BLASTX nr result
ID: Rauwolfia21_contig00043862
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00043862
(514 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355439.1| PREDICTED: putative pentatricopeptide repeat... 233 3e-59
ref|XP_006477182.1| PREDICTED: putative pentatricopeptide repeat... 223 3e-56
ref|XP_003635122.1| PREDICTED: putative pentatricopeptide repeat... 222 5e-56
ref|XP_006440307.1| hypothetical protein CICLE_v10019350mg [Citr... 221 8e-56
emb|CAN66782.1| hypothetical protein VITISV_013509 [Vitis vinifera] 220 2e-55
ref|XP_004301195.1| PREDICTED: putative pentatricopeptide repeat... 218 7e-55
gb|EXC28316.1| hypothetical protein L484_011820 [Morus notabilis] 218 9e-55
gb|EOY24327.1| Pentatricopeptide repeat superfamily protein, put... 213 2e-53
ref|XP_002534617.1| pentatricopeptide repeat-containing protein,... 213 2e-53
ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago ... 206 2e-51
ref|XP_004162352.1| PREDICTED: putative pentatricopeptide repeat... 200 1e-49
ref|XP_004147255.1| PREDICTED: putative pentatricopeptide repeat... 200 1e-49
ref|XP_004511691.1| PREDICTED: putative pentatricopeptide repeat... 195 5e-48
ref|XP_003538739.1| PREDICTED: putative pentatricopeptide repeat... 191 9e-47
ref|XP_006398443.1| hypothetical protein EUTSA_v10000835mg [Eutr... 173 2e-41
ref|NP_199557.1| pentatricopeptide repeat-containing protein [Ar... 172 5e-41
ref|XP_006282278.1| hypothetical protein CARUB_v10028562mg [Caps... 170 2e-40
ref|XP_002863342.1| pentatricopeptide repeat-containing protein ... 166 4e-39
gb|ABD65008.1| PPR repeat containing protein [Brassica oleracea] 160 1e-37
ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi... 126 3e-27
>ref|XP_006355439.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Solanum tuberosum]
Length = 461
Score = 233 bits (593), Expect = 3e-59
Identities = 113/169 (66%), Positives = 133/169 (78%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
KF ALNL +QL +++ D+YS TA LSACG L L+QLGK IHSKIVK GV CS++V+N
Sbjct: 21 KFTAALNLFIQLERSELCSDSYSFTAVLSACGSLGLVQLGKLIHSKIVKFGVECSIVVSN 80
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNIS 362
LIDMYGKC VEES R F M++++TISWNS+IAANAR RL QA L+ MPEPD +S
Sbjct: 81 SLIDMYGKCNSVEESTRVFDSMMEKDTISWNSVIAANARNSRLDQAFDFLRQMPEPDTVS 140
Query: 363 YNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEAL 509
YNEVISG+AQFG IEDA+D+L M +PNSSSWNSIITGYVNR R EAL
Sbjct: 141 YNEVISGVAQFGNIEDAVDMLSRMPSPNSSSWNSIITGYVNRGRAKEAL 189
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Frame = +3
Query: 9 RKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCL 188
++AL + + + D ++ ++ LS ++ + GK IH VK GV +V+V L
Sbjct: 186 KEALLFFRNMHLSTVFMDQFTFSSILSGIANIAAITWGKLIHCCTVKYGVNETVVVGTAL 245
Query: 189 IDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EPD 353
IDMY KCG++ E+ F + +N I+WN+II+ A Q + L + + +PD
Sbjct: 246 IDMYSKCGQMNEADILFGWLPVKNLITWNTIISGYAHNSNSDQVIRLFEQLKSVKDLQPD 305
Query: 354 NISYNEVIS 380
I++ V++
Sbjct: 306 GITFVNVLA 314
>ref|XP_006477182.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Citrus sinensis]
Length = 609
Score = 223 bits (567), Expect = 3e-56
Identities = 108/169 (63%), Positives = 134/169 (79%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
K+RKALNL ++L +++ Y DAYS T+AL+ACG+L LQLG +IHSKIVK + V++AN
Sbjct: 168 KYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIAN 227
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNIS 362
CLIDMYGKCG VE++I F EM+D++ ISWNS+IAA+AR G L A L +P PD IS
Sbjct: 228 CLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPDTIS 287
Query: 363 YNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEAL 509
YNEVI+GIAQFG IEDAI IL +M +PNSSSWNSI+TGYVNR+R EAL
Sbjct: 288 YNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNRVPEAL 336
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Frame = +3
Query: 12 KALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLI 191
+AL+L ++ D D Y+ + LS LS L G IHS ++K G+ S++VA+ L+
Sbjct: 334 EALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALL 393
