSSRGINLCQRK 3 EV S GI+LCQRK Sbjct: 332 EVAHSHSGISLCQRK 346 >emb|CAN64628.1| hypothetical protein VITISV_039432 [Vitis vinifera] Length = 578 Score = 136 bits (343), Expect = 2e-30 Identities = 72/135 (53%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLP-PGFACRLNKSLYGFKQASRQWHSKLTAALLSQGFSSA 228 AFLHGDL EEVYM+ PPG ++ C L KSLYG KQASRQW++KL+ ALLS GF Sbjct: 148 AFLHGDLHEEVYMELPPGLAIQGEQKVCLLLKSLYGLKQASRQWYAKLSQALLSYGFVQG 207 Query: 227 HSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXXXL 48 + D SLF+++S + F+++LVYVDD+++A D++ +I LK FL F IKD L Sbjct: 208 NYDCSLFIKKSESSFMVLLVYVDDVLLASDSILEIERLKTFLDAKFTIKDLGPLKCFLGL 267 Query: 47 EVNRSSRGINLCQRK 3 EV RS GI+LCQRK Sbjct: 268 EVARSKTGISLCQRK 282 >gb|ABE88097.1| Reverse transcriptase (RNA-dependent DNA polymerase) [Medicago truncatula] Length = 293 Score = 135 bits (340), Expect = 6e-30 Identities = 70/137 (51%), Positives = 93/137 (67%), Gaps = 3/137 (2%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLPPGF---ACRLNKSLYGFKQASRQWHSKLTAALLSQGFS 234 AFLHG+L E+VYM PPG +P C+LNKSLYG +QAS +W+ KLT L+S G+ Sbjct: 97 AFLHGELQEDVYMIIPPG--VPHSHQDEVCKLNKSLYGLQQASMKWYEKLTNILISTGYK 154 Query: 233 SAHSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXX 54 A SD SLF++ + + F ++LVYVDD+I+AGD L++ + +K LHD+FKIKD Sbjct: 155 QAASDASLFIKHTHSSFTILLVYVDDVILAGDTLSEFNTIKGVLHDAFKIKDIGQLKYFL 214 Query: 53 XLEVNRSSRGINLCQRK 3 LEV S GI+LCQRK Sbjct: 215 GLEVAHSKSGISLCQRK 231 >ref|XP_004498133.1| PREDICTED: uncharacterized protein LOC101503854 [Cicer arietinum] Length = 969 Score = 134 bits (337), Expect = 1e-29 Identities = 64/135 (47%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLPP-GFACRLNKSLYGFKQASRQWHSKLTAALLSQGFSSA 228 AFLHGDL E+VYM PPG + C+L +SLYG KQASRQW+SKL L+ GF + Sbjct: 773 AFLHGDLVEDVYMKIPPGLHIENRNLVCKLKRSLYGLKQASRQWNSKLCNTLIELGFLQS 832 Query: 227 HSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXXXL 48 +D SLF ++++ GF ++L+YVD+L++A D++ +I LK+ LH F IKD Sbjct: 833 KADHSLFTKQTSVGFTIILIYVDNLLLADDDMNEITRLKSVLHSKFSIKDLGVVKYFLGF 892 Query: 47 EVNRSSRGINLCQRK 3 E+ R+S+GI++CQRK Sbjct: 893 EIARNSKGISVCQRK 907 >ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598606 [Solanum tuberosum] Length = 1453 Score = 131 bits (329), Expect = 1e-28 Identities = 70/135 (51%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLP-PGFACRLNKSLYGFKQASRQWHSKLTAALLSQGFSSA 228 AFLHGDL EEVYMD PPG +P G C+LNKSLYG KQASRQW+ KLTAAL S+G++ + Sbjct: 807 AFLHGDLNEEVYMDVPPGLDVPHTGLVCKLNKSLYGLKQASRQWYEKLTAALNSRGYTHS 866 Query: 227 HSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXXXL 48 D SL R+ + + VYVDD+++ G N +I +LK FL+D FKIKD L Sbjct: 867 LHDYSLLFRKKGHSTVFLGVYVDDILITGTNTEEITSLKNFLNDQFKIKDLGKLHYFLGL 926 Query: 47 EVNRSSRGINLCQRK 3 E+ + GI + QRK Sbjct: 927 EILYKNDGILISQRK 941 >ref|NP_194047.2| cysteine-rich receptor-like protein kinase 8 [Arabidopsis thaliana] gi|332659317|gb|AEE84717.1| cysteine-rich receptor-like protein kinase 8 [Arabidopsis thaliana] Length = 1262 Score = 130 bits (328), Expect = 1e-28 Identities = 69/140 (49%), Positives = 