BLASTX nr result

ID: Rauwolfia21_contig00042474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00042474
         (317 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB60132.1| hypothetical protein L484_013397 [Morus notabilis]      69   5e-10
ref|XP_002302700.1| hypothetical protein POPTR_0002s18660g [Popu...    57   2e-06
ref|XP_006482021.1| PREDICTED: Werner Syndrome-like exonuclease-...    55   7e-06
ref|XP_006430484.1| hypothetical protein CICLE_v10012747mg [Citr...    55   7e-06
ref|XP_004136636.1| PREDICTED: Werner Syndrome-like exonuclease-...    55   7e-06
gb|ADN33882.1| 3'-5' exonuclease [Cucumis melo subsp. melo]            55   1e-05

>gb|EXB60132.1| hypothetical protein L484_013397 [Morus notabilis]
          Length = 263

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
 Frame = +2

Query: 2   GLSAEHSVNYRYGNFVYPAS--KAKEAPYEILQICVGNRCLICEPCESNAIC-------- 151
           GL A+ S+NY  G  V  ++    K+ PYE+LQICVGN C++C     + IC        
Sbjct: 59  GLCADRSLNYANGTHVSHSTGVSLKDHPYELLQICVGNHCVMC--TMDSTICSWGGKWFP 116

Query: 152 KALRELLSDNKAIVFGVGMEVVAKKIEKDFG 244
           KAL++LL D    V GVG++   KK+EKD+G
Sbjct: 117 KALKDLLHDGGVTVVGVGIDKFGKKMEKDYG 147


>ref|XP_002302700.1| hypothetical protein POPTR_0002s18660g [Populus trichocarpa]
           gi|222844426|gb|EEE81973.1| hypothetical protein
           POPTR_0002s18660g [Populus trichocarpa]
          Length = 274

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
 Frame = +2

Query: 59  SKAKE--APYEILQICVGNRCLICE--PCESNAICKALRELLSDNKAIVFGVGMEVVAKK 226
           SK  E   PY IL  CVG+ CLI      E    CK+LR+  S+ K I  GV ++ VAK+
Sbjct: 79  SKGSENYCPYNILPRCVGSHCLIYHLPHPECYHTCKSLRDFFSNPKVIAVGVSIKPVAKQ 138

Query: 227 IEKDFGVNFSKTWDLRKL 280
           +EK+F + F K  D+ +L
Sbjct: 139 LEKEFEIKFEKVIDVHEL 156


>ref|XP_006482021.1| PREDICTED: Werner Syndrome-like exonuclease-like [Citrus sinensis]
          Length = 211

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/76 (36%), Positives = 43/76 (56%)
 Frame = +2

Query: 53  PASKAKEAPYEILQICVGNRCLICEPCESNAICKALRELLSDNKAIVFGVGMEVVAKKIE 232
           P+   ++ P   LQ+CVG RCLI +   +  I ++L   LSD      GVG++   KK+E
Sbjct: 66  PSFSRQQNPVATLQLCVGRRCLIFQIIHARRIPQSLANFLSDEDYTFVGVGIDGDVKKLE 125

Query: 233 KDFGVNFSKTWDLRKL 280
            ++G+   +T DLR L
Sbjct: 126 NNYGLQVFRTVDLRPL 141


>ref|XP_006430484.1| hypothetical protein CICLE_v10012747mg [Citrus clementina]
           gi|557532541|gb|ESR43724.1| hypothetical protein
           CICLE_v10012747mg [Citrus clementina]
          Length = 211

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/76 (36%), Positives = 43/76 (56%)
 Frame = +2

Query: 53  PASKAKEAPYEILQICVGNRCLICEPCESNAICKALRELLSDNKAIVFGVGMEVVAKKIE 232
           P+   ++ P   LQ+CVG RCLI +   +  I ++L   LSD      GVG++   KK+E
Sbjct: 66  PSFSRQQNPVATLQLCVGRRCLIFQIIHARRIPQSLANFLSDEDYTFVGVGIDGDVKKLE 125

Query: 233 KDFGVNFSKTWDLRKL 280
            ++G+   +T DLR L
Sbjct: 126 NNYGLQVFRTVDLRPL 141


>ref|XP_004136636.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
           gi|449506001|ref|XP_004162625.1| PREDICTED: Werner
           Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 209

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/78 (35%), Positives = 43/78 (55%)
 Frame = +2

Query: 53  PASKAKEAPYEILQICVGNRCLICEPCESNAICKALRELLSDNKAIVFGVGMEVVAKKIE 232
           P +++ + P   LQ+C+G RCLI +      I K+L E L +      GVG++  A+K+ 
Sbjct: 64  PNNRSYDNPVATLQLCIGRRCLILQLLHMPEIPKSLFEFLENESFTFVGVGIDEDAEKLN 123

Query: 233 KDFGVNFSKTWDLRKLVE 286
            D+G+   K  DLR L E
Sbjct: 124 CDYGLKVGKRMDLRDLAE 141


>gb|ADN33882.1| 3'-5' exonuclease [Cucumis melo subsp. melo]
          Length = 209

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/78 (35%), Positives = 43/78 (55%)
 Frame = +2

Query: 53  PASKAKEAPYEILQICVGNRCLICEPCESNAICKALRELLSDNKAIVFGVGMEVVAKKIE 232
           P +++ + P   LQ+C+G RCLI +      I K+L E L +      GVG++  A+K+ 
Sbjct: 64  PNNRSYDNPVATLQLCIGRRCLILQLLHIPEIPKSLFEFLENESFTFVGVGIDEDAEKLN 123

Query: 233 KDFGVNFSKTWDLRKLVE 286
            D+G+   K  DLR L E
Sbjct: 124 CDYGLKVGKRMDLRDLAE 141


Top