Query: 192 DMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EPDN 356
DMY KCG+VE + F + +N ++WN++I AR G L + + L + + +PD+
Sbjct: 394 DMYSKCGQVEIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLQPDS 453
Query: 357 ISYNEVIS 380
+++ V++
Sbjct: 454 VTFLNVLA 461
>ref|XP_003635122.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Vitis vinifera]
gi|297744381|emb|CBI37355.3| unnamed protein product
[Vitis vinifera]
Length = 601
Score = 222 bits (565), Expect = 5e-56
Identities = 109/170 (64%), Positives = 138/170 (81%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
+FR AL L L+L ++D DA+S TAAL+ CG LSLL+LG+SIHSKIVK G+ SV+VAN
Sbjct: 160 QFRAALGLFLKLERSDICADAFSFTAALATCGHLSLLRLGESIHSKIVKSGLEWSVVVAN 219
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNIS 362
CL+DMYGKCG V+E+IR F ++D++ ISWN++I+A+AR +L QA S L+ MPEPD IS
Sbjct: 220 CLVDMYGKCGYVQEAIRVFDSIIDKDIISWNTVISASARNRKLEQAFSYLRQMPEPDTIS 279
Query: 363 YNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
YNE+I+GIAQFG IEDAI IL +M +PNSSSWNSIITGYVNR + EAL+
Sbjct: 280 YNELINGIAQFGNIEDAIQILSSMPSPNSSSWNSIITGYVNRDLSWEALD 329
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Frame = +3
Query: 12 KALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLI 191
+AL+ ++ D D ++ ++ LS L+ L+ G IH +K G+ S++V + LI
Sbjct: 326 EALDFFSKMQSKDIEMDRFTFSSILSGIAGLAALKWGVLIHCCTIKCGLDESIVVGSALI 385
Query: 192 DMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EPDN 356
DMY KCG+V+ + F + +N ++WN++I+ A G + + L + + +PD
Sbjct: 386 DMYSKCGQVKNAEMLFQSLPRKNLVTWNAMISGFAHNGNFTEVIKLFKQLKTERDLKPDG 445
Query: 357 ISYNEVI 377
I++ V+
Sbjct: 446 ITFLNVL 452
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/99 (29%), Positives = 54/99 (54%)
Frame = +3
Query: 57 PDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEESIRA 236
P+AY+L + A L L+ G+ +HS I++ G +V V+ L++ Y + ++++
Sbjct: 77 PNAYALLHLVRASTNLGLIPFGQQLHSYILRSGFGSNVFVSTALLNFYIRIESLKDAHNV 136
Query: 237 FSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPD 353
F E+ + + +SWNS+I+ A G+ AL L + D
Sbjct: 137 FVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSD 175
>ref|XP_006440307.1| hypothetical protein CICLE_v10019350mg [Citrus clementina]
gi|557542569|gb|ESR53547.1| hypothetical protein
CICLE_v10019350mg [Citrus clementina]
Length = 611
Score = 221 bits (563), Expect = 8e-56
Identities = 107/169 (63%), Positives = 134/169 (79%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
K+RKALNL ++L +++ Y DAYS T+AL+ACG+L LQLG +IHSKIVK + V++AN
Sbjct: 170 KYRKALNLFVELERSEIYADAYSFTSALAACGQLGSLQLGMAIHSKIVKYSLERGVVIAN 229
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNIS 362
CLIDMYGKCG VE++I F EM+D++ ISWNS+IAA+AR G L A L +P PD IS
Sbjct: 230 CLIDMYGKCGSVEDAIGVFGEMIDKDIISWNSVIAASARNGNLELAFGFLHRLPNPDTIS 289
Query: 363 YNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEAL 509
YNEVI+GIAQFG IEDAI IL +M +PNSSSWNSI+TGYVNR++ EAL
Sbjct: 290 YNEVINGIAQFGDIEDAIMILSSMPSPNSSSWNSILTGYVNRNQVPEAL 338
Score = 80.5 bits (197), Expect = 2e-13
Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Frame = +3
Query: 12 KALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLI 191
+AL+L ++ D D Y+ + LS LS L G IHS ++K G+ S++VA+ L+
Sbjct: 336 EALHLFGEMQSKDVPMDEYTFSTMLSGIAGLSALTWGMLIHSCVIKQGLDASIVVASALL 395
Query: 192 DMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EPDN 356
DMY KCG+V+ + F + +N ++WN++I AR G L + + L + + +PD+
Sbjct: 396 DMYSKCGQVKIADSMFRSLCRKNLVTWNAMITGYARNGDLTKVIELFEQLKTVRDLKPDS 455
Query: 357 ISYNEVI 377
+++ V+
Sbjct: 456 VTFLNVL 462
>emb|CAN66782.1| hypothetical protein VITISV_013509 [Vitis vinifera]
Length = 625
Score = 220 bits (560), Expect = 2e-55
Identities = 108/170 (63%), Positives = 137/170 (80%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
+FR AL L L+L ++D DA+S TAAL+ CG LSLL+LG+SIHSKIVK G+ SV+VAN
Sbjct: 184 QFRAALGLFLKLERSDICADAFSFTAALATCGHLSLLRLGESIHSKIVKSGLEWSVVVAN 243
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNIS 362
CL+DMYGKCG V+E+IR F ++D++ ISWN++I+A+AR +L QA S L+ MPEPD IS
Sbjct: 244 CLVDMYGKCGYVQEAIRVFDSIIDKDIISWNTVISASARNRKLEQAFSYLRQMPEPDTIS 303