88/140 (62%), Gaps = 6/140 (4%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGY------SLPPGFACRLNKSLYGFKQASRQWHSKLTAALLSQ 243 AFL+GDL EE+YM PPGY SLPP C L KS+YG KQASRQW K + L+ Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257 Query: 242 GFSSAHSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXX 63 GF +HSD + FL+ + T FL VLVYVDD+I+ +N + LK+ L FK++D Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317 Query: 62 XXXXLEVNRSSRGINLCQRK 3 LE+ RS+ GIN+CQRK Sbjct: 318 YFLGLEIARSAAGINICQRK 337 >emb|CAA18463.1| putative protein [Arabidopsis thaliana] gi|7269163|emb|CAB79271.1| putative protein [Arabidopsis thaliana] Length = 1240 Score = 130 bits (328), Expect = 1e-28 Identities = 69/140 (49%), Positives = 88/140 (62%), Gaps = 6/140 (4%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGY------SLPPGFACRLNKSLYGFKQASRQWHSKLTAALLSQ 243 AFL+GDL EE+YM PPGY SLPP C L KS+YG KQASRQW K + L+ Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257 Query: 242 GFSSAHSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXX 63 GF +HSD + FL+ + T FL VLVYVDD+I+ +N + LK+ L FK++D Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317 Query: 62 XXXXLEVNRSSRGINLCQRK 3 LE+ RS+ GIN+CQRK Sbjct: 318 YFLGLEIARSAAGINICQRK 337 >emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera] Length = 1240 Score = 129 bits (324), Expect = 4e-28 Identities = 68/140 (48%), Positives = 91/140 (65%), Gaps = 6/140 (4%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYS------LPPGFACRLNKSLYGFKQASRQWHSKLTAALLSQ 243 AFLHGDL+EEV+M PPGY LP C+L+KS+YG +QASRQW +K + L+S+ Sbjct: 822 AFLHGDLSEEVFMHLPPGYHREGEPLLPSNTVCKLHKSIYGLRQASRQWFAKFSGVLISE 881 Query: 242 GFSSAHSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXX 63 GF +HSD SLF++ + F+ +LVYVDD+I A +N LK L+ SFK+KD Sbjct: 882 GFQQSHSDYSLFIKTAGNDFIALLVYVDDIIXASNNKIAADNLKNSLNKSFKLKDLGNLK 941 Query: 62 XXXXLEVNRSSRGINLCQRK 3 LEV RS++GI + QRK Sbjct: 942 YFLGLEVARSAKGILINQRK 961 >ref|XP_004509218.1| PREDICTED: uncharacterized protein LOC101501009 [Cicer arietinum] Length = 751 Score = 128 bits (321), Expect = 9e-28 Identities = 68/135 (50%), Positives = 87/135 (64%), Gaps = 1/135 (0%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLP-PGFACRLNKSLYGFKQASRQWHSKLTAALLSQGFSSA 228 AFLHGDL E+VYM PPG + C+L +SLYG KQASRQW+ KL +L GF + Sbjct: 479 AFLHGDLIEDVYMKIPPGLHVQHKSQVCKLKRSLYGLKQASRQWNMKL-CSLKQFGFHQS 537 Query: 227 HSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXXXL 48 SD S+F R + GF ++LVYVDDL++AGDNL +I+ +K L F IKD Sbjct: 538 KSDYSMFTRSTFAGFTVILVYVDDLLLAGDNLAEINYVKTSLQTVFSIKDLGVLKYFLGF 597 Query: 47 EVNRSSRGINLCQRK 3 E+ R+ RGI+LCQRK Sbjct: 598 EIARTKRGISLCQRK 612 >ref|XP_003622005.1| Heat shock protein [Medicago truncatula] gi|355497020|gb|AES78223.1| Heat shock protein [Medicago truncatula] Length = 1120 Score = 127 bits (319), Expect = 2e-27 Identities = 67/139 (48%), Positives = 93/139 (66%), Gaps = 5/139 (3%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLPP---GFA--CRLNKSLYGFKQASRQWHSKLTAALLSQG 240 AFLHGDL EEVYM PPG P GF C+L+KS+YG