Query: 363 YNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
YNE+I+GIAQFG EDAI IL +M +PNSSSWNSIITGYVNR + EAL+
Sbjct: 304 YNELINGIAQFGNXEDAIQILSSMPSPNSSSWNSIITGYVNRDLSWEALD 353
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Frame = +3
Query: 12 KALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLI 191
+AL+ ++ D D ++ ++ LS L+ L+ G IH +K G+ S++V + LI
Sbjct: 350 EALDFFSKMQSKDIEMDRFTFSSILSGIAGLAALKWGVLIHCCTIKCGLDESIVVGSALI 409
Query: 192 DMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EPDN 356
DMY KCG+V+ + F + +N ++WN++I+ A G + + L + + +PD
Sbjct: 410 DMYSKCGQVKNAEMLFQSLPRKNLVTWNAMISGFAHNGNFTEVIKLFKQLKTERDLKPDG 469
Query: 357 ISYNEVI 377
I++ V+
Sbjct: 470 ITFLNVL 476
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/99 (29%), Positives = 54/99 (54%)
Frame = +3
Query: 57 PDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEESIRA 236
P+AY+L + A L L+ G+ +HS I++ G +V V+ L++ Y + ++++
Sbjct: 101 PNAYALLHLVRASTNLGLIPFGQQLHSYILRSGFGSNVFVSTALLNFYIRIESLKDAHNV 160
Query: 237 FSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPD 353
F E+ + + +SWNS+I+ A G+ AL L + D
Sbjct: 161 FVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSD 199
>ref|XP_004301195.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Fragaria vesca subsp. vesca]
Length = 529
Score = 218 bits (555), Expect = 7e-55
Identities = 107/169 (63%), Positives = 134/169 (79%)
Frame = +3
Query: 6 FRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANC 185
+ KAL+L LQL ++ D+YSLTAAL ACG+L LQLGKS+HSK VKLG+ S +V NC
Sbjct: 92 YSKALSLFLQLERSGVSADSYSLTAALGACGQLRFLQLGKSVHSKTVKLGLQDSTVVLNC 151
Query: 186 LIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNISY 365
LIDMYGKCG ++E+ F+ M++R+TISWNS+IAA+AR G L QA S LQ M +PD ISY
Sbjct: 152 LIDMYGKCGLLQEANLVFNNMIERDTISWNSVIAASARNGSLEQAFSFLQQMDDPDIISY 211
Query: 366 NEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
NE+I+G ++FG IEDAI++L +M NPNSSSWNSIITGYVNR R EAL+
Sbjct: 212 NEMINGFSRFGDIEDAIELLLSMPNPNSSSWNSIITGYVNRGRAREALD 260
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Frame = +3
Query: 9 RKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCL 188
R+AL+ ++ + D ++ ++ LS +S L G IH +K G+A SV+V + L
Sbjct: 256 REALDFFCKMQMENVEMDQFTFSSILSGVAGISALTWGMLIHCCTIKYGLATSVVVGSAL 315
Query: 189 IDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EPD 353
IDMY KCG+V ++ F + ++N ++WN++I+ +R G Q + + M +PD
Sbjct: 316 IDMYSKCGKVSDAEMIFHLLPEKNLVTWNAMISGFSRNGNPSQVMLFFEQMKRERDVKPD 375
Query: 354 NISYNEVIS 380
I++ VIS
Sbjct: 376 EITFLNVIS 384
>gb|EXC28316.1| hypothetical protein L484_011820 [Morus notabilis]
Length = 581
Score = 218 bits (554), Expect = 9e-55
Identities = 111/168 (66%), Positives = 133/168 (79%)
Frame = +3
Query: 9 RKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCL 188
RKAL LQL ++D D+YSLTAAL+ACGRLS L+LG+SIHS++VKLGV SV+V+NCL
Sbjct: 143 RKALFAFLQLERSDISADSYSLTAALAACGRLSFLRLGRSIHSEVVKLGVESSVVVSNCL 202
Query: 189 IDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNISYN 368
IDMYGKCG VEE+I F EMVD++ ISWNS IAA AR G L A+ L+ MP PD ISYN
Sbjct: 203 IDMYGKCGSVEEAIHMFDEMVDKDLISWNSAIAACARNGCLKPAVWFLEQMPNPDTISYN 262
Query: 369 EVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
E+ISG AQFG++ +AI IL M NPNSSSWNSIITGYVNR++ AL+
Sbjct: 263 ELISGFAQFGEMGEAIKILSNMPNPNSSSWNSIITGYVNRNQARGALD 310
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/129 (30%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Frame = +3
Query: 9 RKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCL 188
R AL++L ++ + + ++ ++ LS LS + G IH +K G+ SV+V + L
Sbjct: 306 RGALDILCKMHSKNIEMEQFTFSSILSGVAGLSAVTWGMLIHCCAIKGGLDASVVVGSAL 365
Query: 189 IDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EPD 353
IDMY KCGEV+ + F + +RN ++WN++++ A G+ + + L + + +PD
Sbjct: 366 IDMYSKCGEVKNAESIFQALKERNLVTWNAMVSGFAHNGKFSRVIDLFEQLQMEGGVKPD 425
Query: 354 NISYNEVIS 380
I++ V+S
Sbjct: 426 EITFLNVLS 434
>gb|EOY24327.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 604
Score = 213 bits (543), Expect = 2e-53
Identities = 103/170 (60%), Positives = 129/170 (75%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
+FRKAL L L+L ++D + YS T AL+ACG+L L LGKSIHS I+K G+ C +IV N
Sbjct: 165 QFRKALGLFLKLQRSDICSNEYSFTVALAACGQLGFLHLGKSIHSNILKFGLECGIIVRN 224
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNIS 362
CLID YGKCG V++++ F M+D++ ISWNS++AA AR G+L +A S + MP D IS
Sbjct: 225 CLIDTYGKCGAVDDAVLVFHSMIDKDVISWNSVLAACARNGKLEEAFSFWRQMPLRDTIS 284
Query: 363 YNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
YNE+ISGIAQFG I DAIDILF M NPNSSSW SI+TGYVNR+R EAL+
Sbjct: 285 YNELISGIAQFGNINDAIDILFNMPNPNSSSWTSIMTGYVNRNRAREALQ 334
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Frame = +3
Query: 9 RKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCL 188
R+AL ++ + D +S + LS LS L G IH +K G+ SV+V + L
Sbjct: 330 REALQFFSKMHSNEVELDEFSFSIILSGIAGLSALTWGMLIHCCTIKCGLDTSVVVGSAL 389
Query: 189 IDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EPD 353
IDMY KCG V+ + F + +N ++WN++I+ A G + + L + + +PD
Sbjct: 390 IDMYSKCGRVKNTESMFQSLPKKNLVTWNAMISGYAHNGDSTKVIQLFELLKRERDLKPD 449
Query: 354 NISYNEVISGIAQFG 398
I++ V++ + G
Sbjct: 450 AITFLNVLAACSHSG 464
>ref|XP_002534617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223524904|gb|EEF27768.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 458
Score = 213 bits (543), Expect = 2e-53
Identities = 107/169 (63%), Positives = 127/169 (75%)
Frame = +3
Query: 6 FRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANC 185
FRKAL L LQL ++D PDAYS T ALSACG+LS+LQ G+SIH KIVK C V+V NC
Sbjct: 24 FRKALGLFLQLNRSDVCPDAYSFTVALSACGQLSMLQFGRSIHCKIVKCSSDCGVVVGNC 83
Query: 186 LIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNISY 365
LIDMYGKC V+E+ F +++D++ ISWNS+IAA AR GRL A + MPE D ISY
Sbjct: 84 LIDMYGKCASVKEATWVFDKLIDKDIISWNSVIAACARNGRLELAYNFFCQMPELDTISY 143
Query: 366 NEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
NEVI+GIAQFG IEDAI IL M + NSSSWNS+IT YVNR++ EALE
Sbjct: 144 NEVINGIAQFGNIEDAIAILLNMPHSNSSSWNSVITAYVNRNQAREALE 192
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Frame = +3
Query: 9 RKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCL 188
R+AL ++ +D D Y+ + LS + + G IH +K G SV+V + L
Sbjct: 188 REALEFFTKMHSSDIKKDEYTYSVILSGVAGAAAWKWGMLIHCCAIKGGWDTSVVVGSAL 247
Query: 189 IDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EPD 353
IDMY KCG+V+ + F + RN I+WN++I+ A G + + + M +PD
Sbjct: 248 IDMYSKCGQVKSAESMFQSLPVRNLITWNAMISGYAHNGNSYEMIQHFEEMKMVEDLKPD 307
Query: 354 NISYNEVIS 380
++++ VIS
Sbjct: 308 SVTFLNVIS 316
>ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago truncatula]
gi|355512648|gb|AES94271.1| hypothetical protein
MTR_5g012660 [Medicago truncatula]
Length = 519
Score = 206 bits (525), Expect = 2e-51
Identities = 101/170 (59%), Positives = 129/170 (75%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
+F+KAL+L +L ++ DA+S T+A+ AC +LSLL+LG SIHSK VKLG+ + +VAN
Sbjct: 87 QFKKALSLFTKLERSQICADAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVAN 146
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNIS 362
CLIDMYGKCG VE ++R FS++ D++ ISWNS+IAA A G +G LQ MP PD +S
Sbjct: 147 CLIDMYGKCGSVERAVRIFSDIADKDVISWNSVIAACANNGNIGLGFKFLQLMPNPDVVS 206
Query: 363 YNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
YN +I+GIAQ GKIEDA+ IL M PNSSSWNS+ITG+VNRSR EALE
Sbjct: 207 YNGLINGIAQAGKIEDAVRILSTMPCPNSSSWNSVITGFVNRSRVPEALE 256
Score = 79.0 bits (193), Expect = 6e-13
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Frame = +3
Query: 60 DAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEESIRAF 239
D ++ + L+ LS L G IH +K G+ S++V + LIDMY KCG+V ++ F
Sbjct: 269 DEFTFSIILNGIASLSALTWGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIF 328
Query: 240 SEMVDRNTISWNSIIAANARKGRLGQALSLLQTM-----PEPDNISYNEVIS 380
+ + +RN +SWN++I AR G QA+SL + + +PD I++ VIS
Sbjct: 329 NVLSNRNLVSWNAMIYGYARNGDSAQAISLFELLKMERDTKPDGITFLNVIS 380
>ref|XP_004162352.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Cucumis sativus]
Length = 639
Score = 200 bits (509), Expect = 1e-49
Identities = 99/169 (58%), Positives = 129/169 (76%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
+FRKAL L +QL + + D+YSL+ ALSA G L L LG+SIHSK++KLG+ S +VAN