KQASRQW+SKL+ +L+S G Sbjct: 636 AFLHGDLHEEVYMSLPPGLKFPHDNNGFTKVCKLHKSIYGRKQASRQWYSKLSESLISLG 695 Query: 239 FSSAHSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXX 60 ++ + +D SLF + F +LVYVDD+++ G+N ++I +K+FLH+ FK+K+ Sbjct: 696 YTHSIADYSLFTTQHDVHFTALLVYVDDIVLTGNNYSEIQQVKSFLHNKFKMKNLGSLRY 755 Query: 59 XXXLEVNRSSRGINLCQRK 3 +EV RS GI + QRK Sbjct: 756 FLGIEVARSPSGIMINQRK 774 >emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] Length = 1523 Score = 127 bits (319), Expect = 2e-27 Identities = 70/135 (51%), Positives = 88/135 (65%), Gaps = 1/135 (0%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLPPGF-ACRLNKSLYGFKQASRQWHSKLTAALLSQGFSSA 228 AFL+GDL E+VYM PPG+ C+L+KSLYG KQASRQW KL++AL + GF + Sbjct: 1081 AFLNGDLYEDVYMQLPPGFGRKGEHRVCKLHKSLYGLKQASRQWFLKLSSALKAAGFKQS 1140 Query: 227 HSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXXXL 48 SD SLF R + F +LVYVDD+I+AG++L DI K FL FK+KD + Sbjct: 1141 WSDYSLFXRNTQGRFTTLLVYVDDVILAGNSLEDIIETKQFLASHFKLKDMGQLRYFLGI 1200 Query: 47 EVNRSSRGINLCQRK 3 EV RS +GI LCQRK Sbjct: 1201 EVARSKQGIVLCQRK 1215 >ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266877 [Solanum lycopersicum] Length = 1537 Score = 127 bits (318), Expect = 2e-27 Identities = 68/135 (50%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLPPG-FACRLNKSLYGFKQASRQWHSKLTAALLSQGFSSA 228 AFLHGDL EEVYM PPG +P C+L KSLYG KQASRQW+SKLT AL S+G+S + Sbjct: 1141 AFLHGDLHEEVYMKLPPGLEVPNSELVCKLKKSLYGLKQASRQWYSKLTEALSSRGYSHS 1200 Query: 227 HSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXXXL 48 D SLF R+ + + V VYVDD+I+ G + T+I LK +L ++FKIKD L Sbjct: 1201 QFDHSLFYRKEGSLAVFVAVYVDDVILTGTDTTEIAQLKVYLDNTFKIKDLGRLHYFLGL 1260 Query: 47 EVNRSSRGINLCQRK 3 E+ ++ G+ + QRK Sbjct: 1261 EILDTTDGVLISQRK 1275 >emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] Length = 1099 Score = 127 bits (318), Expect = 2e-27 Identities = 70/135 (51%), Positives = 84/135 (62%), Gaps = 1/135 (0%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLP-PGFACRLNKSLYGFKQASRQWHSKLTAALLSQGFSSA 228 AFLHGDL EEVYM PPG+ P CRL KSLYG KQA R W SKL AL GF + Sbjct: 702 AFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQS 761 Query: 227 HSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXXXL 48 +SD SLF + + VLVYVDDLI++G++ + KA+L D FK+KD + Sbjct: 762 YSDYSLFTYTTGNVQINVLVYVDDLIISGNDSAALKTFKAYLSDCFKMKDLGVLKYFLGI 821 Query: 47 EVNRSSRGINLCQRK 3 EV RSS G+ LCQRK Sbjct: 822 EVARSSAGLFLCQRK 836 >emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] Length = 1178 Score = 127 bits (318), Expect = 2e-27 Identities = 70/135 (51%), Positives = 84/135 (62%), Gaps = 1/135 (0%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLP-PGFACRLNKSLYGFKQASRQWHSKLTAALLSQGFSSA 228 AFLHGDL EEVYM PPG+ P CRL KSLYG KQA R W SKL AL GF + Sbjct: 781 AFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQS 840 Query: 227 HSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXXXXXL 48 +SD SLF + + VLVYVDDLI++G++ + KA+L D FK+KD + Sbjct: 841 YSDYSLFTYTTGNVQINVLVYVDDLIISGNDSAALKTFKAYLSDCFKMKDLGVLKYFLGI 900 Query: 47 EVNRSSRGINLCQRK 