Sbjct: 154 QFRKALCLFIQLDGSGNLVDSYSLSIALSASGHLGWLILGQSIHSKVIKLGLEDSTVVAN 213
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNIS 362
CLIDMYGKC E ++ F++M+ ++TISWNS+IAA+AR GRL QA LQ MP PD IS
Sbjct: 214 CLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTIS 273
Query: 363 YNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEAL 509
+NE+I+G AQFG IE A++IL M +PNSSSWN+++TGYV+R T EAL
Sbjct: 274 FNELINGYAQFGDIEYAVEILSKMDSPNSSSWNAVLTGYVDRDETWEAL 322
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Frame = +3
Query: 12 KALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLI 191
+AL+ ++ D D ++ ++ LS LS L+ G +IH I K G+ S +V + LI
Sbjct: 320 EALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALI 379
Query: 192 DMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EPDN 356
MY KCG V + F + +N +SWN++I+ A G+ + + L + + +PDN
Sbjct: 380 SMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKMTKDVKPDN 439
Query: 357 ISYNEVI 377
I++ ++
Sbjct: 440 ITFLNIL 446
Score = 58.2 bits (139), Expect = 1e-06
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 39/189 (20%)
Frame = +3
Query: 57 PDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEESIRA 236
P+ Y+L + AC +L G +HS I++ G A +V V +++ Y K + + +
Sbjct: 71 PNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIKTESFDSAHKL 130
Query: 237 FSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNI--SYNEVI----SG----- 383
F EM + ++WNS+I+ G+ +AL L + N+ SY+ I SG
Sbjct: 131 FDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSLSIALSASGHLGWL 190
Query: 384 -------------------------IAQFGK---IEDAIDILFAMANPNSSSWNSIITGY 479
I +GK E A+++ M ++ SWNS+I
Sbjct: 191 ILGQSIHSKVIKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAAS 250
Query: 480 VNRSRTAEA 506
R +A
Sbjct: 251 ARNGRLEQA 259
>ref|XP_004147255.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Cucumis sativus]
Length = 582
Score = 200 bits (509), Expect = 1e-49
Identities = 99/169 (58%), Positives = 129/169 (76%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
+FRKAL L +QL + + D+YSL+ ALSA G L L LG+SIHSK++KLG+ S +VAN
Sbjct: 154 QFRKALCLFIQLDGSGNLVDSYSLSIALSASGHLGWLILGQSIHSKVIKLGLEDSTVVAN 213
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNIS 362
CLIDMYGKC E ++ F++M+ ++TISWNS+IAA+AR GRL QA LQ MP PD IS
Sbjct: 214 CLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTIS 273
Query: 363 YNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEAL 509
+NE+I+G AQFG IE A++IL M +PNSSSWN+++TGYV+R T EAL
Sbjct: 274 FNELINGYAQFGDIEYAVEILSKMDSPNSSSWNAVLTGYVDRDETWEAL 322
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Frame = +3
Query: 12 KALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLI 191
+AL+ ++ D D ++ ++ LS LS L+ G +IH I K G+ S +V + LI
Sbjct: 320 EALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALI 379
Query: 192 DMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EPDN 356
MY KCG V + F + +N +SWN++I+ A G+ + + L + + +PDN
Sbjct: 380 SMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKMTKDVKPDN 439
Query: 357 ISYNEVI 377
I++ ++
Sbjct: 440 ITFLNIL 446
Score = 58.2 bits (139), Expect = 1e-06
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 39/189 (20%)
Frame = +3
Query: 57 PDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEESIRA 236
P+ Y+L + AC +L G +HS I++ G A +V V +++ Y K + + +
Sbjct: 71 PNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIKTESFDSAHKL 130
Query: 237 FSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNI--SYNEVI----SG----- 383
F EM + ++WNS+I+ G+ +AL L + N+ SY+ I SG
Sbjct: 131 FDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSLSIALSASGHLGWL 190
Query: 384 -------------------------IAQFGK---IEDAIDILFAMANPNSSSWNSIITGY 479
I +GK E A+++ M ++ SWNS+I
Sbjct: 191 ILGQSIHSKVIKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAAS 250
Query: 480 VNRSRTAEA 506
R +A
Sbjct: 251 ARNGRLEQA 259
>ref|XP_004511691.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Cicer arietinum]
Length = 525
Score = 195 bits (496), Expect = 5e-48
Identities = 99/171 (57%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
KF+KAL+L + L ++ D +S T+A++AC LSLL+LG SIHSK VKLG+A +VAN
Sbjct: 87 KFQKALSLFINLERSQICADTFSFTSAMAACAPLSLLKLGSSIHSKTVKLGMANDTVVAN 146
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRN-TISWNSIIAANARKGRLGQALSLLQTMPEPDNI 359
CLI+MYGKCG VE ++R FS++ D++ ISWNS+IAA A G + LQ MP P+ I
Sbjct: 147 CLINMYGKCGSVEPAVRIFSDIADKDDVISWNSVIAACANNGNIELGYKFLQLMPNPNGI 206
Query: 360 SYNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
SYN +I+GIAQ GKIEDA+ IL M PNSSSWNSIITG+VNR+R EAL+
Sbjct: 207 SYNGLINGIAQAGKIEDAVWILSTMPCPNSSSWNSIITGFVNRNRVQEALD 257
Score = 77.8 bits (190), Expect = 1e-12
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
+ ++AL++ ++ + D ++ + L+ LS L G +IH VK GV V+V
Sbjct: 251 RVQEALDMFGKMHLRNLPMDEFTFSIILNGIASLSALTWGMTIHCCTVKYGVDSCVVVGT 310
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----E 347
LIDMY KCG + F+ + +RN ISWN++++ AR G Q SL +++ E
Sbjct: 311 ALIDMYSKCGRANNAESIFNVLPNRNLISWNAMLSGYARNGDFAQVSSLFESLKMERDIE 370
Query: 348 PDNISYNEVISGIAQFG-KIEDAIDILFAMAN 440
PD I++ +IS + E AI AM N
Sbjct: 371 PDGITFLNLISACSHNQIPFETAIRYFDAMMN 402
>ref|XP_003538739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Glycine max]
Length = 585
Score = 191 bits (485), Expect = 9e-47
Identities = 90/170 (52%), Positives = 125/170 (73%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
+FR AL+ L ++ DA S T+ALSAC LSL +LG SIH KIVK+G+A +VAN
Sbjct: 147 QFRNALSFFTLLDRSHVCADAVSFTSALSACSLLSLFKLGSSIHCKIVKVGMADGTVVAN 206
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNIS 362
CLI MYGKCG +E ++R FS+ ++++ ISWNS+IAA+A G + A L MP PD +S
Sbjct: 207 CLIVMYGKCGSLERAVRIFSQTIEKDVISWNSVIAASANNGDIELAYKFLHLMPNPDTVS 266
Query: 363 YNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
YN +I+GIA+FG ++DA+ +L ++ +PNSSSWNS+ITG+VNR+R EAL+
Sbjct: 267 YNGLINGIAKFGNMDDAVQVLSSLPSPNSSSWNSVITGFVNRNRAREALD 316
Score = 69.7 bits (169), Expect = 4e-10
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 6/130 (4%)
Frame = +3
Query: 9 RKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCL 188
R+AL++ ++ + D ++ + L+ LS L G IH +K G+ SV V + L
Sbjct: 312 REALDIFRKMHLRNVEMDEFTFSIILTGIAGLSALTWGMLIHCCTIKCGLDASVFVGSAL 371
Query: 189 IDMYGKCGEVEESIRAF-SEMVDRNTISWNSIIAANARKGRLGQALSLLQTMP-----EP 350
IDMY KCG+V+ + F + ++N +SWN++++ AR G + + L Q++ +P
Sbjct: 372 IDMYSKCGQVKNAESIFVHALPNKNLVSWNAMLSGYARNGDSVRVIHLFQSLKMEREIKP 431
Query: 351 DNISYNEVIS 380
D I++ +IS
Sbjct: 432 DGITFLNLIS 441
>ref|XP_006398443.1| hypothetical protein EUTSA_v10000835mg [Eutrema salsugineum]
gi|557099532|gb|ESQ39896.1| hypothetical protein
EUTSA_v10000835mg [Eutrema salsugineum]
Length = 572
Score = 173 bits (438), Expect = 2e-41
Identities = 82/171 (47%), Positives = 120/171 (70%), Gaps = 1/171 (0%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVAC-SVIVA 179
+F + L+L L+L ++D +P+ +S T+AL+AC RL L +LG IHSKIVKLG+ +VIV
Sbjct: 132 RFHEGLSLFLELHRSDVFPNEFSFTSALAACARLKLSRLGACIHSKIVKLGIEKGNVIVG 191
Query: 180 NCLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNI 359
NCLIDMYGKCG +++++ F M +++T+SWN+I+A+ +R G+L L MP PD +
Sbjct: 192 NCLIDMYGKCGSMDDAVLVFQFMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTV 251
Query: 360 SYNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
+YNE+I + G +A IL +M NPNSSSWN+I+TGYVN + EA +
Sbjct: 252 TYNELIDAFVKSGDFINAFQILSSMPNPNSSSWNTILTGYVNGDQFGEATD 302
Score = 75.9 bits (185), Expect = 5e-12
Identities = 42/131 (32%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
+F +A + ++ + D YSL+ L+A L+++ G IHS +KLG+ V+VA+
Sbjct: 296 QFGEATDFFTKMHSSGVRFDEYSLSIVLAAIADLAVVPWGSLIHSCALKLGLESRVVVAS 355
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPE----- 347
LIDMY KCG ++ + F +M +N I+WN++IA AR G +A+ L + +
Sbjct: 356 ALIDMYSKCGMLKHAQLMFWKMPRKNLIAWNAMIAGYARNGDSTEAMKLFNQLKQERFLK 415
Query: 348 PDNISYNEVIS 380
PD ++ +++
Sbjct: 416 PDRFTFLNLLA 426
>ref|NP_199557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170446|sp|Q9FGL1.1|PP423_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g47460 gi|9758774|dbj|BAB09072.1|
selenium-binding protein-like [Arabidopsis thaliana]