3 EV RSS G+ LCQRK Sbjct: 901 EVARSSAGLFLCQRK 915 >emb|CAN81494.1| hypothetical protein VITISV_031968 [Vitis vinifera] Length = 501 Score = 126 bits (317), Expect = 3e-27 Identities = 68/141 (48%), Positives = 89/141 (63%), Gaps = 7/141 (4%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYS-------LPPGFACRLNKSLYGFKQASRQWHSKLTAALLS 246 AFLHGDL EEVYM+ P GY+ LP CRL+KS+YG KQ SRQW K + ALLS Sbjct: 98 AFLHGDLMEEVYMNLPXGYTCQSEGEXLPXNAVCRLHKSIYGLKQVSRQWFHKFSNALLS 157 Query: 245 QGFSSAHSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXX 66 +GF + +D +LF + T FL +L+YVDD+I+A ++ + LK L+ FK+KD Sbjct: 158 EGFVQSTNDHTLFTKYQDTSFLALLIYVDDIIIASNDRLAVDTLKHALNCKFKMKDLGPL 217 Query: 65 XXXXXLEVNRSSRGINLCQRK 3 LEV RS GI++CQRK Sbjct: 218 RYFLGLEVARSIAGISICQRK 238 >emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] Length = 1288 Score = 126 bits (317), Expect = 3e-27 Identities = 71/139 (51%), Positives = 89/139 (64%), Gaps = 5/139 (3%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGY-----SLPPGFACRLNKSLYGFKQASRQWHSKLTAALLSQG 240 AFLHGDL EEVYM PPGY SLP C L+KSLYG KQASRQW SK + A++ G Sbjct: 908 AFLHGDLNEEVYMKLPPGYNRKGESLPSNXVCLLHKSLYGLKQASRQWFSKFSTAIMGLG 967 Query: 239 FSSAHSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXXX 60 FS + SD SLF++ F+ +LVYVDD+I+A +N I LK+ L+ FK+KD Sbjct: 968 FSQSPSDHSLFIKNVDGLFIAJLVYVDDVIIASNNQGAIADLKSELNKLFKLKDLGDVKY 1027 Query: 59 XXXLEVNRSSRGINLCQRK 3 LE+ +SS GI + QRK Sbjct: 1028 FLGLEIAKSSTGICVSQRK 1046 >gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score: 11.19) [Arabidopsis thaliana] Length = 1633 Score = 126 bits (316), Expect = 3e-27 Identities = 65/140 (46%), Positives = 90/140 (64%), Gaps = 6/140 (4%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLPPGFA------CRLNKSLYGFKQASRQWHSKLTAALLSQ 243 AFLHG+L EE+YM P GY+ P G + CRL KSLYG KQASRQW+ +L++ L Sbjct: 1051 AFLHGELDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSLYGLKQASRQWYKRLSSVFLGA 1110 Query: 242 GFSSAHSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXX 63 F + +D ++F++ S T ++VLVYVDDL++A ++ + + LK L FKIKD Sbjct: 1111 NFIQSPADNTMFVKVSCTSIIVVLVYVDDLMIASNDSSAVENLKELLRSEFKIKDLGPAR 1170 Query: 62 XXXXLEVNRSSRGINLCQRK 3 LE+ RSS GI++CQRK Sbjct: 1171 FFLGLEIARSSEGISVCQRK 1190 >emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana] gi|7267797|emb|CAB81200.1| putative retrotransposon polyprotein [Arabidopsis thaliana] Length = 1203 Score = 126 bits (316), Expect = 3e-27 Identities = 65/140 (46%), Positives = 90/140 (64%), Gaps = 6/140 (4%) Frame = -1 Query: 404 AFLHGDLAEEVYMDPPPGYSLPPGFA------CRLNKSLYGFKQASRQWHSKLTAALLSQ 243 AFLHG+L EE+YM P GY+ P G + CRL KSLYG KQASRQW+ +L++ L Sbjct: 637 AFLHGELDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSLYGLKQASRQWYKRLSSVFLGA 696 Query: 242 GFSSAHSDPSLFLRRSTTGFLLVLVYVDDLIMAGDNLTDIHALKAFLHDSFKIKDXXXXX 63 F + +D ++F++ S T ++VLVYVDDL++A ++ + + LK L FKIKD Sbjct: 697 NFIQSPADNTMFVKVSCTSIIVVLVYVDDLMIASNDSSAVENLKELLRSEFKIKDLGPAR 756 Query: 62 XXXXLEVNRSSRGINLCQRK 3 LE+ RSS GI++CQRK Sbjct: 757 FFLGLEIARSSEGISVCQRK 776