gi|332008139|gb|AED95522.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 172 bits (435), Expect = 5e-41
Identities = 80/171 (46%), Positives = 119/171 (69%), Gaps = 1/171 (0%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVAC-SVIVA 179
+F++ + L L+L ++D +P+ +S TAAL+AC RL L LG IHSK+VKLG+ +V+V
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 180 NCLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNI 359
NCLIDMYGKCG +++++ F M +++T+SWN+I+A+ +R G+L L MP PD +
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTV 255
Query: 360 SYNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
+YNE+I + G +A +L M NPNSSSWN+I+TGYVN ++ EA E
Sbjct: 256 TYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATE 306
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Frame = +3
Query: 60 DAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEESIRAF 239
D YSL+ L+A L+++ G IH+ KLG+ V+VA+ LIDMY KCG ++ + F
Sbjct: 319 DEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMF 378
Query: 240 SEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPE-----PDNISYNEVIS 380
M +N I WN +I+ AR G +A+ L + + PD ++ +++
Sbjct: 379 WTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLA 430
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = +3
Query: 57 PDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEESIRA 236
PDA L L G + L + +H + K G + ++N L+ Y +E++ +
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112
Query: 237 FSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPE----PDNISYNEVISGIAQ 392
F EM D + ISWNS+++ + GR + + L + P+ S+ ++ A+
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACAR 168
>ref|XP_006282278.1| hypothetical protein CARUB_v10028562mg [Capsella rubella]
gi|482550982|gb|EOA15176.1| hypothetical protein
CARUB_v10028562mg [Capsella rubella]
Length = 579
Score = 170 bits (430), Expect = 2e-40
Identities = 79/171 (46%), Positives = 118/171 (69%), Gaps = 1/171 (0%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVAC-SVIVA 179
+F++ L L L+L ++D +P+ +S TAAL+AC RL ++LG IHSKIVKLG+ +V+V
Sbjct: 139 RFQEGLCLFLELHRSDVFPNEFSFTAALAACSRLRFMRLGACIHSKIVKLGIEKGNVVVG 198
Query: 180 NCLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNI 359
NCLIDMYGKCG +++++ F M +++T+SWN+I+A+ +R L L MP PD +
Sbjct: 199 NCLIDMYGKCGCMDDAVLVFQHMEEKDTVSWNAIVASCSRNDELELGLWFFHQMPNPDTV 258
Query: 360 SYNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
+YNE+I + +A ++L M NPNSSSWN+I+TGYVN ++ EA E
Sbjct: 259 TYNEIIDAFVKSRDFNNAFEVLLDMPNPNSSSWNTILTGYVNSEQSGEATE 309
Score = 72.8 bits (177), Expect = 4e-11
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Frame = +3
Query: 60 DAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEESIRAF 239
D YSL+ L++ L+++ G IHS +KLG+ V+VA+ L+DMY KCG ++++ F
Sbjct: 322 DEYSLSVVLASIATLAVVPWGSLIHSCALKLGLDSRVVVASALVDMYSKCGMLKDAEVIF 381
Query: 240 SEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPE-----PDNISYNEVIS 380
M +N I+WN++I+A AR G A+ L + + PD ++ +++
Sbjct: 382 WTMPRKNLIAWNAMISAYARNGDSTGAIKLFNRLKQERFMKPDRFTFLNLLA 433
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = +3
Query: 57 PDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEESIRA 236
PDA L L G + L + +H ++K G V+N L+ Y +E++ +
Sbjct: 56 PDASPLVHLLRVSGNYGYVSLCQQLHGYVIKHGFVSDTRVSNSLMRSYKTSDSLEDAHKL 115
Query: 237 FSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPD 353
F EM + + ISWNS+++ + GR + L L + D
Sbjct: 116 FDEMPEPDVISWNSLVSGYVQSGRFQEGLCLFLELHRSD 154
>ref|XP_002863342.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297309177|gb|EFH39601.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 576
Score = 166 bits (419), Expect = 4e-39
Identities = 80/171 (46%), Positives = 116/171 (67%), Gaps = 1/171 (0%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVAC-SVIVA 179
+F++ L L L+L ++D P+ +S TAAL+AC RL L LG IHSKIVKLG+ +V+V
Sbjct: 136 RFQEGLCLFLKLHRSDVLPNEFSFTAALAACARLHLWPLGACIHSKIVKLGLEKGNVVVG 195
Query: 180 NCLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNI 359
NCLIDMYGKC +++++ F M +++T+SWN+I+A+ +R G+L L MP PD +
Sbjct: 196 NCLIDMYGKCASMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTV 255
Query: 360 SYNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEALE 512
+YNE+I + G +A +L M N NSSSWN+I+TGYVN ++ EA E
Sbjct: 256 TYNELIYAFVKSGDFNNAFQVLSDMPNRNSSSWNTILTGYVNSEQSGEATE 306
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Frame = +3
Query: 60 DAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEESIRAF 239
D YSL+ L+A L+++ G IH+ +KLG+ V+VA+ LIDMY KCG ++ + F
Sbjct: 319 DEYSLSIVLAAIAALAVVPWGSLIHACALKLGLDSRVVVASALIDMYSKCGMLKHAELMF 378
Query: 240 SEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPE-----PDNISYNEVIS 380
M +N I WN++I+ AR G +A+ L + + PD ++ +++
Sbjct: 379 WTMPRKNLIMWNAMISGYARNGDSIEAIKLFNQLKQERFMKPDRFTFLNLLA 430
>gb|ABD65008.1| PPR repeat containing protein [Brassica oleracea]
Length = 583
Score = 160 bits (406), Expect = 1e-37
Identities = 77/169 (45%), Positives = 113/169 (66%), Gaps = 1/169 (0%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVAC-SVIVA 179
+ ++ L L L L +++ +P+ +S TAAL+AC RL + LG IHSKIVKLG+ +V+V
Sbjct: 143 RLQEGLCLFLDLERSNVFPNEFSFTAALAACARLKISWLGACIHSKIVKLGMEKGNVVVG 202
Query: 180 NCLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNI 359
NCLIDMYGKCG +++++ F M +++T+SWN+I+A+ +R +L L MP PD +
Sbjct: 203 NCLIDMYGKCGSMDDAVLVFRHMEEKDTVSWNAIVASCSRNRKLELGLWFFHQMPNPDTV 262
Query: 360 SYNEVISGIAQFGKIEDAIDILFAMANPNSSSWNSIITGYVNRSRTAEA 506
+YNE+I + A IL M NPNSSSWN+I+TGYVN ++ EA
Sbjct: 263 TYNELIDAFVKSEDFNSAFQILSCMPNPNSSSWNTILTGYVNSEQSREA 311
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Frame = +3
Query: 60 DAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEESIRAF 239
D YSL+ L+A L ++ G+ IHS +KLG+ V+VA+ LIDMY KCG ++++ F
Sbjct: 326 DEYSLSIVLAAIAALVVVPWGRVIHSCGLKLGLDSRVVVASALIDMYSKCGMLKQAELMF 385
Query: 240 SEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPE-----PDNISYNEVIS 380
M +N I+WN++I AR G +A+ L + + PD I++ +++
Sbjct: 386 WTMPRKNLIAWNAMIYGYARNGDSTEAIKLFSQLKQERFLKPDGITFLNLLA 437
Score = 55.8 bits (133), Expect = 6e-06
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 42/205 (20%)
Frame = +3
Query: 15 ALNLLLQLGKADHYPDAYS--LTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCL 188
AL+ ++L PD S + L G + L + +H +VK G ++N L
Sbjct: 44 ALHAAVELLNDGDKPDDTSSVMVHLLRVSGNHGYVSLCRQLHGYVVKHGYVSETRLSNSL 103
Query: 189 IDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPE----PDN 356
+ Y +E++ R F EM D + ISWNS+++ + GRL + L L + P+
Sbjct: 104 MRFYKTSDSLEDAHRLFDEMPDPDVISWNSLVSGYVQSGRLQEGLCLFLDLERSNVFPNE 163
Query: 357 ISYNEVISGIAQF------------------------------------GKIEDAIDILF 428
S+ ++ A+ G ++DA+ +
Sbjct: 164 FSFTAALAACARLKISWLGACIHSKIVKLGMEKGNVVVGNCLIDMYGKCGSMDDAVLVFR 223
Query: 429 AMANPNSSSWNSIITGYVNRSRTAE 503
M ++ SWN+I+ +R+R E
Sbjct: 224 HMEEKDTVSWNAIVAS-CSRNRKLE 247
>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 126 bits (317), Expect = 3e-27
Identities = 63/156 (40%), Positives = 92/156 (58%), Gaps = 2/156 (1%)
Frame = +3
Query: 48 DHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVANCLIDMYGKCGEVEES 227
D PD+++L L C RL LQ GK IH ++K+G V + L+ MY KCGE+E
Sbjct: 109 DFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELC 168
Query: 228 IRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTMPEPDNISYNEVISGIAQFGKIE 407
+ F M D++ +SWNS+I AR G + AL + + MPE D+ S+ +I G+++ GK+E
Sbjct: 169 RKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLE 228
Query: 408 DAIDILFAMANPNSSSWNSIITGYVNR--SRTAEAL 509
A D+ M NS SWN++I GY+ S TA+ L
Sbjct: 229 AARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKEL 264
Score = 69.7 bits (169), Expect = 4e-10
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Frame = +3
Query: 3 KFRKALNLLLQLGKADHYPDAYSLTAALSACGRLSLLQLGKSIHSKIVKLGVACSVIVAN 182
+F KAL L + + D P+ ++ A+SA + L G+ +HS IVK G ++
Sbjct: 288 QFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGT 347
Query: 183 CLIDMYGKCGEVEESIRAFSEMVDRNTISWNSIIAANARKGRLGQALSLLQTM----PEP 350
LI+MY KCG V+ ++R F + + W S+I G + Q L L M +P
Sbjct: 348 LLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKP 407
Query: 351 DNISYNEVISGIAQFGKIEDA 413
I++ V++ + G EDA
Sbjct: 408 HAITFIGVLNACSHAGFAEDA 428